Vidua macroura (Pin-tailed whydah): 128807345
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Entry
128807345 CDS
T11570
Symbol
ARID2
Name
(RefSeq) AT-rich interactive domain-containing protein 2
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
vmc Vidua macroura (Pin-tailed whydah)
Pathway
vmc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128807345 (ARID2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vmc03000
]
128807345 (ARID2)
03021 Transcription machinery [BR:
vmc03021
]
128807345 (ARID2)
03036 Chromosome and associated proteins [BR:
vmc03036
]
128807345 (ARID2)
Transcription factors [BR:
vmc03000
]
Eukaryotic type
Helix-turn-helix
ARID
128807345 (ARID2)
Transcription machinery [BR:
vmc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
128807345 (ARID2)
Chromosome and associated proteins [BR:
vmc03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
128807345 (ARID2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
TSTD2_N
DUF5532
Motif
Other DBs
NCBI-GeneID:
128807345
NCBI-ProteinID:
XP_053833639
LinkDB
All DBs
Position
5:complement(43707276..43800312)
Genome browser
AA seq
1825 aa
AA seq
DB search
MANSTGKNHADQRRKGLAFLDELRQFHHSRGSPFKKIPVVGGKELDLHALYTRVTTLGGF
GKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEEDDEVQPGNPKP
QLPIGAIPTSYNYQQHSVSDYLRQSYGLSMDLNSPNDYNKLVLSLLSGLPNEVDFAINVC
TLLSNESKHVMQLEKDPKIITLLLANAGVFDDTLGSFSAVFGEEWKEKTDRDFVKFWKDI
VEDIEVRDLISDRSKSQDIPSEEWIWESLFHPPRKLGINDIEGQRVLQIAVILRNLSFEE
GNVKLLAANRTCLRFLLLSAHSHFISLRQLGLDTLGNIAAELLLDPVDFKTTHLMFHTVT
KCLMSRDRFLKMRGMEILANLCKAEDNGVLICEYVDQESYKEIICHLTLPDVLLVISALE
VLYMLTEMGEVACSKIAKVEKSIDTLVCLVSMDIQMFGPDALTAVKLIEHQCVSQQGILD
VRPQVMDHGSSQAHATGVPASRTAPHVAPPPGIVEIDSEKFACQWLNAHFEVNLDCSVSR
AEMYSEYLSTCSKLARGGILTSTGFYKCLRTVFPNHTVKRVEDPSNNGQAHIHVVGVKRR
AIPLPIQMYYQQPPTSSTPVVRVDSIPDVSSSPLPAGIPHGLPSVGNHYQRTPINQSSTL
TATQMSFPIQGVHTVAQTVSRIPQNPSIHTQQNAPMTVIQNKGPISCEVVKAAVIQSSVP
QSAVPVPIAVGGASNQNHSTTGQQPSVTVVSSQMLHHQPVIQQQSPLHAVVPGQIPSGTP
VTVIQQAVPQGHIFGRVQNLPACSSAVSQGQQLISTSSQPGQTSSQQSSVGNQQQDTVII
APQQYVTTSASNIVSATTVQNFQVAAGQVVTIAGVQNPPTSRVGFQNIAPKPLPSQQGPP
PVGQQPQQQPPPPSQQSVVIVSQPAQQGQTYAPAIHQIVLANPASIPAGQTVQLAGQPSI
TPSSSPSPGPVTNNQVPTVMSSSSTTPQSQGPPPTVSQMLSVKRQQQQQHSPASSQQQVQ
VQQSMQMQVQSQQANTGVGQPNSGESSLIKQLLLPKRGPSTPGGKLILPAPQIPPPNNAR
APSPQVVYQMANNQTPGFGVQGQSPAQQLLVGQQNVQLVPGAIPPQGAVQTVPISNLQIL
PGQLISNSPATIFQGTTGNQVTITVVPNTSFATATVSQGSATQIIAPAGISVSGAQTGVG
LQVQTLPATQAPSAGQSPCTAAPPFKGDKIICQKEEEAKEATGLHIHERKIEVMENPSCR
RGSANTSNGDAKENEMQVGSLLNGRKYSDSSLPPSNSGKIQNEANQCSQVSNGPSLEMGE
NGAPGKQNFEQMDTQEIKSDLKKPLVNGICDFDKGDCSHLSKNIPNHKTSNHVGNGEISS
VEQQGNFDATQQDTAKGDQGERISNGPVLTLSSSPVVSGTQEAAKLLTQQLSGTNTDLPN
GPLASSLNSDVPQQRPSVVVSPQSTASVIQGHQIIAVPHSGPRVSQSTLSSEVRSTNGTA
ECKTAKRPAEDNDRETVPGIPNKVGVRIVTISDPNNAGCSATMVAVPAGADPSTVAKVAI
ESAVQQKQQHPTTYIQSMVTQSTPATSIPTVQVQGQQMNLQPPSYTAASQHAEQMKKPGQ
NFMCLWQSCKKWFQTPSQVFYHAATEHGGKDVYPGQCLWEGCEPFQRQRFSFITHLQDKH
CSRDALLAGLKQDEHGQAGNQKPSNKQPAAGATASTPRAQKAIVNHPSAALMALRRGSRN
LVFRDFTDEKEGPITKHIRLTAALILKNIGKYSECGCRLLKRHENHLSVLAISNMEASST
LAKCLYELNFTVQSKEHEKDSEMLQ
NT seq
5478 nt
NT seq
+upstream
nt +downstream
nt
atggcaaattcgacgggtaaaaaccacgcagaccagcggagaaagggactcgctttcctg
gacgagctgcggcagtttcaccacagcagagggtctccttttaagaagatccccgtggtg
ggtgggaaggagctggatcttcacgctctctataccagagtcaccactttaggcggattt
gggaaggtatcagagaagaatcagtggggagaaattgtagaagagtttaactttcccaga
agttgttctaatgctgccttcgctttaaaacagtattacttgcgttatctagaaaagtat
gaaaaagtccatcattttggggaggaggatgatgaggtacaaccaggcaatccaaagcca
caacttcctattggtgcaattccaacttcctataactaccagcaacacagcgtgtcagat
tatcttcgtcaaagctatgggctgtctatggacttaaactcaccaaatgactataataag
ttggtgctttcactgttatctggactcccaaatgaagtggactttgcaattaatgtgtgt
actcttctttcaaatgaaagcaagcatgttatgcagcttgaaaaggaccctaaaatcatc
actttactgcttgcaaatgctggggtgtttgatgacactttaggatcattttctgctgta
tttggagaagagtggaaggagaaaactgatagagattttgttaagttttggaaggatatt
gttgaggatattgaagttcgtgatctaatttctgacagaagcaaatctcaagatattcca
tcagaagaatggatttgggaatccttatttcatccacctcgcaaattgggcattaatgat
attgaagggcagcgggtacttcagatagcagtgattttacgaaatctttcttttgaagag
ggaaacgttaaacttctggcagctaatcgtacttgtcttcggttcctgctactctctgct
cacagtcactttatttctctacggcagttgggacttgacacactgggaaatattgcagca
gagcttcttttggatcctgttgatttcaaaactactcatctaatgttccacactgttaca
aaatgcctcatgtcaagggatagatttttaaaaatgagaggcatggaaatcttggcaaat
ctttgcaaggctgaagataatggtgtcttaatttgtgaatatgtggatcaagaatcctat
aaagagatcatatgtcatctcacactaccagatgtgctgcttgtaatctcagcacttgag
gtgctatacatgctcacagaaatgggagaagtggcctgctcaaagattgctaaagtagag
aagagcatagatacattagtatgtctggtttctatggacatccagatgtttggacctgat
gctcttactgctgtaaagctcattgaacatcagtgtgttagccagcaaggaatacttgat
gtaagaccacaagtaatggatcatggttcttcacaggcccatgcaacaggtgtccccgcc
tctaggacagcaccacatgttgctccacctccaggaatagtagaaatagacagcgagaaa
tttgcatgtcaatggttgaatgcccattttgaagtgaaccttgattgctcagtctctcga
gcagaaatgtactctgaatacctctctacttgtagtaaattagctcgaggtggaatccta
acatcaactggattttataaatgcctgcgaactgtctttccaaatcataccgtgaagaga
gtagaagatccaagtaacaatggtcaagcacatatacatgtggtaggagtgaagaggaga
gctataccacttcccattcagatgtactatcagcagccaccaacttcgtctaccccagtt
gtccgggttgattcaattcctgatgtgtcttcgtctcctttgccagcaggaatcccacat
gggctaccaagtgtaggaaatcactatcagaggacccctattaaccagtcttcaactttg
acagcaactcagatgtcttttccaattcaaggtgttcacactgtggcacagactgtttct
agaattccacaaaatccttctattcatacacaacaaaatgctccaatgactgttatacag
aataaaggtccaatatcctgtgaagtagtgaaggctgcagtaatacagagctctgttcct
cagtctgcagttcctgttcctattgcagtaggaggagcttctaatcaaaatcacagcacc
acaggccagcagccgtctgttacagttgtgagttctcagatgcttcaccaccaacctgta
attcaacaacagtccccactgcacgcagtggtaccaggacagataccttcaggcactcct
gttacggtaattcagcaagctgtacctcagggtcatatatttggcagagtacaaaactta
ccagcatgcagttcagcagtttcacagggtcaacagctaatcagcacatcatcacaaccc
gggcagacatcatctcagcagtcctctgtgggtaaccagcaacaagatacagtcatcata
gcaccacagcagtatgtcacaacctctgcatctaacattgtttctgccaccacagttcag
aatttccaagtagcagctgggcaggtggttacaattgcaggtgttcagaacccaccaaca
tctagagtagggtttcagaatattgcaccaaagcctctgccgtctcagcaaggtccacct
cctgtggggcagcagccacagcagcagcctccaccaccatcccagcaaagtgtagtgata
gtaagccagccagctcagcaaggtcagacatacgcaccagccattcatcaaattgtgctt
gctaacccagcttctattcctgctggccaaactgtccagttggctggacagccgagcatt
actccatcatcttcaccatcccctggtccagttacaaataatcaagtccctacagttatg
tcatcttcatctaccactcctcagtcacaaggaccccctcctactgttagccagatgctt
tctgtaaagaggcagcagcagcagcaacattcaccagcatcatcgcagcagcaggtacag
gtacaacaatcgatgcaaatgcaagttcagtcacaacaagctaatacgggagttggccag
cccaactctggtgagtctagtctgataaaacaactgcttcttccaaaaagaggcccctca
actccaggggggaagcttatactcccagctccacagattcctccacctaacaatgcaaga
gctcctagccctcaggtggtttatcagatggccaataaccagacaccaggttttggagtt
caaggacagtctccagctcagcagctgctagttggacagcaaaatgttcagctggtcccg
ggtgcaatcccgccccaaggggcagtgcaaacagtacccatttctaatttacagatattg
ccaggccagttgatctcaaacagcccagcaactattttccaagggactactggcaaccag
gttacgataacagttgtgccaaatacgagttttgctactgcaactgtgagtcagggaagt
gcaactcagataattgctccagcaggaatttcagtgagtggagcacagacaggagttggg
ctacaggtgcaaacccttccagctactcaagcaccttcagctggacaatcaccatgtact
gctgctcccccattcaaaggtgataaaataatttgccaaaaggaggaagaagcaaaggaa
gcaacaggtttacacattcatgaacgtaaaattgaagttatggagaatccttcctgccga
agaggatctgcaaacaccagcaatggggatgcaaaagaaaatgaaatgcaggtgggaagt
cttttaaatgggagaaagtatagtgactccagtctacctccttctaactcagggaaaata
cagaatgaggccaatcagtgctcacaagtcagtaatgggccatcattagaaatgggtgag
aacggagctcctggaaagcagaactttgaacaaatggacacacaggaaattaaaagtgat
ttgaagaagcccctagttaatggaatctgtgattttgataaaggagattgttctcatttg
agcaaaaacattccaaatcacaaaacttccaatcatgtaggaaatggtgagatatcttca
gtggaacaacaagggaatttcgatgccacgcagcaagatacagccaaaggtgatcaaggg
gaaagaatttctaatgggcctgtattaactttgagtagttcacctgttgtaagcggtaca
caggaggctgcaaaactgttaacccagcaacttagtggtaccaacactgatttacctaat
ggacctctagcttcaagtttgaattcagatgtgcctcagcaacgcccaagtgtagttgtc
tcaccacaatctacagcctctgttatacaggggcatcaaatcatagcagttccacactca
ggacctagagtgtcccagtctaccctgtcctccgaagttcggtctactaatggcacagca
gaatgcaaaactgcaaagaggccagcagaggataatgacagggaaactgttccaggaatt
ccaaataaagtaggagttagaattgttacaatcagtgaccccaacaatgctggttgcagt
gcaactatggttgctgtgccagctggagcggatccaagcactgtagcgaaagtagcaata
gaaagtgctgttcaacaaaagcagcagcatccaaccacgtatatacaaagcatggtcaca
cagagcacacctgcaacatcgataccaacagttcaagtacagggccagcagatgaatttg
cagccaccttcatacactgcagcaagtcaacatgcagagcaaatgaaaaaacctggacag
aacttcatgtgtctgtggcaatcttgtaaaaagtggtttcagacaccatcacaggttttc
tatcatgcagcaaccgaacatggaggaaaagatgtctacccagggcagtgcttatgggag
ggatgtgaacctttccagcggcagaggttttccttcattacgcatttacaggataagcac
tgttccagagatgctttgcttgcaggattaaagcaagatgaacatggacaagcaggaaat
cagaagccttccaataagcagccagctgcaggggctactgcttctactcccagagcacag
aaggccattgtgaatcatccaagtgctgccctaatggcattaaggagaggatcaagaaac
cttgtcttcagagatttcacagatgaaaaagagggaccaataactaaacacatccgatta
acagctgccttaatattaaaaaatattggtaaatattcagaatgtggttgcaggttgcta
aaaagacatgaaaatcatctatcagtgctagccattagtaatatggaagcttcctccaca
cttgccaaatgcctttatgaacttaattttactgtccagagtaaagaacatgaaaaagac
tctgagatgctgcagtga
DBGET
integrated database retrieval system
