Vidua macroura (Pin-tailed whydah): 128807359
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Entry
128807359 CDS
T11570
Symbol
PARPBP
Name
(RefSeq) PCNA-interacting partner isoform X1
KO
K27412
PCNA-interacting partner
Organism
vmc Vidua macroura (Pin-tailed whydah)
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vmc03400
]
128807359 (PARPBP)
DNA repair and recombination proteins [BR:
vmc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
128807359 (PARPBP)
TLS (translesion DNA synthesis) factors
Other TLS factors
128807359 (PARPBP)
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Ortholog
Paralog
GFIT
Motif
Pfam:
PARI_N
UvrD_C
AFAP_N
Transposase_23
Motif
Other DBs
NCBI-GeneID:
128807359
NCBI-ProteinID:
XP_053833674
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Position
5:complement(24377020..24666175)
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AA seq
621 aa
AA seq
DB search
MGATGLKHPHRHSSECIVNAESTEDTLKLLLETKAAIFVMAFLYVGIMYKEIWTMVTFQQ
KILHLVKCFRRQWPLFSNSERTTVCGADCMLMALQLSMAEVNKQHHGDFTVSLSDVLEMW
NYLLHDKLGLYENMNEPENYADVKKAYHAFLARSNMLDLIDIYQKCSSLGLLAEDEIISP
VQLLEFISGVMNAQENNGSILSTPIQINRQGQEHMKVTILAKKFVCSYLSLLVNSKDDLA
LAHILNVPDRGLGREAFTNLKHASQERKMSIFLMATSFIRTIELGGRDSASSMYDLLRAH
VKGLSNFVNFIDKLQEIVGEVLNTRIAGGRILSTVKMHLIKGRSNGDPFCEAVEEAVQDL
DLKIKNIIDSQQETLTASTTGVSPARPKLHSINHGTAYCGRDTVKVLLVLLDEEAVSPPT
QNKADLLCDSESLNLCGITSVLTLFRSPARSNGSSPKPLGQRILKCMDEKVIKMKQSSIK
SQFACTYKNDLSEKSGQHSHAIPTCKHPVPKQHLKAGKSTGLGTISESVHQTRSYTEMGK
LSCQPRNKNSENEQMDLNNDKIICDKESEPSLQKNTKRLKTSNSFKKELDSKIGGKRKQT
KTASKNKLIAGQAKLTHFFQL
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgggagcgacaggtttaaagcatcctcatagacactcatctgaatgtatagtgaatgca
gaaagtactgaagacactctgaagctgcttttggagacaaaggctgccatatttgtgatg
gcattcctttatgttggcataatgtacaaagaaatctggacaatggttacttttcagcaa
aaaattttacacttggtcaagtgtttcagaagacaatggcctttattttccaactctgaa
aggactactgtgtgtggagcagactgcatgttgatggcgttacaactgtccatggctgaa
gtcaataaacagcaccatggagacttcacagtatcactcagtgatgttttggagatgtgg
aactacttgttacatgacaaactgggattgtatgaaaacatgaatgaacctgaaaattat
gctgatgtgaaaaaagcctatcatgcctttttagcaagaagcaatatgttagatttaata
gacatatatcagaagtgctctagtcttgggcttttagctgaagatgaaatcatatcccct
gttcaactgttggaatttatttccggtgtaatgaatgcacaagaaaataatggttctatt
ctttctactcctatacaaatcaacagacagggtcaggagcatatgaaggtgacaatcctg
gcaaagaagtttgtttgttcatatttaagccttttggtgaattctaaggatgatctggca
ttggctcatattctgaatgttcctgacagaggacttggtagagaagccttcactaacctg
aaacatgcctcccaagagagaaaaatgtccatttttctgatggcaacatcttttatccgg
accatagaacttggaggaagagactctgcatcttctatgtatgatcttttaagagcccat
gtaaaagggctttccaactttgttaattttattgacaagctgcaagaaattgttggtgaa
gtcttaaatacaagaatcgcaggggggcgaattctgtcaacagtgaagatgcatttgata
aaaggccggagcaatggggatcctttctgtgaggcagtggaggaagctgtacaagacttg
gatttgaagattaaaaatattattgattcacaacaggaaaccttgactgctagcactact
ggagtcagtccagcacggccaaaattgcattccataaatcatggcactgcatattgtggc
agagatactgtaaaggtcttgctagttcttctggatgaagaagctgtcagtcctcccacc
cagaacaaagcggatctgttgtgcgacagtgaaagcttaaatttgtgtggcatcacctct
gttttgacactcttcagatctccagcacgatccaatggctcttctccaaaacctcttggc
caacgtattctgaaatgtatggatgaaaaagtcattaagatgaagcaatcttcaattaaa
tcccaatttgcctgtacgtataaaaatgacttgagtgaaaagagtggtcagcattcccat
gcaattccaacctgcaaacatcctgtaccaaagcaacatttaaaagctggaaagtccaca
gggcttggaactatttctgaaagtgttcaccagactagaagttatacagaaatgggaaag
ctgagttgtcagccaaggaacaagaactctgagaatgaacagatggatttgaataatgac
aaaataatctgtgacaaggaaagtgaaccatctttgcaaaaaaatactaaaagacttaag
acttcaaacagctttaagaaggaattggacagcaaaattggtggaaaaagaaaacagacc
aaaactgcaagtaagaataagttgattgctggtcaggcaaaattaactcacttttttcaa
ctctaa
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