Vidua macroura (Pin-tailed whydah): 128807394
Help
Entry
128807394 CDS
T11570
Symbol
LAMB4
Name
(RefSeq) laminin subunit beta-4
KO
K06245
laminin, beta 4
Organism
vmc Vidua macroura (Pin-tailed whydah)
Pathway
vmc04510
Focal adhesion
vmc04512
ECM-receptor interaction
vmc04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128807394 (LAMB4)
04518 Integrin signaling
128807394 (LAMB4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128807394 (LAMB4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB4
LAMB1
Rod_CreS
DUF724
CEP135_TSGA10_CC
Motif
Other DBs
NCBI-GeneID:
128807394
NCBI-ProteinID:
XP_053833750
LinkDB
All DBs
Position
5:59302153..59342332
Genome browser
AA seq
1807 aa
AA seq
DB search
MRLGLAILLHLMLIRPQHTQHDCDAGSCHPALGDLLQGRSKQLTASSTCGMNSPQKYCII
GYLEAEEKCFLCDSRYPYNLYTQHNSHMIENVITTFEPKRKKKWWQSENGIDHVSIRLDL
ETLFQFSHLILTFKTFRPAAMLVERSTDFGQTWKVFRYFAHDCAASFPNISSGPAKSVGD
VVCDSRYSDIEPSTEGEVVLKALDPSFEIENPYVPYIQDLITLTNLRINFTKLHTLGDAL
LGRRHSDPLEKYYYAIYEMVVQGSCFCNGHASQCDSMQNLRGDVFHQSGMVHGRCVCHHN
TEGFSCERCKDFYNDAPWRPAEGTQDNACKRCNCNRHSSRCHFDMAVYQASGGISGGVCE
DCQDNTTGQHCDRCKPSFYQDPLKVISDPQPCLPCNCDPEGTLHEGVCESRTDPTLGTVA
GRCPCKENVEGARCDKCKANYYGLSSSDPLGCQPCNCDPLGSLPFSVCDPATGECLCQRF
TTGQRCEKCLAGYWGLGSSLYGCFPCDCDIGGSQNNLCSLKDGQCECLPNIVSRQCNEPA
PGYFFLPLDYYIYEAEHAKPLSGSAPLVQPSTLPRCDIYFQKKGYEFVIENGKIVLHRNK
KRTARKSGLEQGVMQFGQDSDLAVVFRQPRAGRAVTWTGHGFARVPSGAGLSFAISNVPF
AMDFDITVRYEPELLEDWLASVAIQPAGILSGQHCKNKVLSQEPHELPLPATKRIAILQT
PVCLEPGTEYFVDVYFSQLSASDKKAKSFILIDSLGLIPRIGSVENLCSEKDLDEYQKYH
CIEIASEVGPHVLPEACARLIVSLSARIHNGAVACKCNPQGSLNANCSKLGGQCQCKANV
VGRCCDTCSAGSYGFGFHGCYACECHPQGSLSTLCDQVTGQCSCRRDVGGQRCSRCLAGY
FGFPHCRPCLCNGHAELCDPLTGECLNCRGFTAGSRCERCMDGYYGNPLDGDPCHPCMCP
GAPTSNRYFARSCYKDSQFAQLVCNCLEGYSGNQCDKCPSGFYKNPSSPGLDCAPCPCNN
NIDLTDPESCNSVTGECTKCLHNTHGANCQFCKPGYFGSALNQSCQSCMCNMAGVHPALC
PGGDTACLCDPATGACPCLPNVLGATCDQCASGYWDLASGKGCQTCDCDPKNSQSNQCNQ
LTGQCPCKPGYSGRCCNECEENYFGNPQMHCVSCECNLEGTRQPTCDKATGACNCRVGVT
GRLCDQCSRGFEKDFPSCPRCHLCFDQWDTEIAALAQSVQGLMRFAAKLEDKGGRMPSCD
MRFKAFEDAISETERILRHPVLSLEALSGIRDFQGYLQQKVAQMDPLHSLPFEFPDLNKS
IEDIVEEANLVFELLQQKIHLHQSFQYFNFKEAISNIRKHSEVSLLAEQKTRGTIPIVRH
SEYTRNDTLAILDHQVLNSSSVLQQLRMIKSPGIQNLNEKICGVPGDQPCATAACGGALC
QDSHGLRKCGGPDCTGALPLSSEAFRKAEETAVLLNNLTTQLQEPGNQVKSIRKMAEDSK
LKGSQFNGQLETARNQIEVDGEIAKEFIQKAKDFLLDESAPPEDIEKVANYVLQINLPLT
PQELTGMLGKLQSIMNHCEKYKLNNKRNIKREDAQTLLVEAQEADKAAKALLPVGEINNK
LKNVVKSQGHSKSTIIKLNEEIRGIRTQISQAENQVNTTNDKLNDLSAKQTEMEDESATW
QAKMLMNNNQATKARAEAEAAHKQAQKIDNEFTDVKRKYTILQEKLKSQGPPKVTLEKVK
QLKEEAEKLAEETEKKIKRITDLEKKLQELNQTKQDKAEQLRQLEEQVIAIKDEIMEQES
KYATCKS
NT seq
5424 nt
NT seq
+upstream
nt +downstream
nt
atgaggctggggctggccatcctgttacacctcatgctgataagaccccagcatacacag
catgactgtgatgctgggtcctgccacccagcccttggggaccttctccagggccgcagc
aagcaactgacagcctcctcaacctgtgggatgaacagccctcagaagtactgcattata
ggctacctagaggctgaagagaagtgctttctctgtgattccagatacccatataatctc
tatacccagcacaacagtcacatgatcgaaaatgttatcacaacgtttgagcccaaaagg
aaaaagaagtggtggcagtcagaaaatggcattgaccatgtcagcattagattggaccta
gaaactttattccaattcagccatcttatcctgacctttaagacatttcggcctgcagca
atgctggttgagcgctctaccgattttggtcagacctggaaagtgtttagatattttgca
catgattgtgcagcttctttccccaacatctcttctggtccagcaaaaagtgttggagat
gttgtttgtgattcaagatattcagacatcgagccctccactgaaggcgaggttgtttta
aaagctttggatcccagctttgaaatagaaaatccatatgtgccatatatccaagatctc
attacattgacaaacctaagaatcaattttactaaactccacacccttggagacgctctg
cttgggaggaggcacagtgatccccttgagaagtactactatgccatctatgagatggtt
gtgcagggcagctgcttttgcaatggccatgccagccagtgtgattccatgcagaactta
cggggagatgttttccatcagtctgggatggtccatgggagatgtgtctgccaccataac
actgaaggtttctcttgtgaaagatgtaaagatttctacaatgatgctccctggaggcca
gctgaagggacacaagataatgcttgcaaacgttgtaactgcaacagacactccagcaga
tgccactttgacatggccgtgtaccaggccagcggtggcatcagcggtggcgtttgtgag
gactgtcaggacaacaccaccggccaacactgcgacaggtgcaaaccttccttttaccag
gatccactcaaagtcatctcagatcctcagccgtgcctcccatgcaactgtgaccccgag
ggtaccttgcacgagggcgtgtgcgagagccgcacggaccccacgctggggacggtcgcg
ggccggtgcccttgcaaggagaacgtggagggcgctcgctgcgacaagtgcaaggcaaac
tactacgggctgagcagcagcgaccccctgggctgccagccctgcaactgtgatcccttg
ggcagcttgcccttctctgtctgtgatcctgccacgggagagtgcctctgccagaggttc
accacaggacagcgctgtgaaaaatgccttgcaggatactggggtcttggcagcagcttg
tatggctgttttccatgtgactgtgatattggtggatcccagaataacttgtgctcgctg
aaggatggtcagtgcgagtgtctgcccaacatcgtgagccgccagtgcaacgagccagct
ccaggatacttctttctacccctggactattacatttatgaagctgagcatgcaaagccc
ctttctggctctgcacccttggttcagccaagcactcttccaagatgtgacatttacttc
cagaagaaaggctatgagttcgtgattgaaaatggaaagattgtgttacacaggaacaag
aaacgaactgcaagaaaatctggactggaacagggtgtgatgcagtttggacaggactcg
gatttggcggtggtattccggcagcccagagctggtcgggcggtcacgtggacaggacat
ggcttcgcccgcgtccccagcggagctgggctgagttttgccatcagcaatgttcccttt
gctatggactttgatatcacagttcgttatgagcctgagctcttggaagactggcttgca
agtgttgccatccagcctgctggtatcttgtcaggtcaacactgcaaaaacaaggtcctt
tcacaggagccacatgagttgcctctcccagctacaaagaggattgcaattctgcaaact
ccagtctgtctggagccgggaacagaatattttgtggatgtgtatttttctcagctctct
gcttctgacaaaaaggcaaaatcattcatcttgattgactcacttggacttattcccaga
atcggctctgtggagaacttatgcagtgaaaaggatttagatgagtaccagaagtaccac
tgtattgaaattgcatccgaagttgggcctcacgtcctgcccgaagcgtgcgcacggctc
atagtgagcttgtcagcccgaattcacaacggcgccgtcgcatgcaagtgcaatccccag
gggtcgctgaatgccaactgtagtaaactggggggccagtgtcagtgcaaagccaacgtc
gtgggacgctgctgtgacacctgctctgcaggcagctatggctttggcttccatggctgc
tacgcgtgtgagtgccacccgcaaggctcgctgagcacgctgtgtgaccaggtgacgggg
cagtgctcctgccgccgggacgtgggtggccagcgctgcagccgctgcctggctgggtac
tttgggtttccccactgccgtccctgcctttgtaatggccacgcggagctgtgcgaccct
ctgaccggagagtgcctcaactgccgcgggtttactgctgggagccgctgtgagaggtgc
atggatggttattatggaaaccctctggatggagatccctgccacccatgcatgtgccca
ggggcacctacaagcaataggtattttgcacgttcctgttacaaggactcccaatttgca
cagcttgtctgtaattgtctcgagggatattcaggcaatcagtgtgacaagtgtcctagt
gggttctacaaaaaccccagcagtcctgggcttgactgtgcaccatgtccctgcaataac
aacattgatttgacagacccagagtcctgtaacagtgtcactggggaatgcaccaagtgt
ttacacaacacccatggagcaaactgccagttctgcaaaccaggttattttggctcagcc
ctcaatcaaagctgtcaaagctgcatgtgcaatatggcaggtgttcaccctgccctgtgc
ccggggggggacacagcctgcctgtgtgacccagccacaggagcttgtccttgcctgccc
aatgtgctgggtgccacgtgtgaccagtgtgcctctggctactgggacctggctagtgga
aaaggatgtcagacctgtgactgtgatccaaaaaactcccaaagcaaccagtgcaaccag
cttacaggccagtgtccatgtaagccaggttacagtggaagatgctgtaatgaatgtgag
gaaaactactttggcaatccccagatgcattgcgtttcatgtgagtgtaacctggagggg
acccgccagcccacgtgtgacaaagccaccggcgcgtgtaactgccgtgttggtgtcacc
ggccggctctgcgaccagtgcagccgcggctttgagaaggactttccctcctgccctcgg
tgtcatctttgttttgatcagtgggacactgaaattgctgctcttgctcagagtgtgcag
gggttaatgaggtttgcagcaaagctggaagataaaggaggacgaatgcccagctgtgac
atgcgcttcaaagcctttgaagatgccatttctgaaacggaacgcattttgagacatcct
gtcctttcactggaggccctttcaggcatcagggattttcagggctaccttcaacaaaaa
gttgcacagatggatccccttcacagtttgccctttgagtttcctgaccttaacaagagc
atagaagatattgtagaagaagccaacctagtgtttgaacttctacaacaaaaaatacat
ctgcatcaaagttttcagtacttcaacttcaaagaggccatcagcaacattaggaaacac
tctgaagtatcattgctggcagaacagaagaccagggggacaatccctattgtaagacac
tcagagtacaccaggaatgacacactcgccatattggaccatcaggtcttaaactcaagc
agtgtgctacaacagctcagaatgatcaaaagccctggcatccaaaacttaaatgaaaag
atctgtggtgttccaggagaccagccatgtgccacagcagcctgtgggggagctttgtgc
caggacagtcacggactaaggaaatgtggtggcccagactgcactggagctcttcctctc
tcctctgaggcctttaggaaagctgaggagactgctgtgttgctaaataacttgactact
cagctacaggaacctgggaatcaggttaaaagcattaggaaaatggcagaagacagcaaa
ctgaaaggctcacaatttaatgggcaactggagacggctaggaatcaaattgaagttgat
ggagagatcgctaaggagttcatccaaaaagcgaaagacttcttgttagatgagagtgca
cctccagaagacattgagaaggtggcaaattacgttctgcaaataaaccttcccctgact
ccacaagagctcacaggcatgcttggcaaactccaaagcattatgaaccactgtgagaag
tacaaactgaataataagagaaacataaaaagggaggatgctcagacactgctggtggag
gcacaagaagctgacaaagcagctaaagctcttctgccagtgggtgaaattaataataaa
ctaaaaaatgttgtgaagtcccaagggcactccaaaagcaccatcataaagttaaatgaa
gagatacgaggcatcagaacacaaatctctcaggctgagaaccaagtgaacacgacaaat
gataaactaaatgacttgtcagccaaacagactgagatggaagatgaaagtgccacatgg
caggcaaaaatgctgatgaacaacaatcaagctacaaaggcaagagcagaggcagaagca
gcccacaagcaagcccagaaaattgataatgaatttactgacgttaaaagaaagtatacc
attcttcaagaaaagctaaaaagccaaggacctccaaaagtaacactagaaaaagtgaag
cagttgaaagaagaagcagaaaagctggctgaagagactgaaaagaagataaaaagaata
acagatttggagaagaagcttcaggaactgaatcaaaccaaacaagataaggcagagcaa
ctgagacaactagaggaacaagtgatagccattaaagatgaaattatggagcaggaaagc
aagtatgcaacatgcaagagttag
DBGET
integrated database retrieval system