Vidua macroura (Pin-tailed whydah): 128807401
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Entry
128807401 CDS
T11570
Symbol
NUP50
Name
(RefSeq) nuclear pore complex protein Nup50
KO
K14295
nuclear pore complex protein Nup50
Organism
vmc Vidua macroura (Pin-tailed whydah)
Pathway
vmc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128807401 (NUP50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vmc03019
]
128807401 (NUP50)
Messenger RNA biogenesis [BR:
vmc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128807401 (NUP50)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP50
Ran_BP1
EVH1_PP4R3
Motif
Other DBs
NCBI-GeneID:
128807401
NCBI-ProteinID:
XP_053833766
LinkDB
All DBs
Position
5:8138187..8154079
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AA seq
469 aa
AA seq
DB search
MAKRIAEKELTDRNWDQEDEAEEVGTFSVASEEVLKNRAIKKAKRRNVGSESESGGAFKG
FKGFVLPSGKGGGGFSGFGNGAGIKPLEGLSNGSSSVSSTPPFSSLKSTSETQSAFGSPV
SNGPSAAVFAEKKAVSPTANGGSQPCSSGGALSAAHGSGAYHKQLAALNCSVRDWIVKHV
NTNPLCDLTPIFRDYERYLASIEQQHGGSSDSSSENESSKTPGPQAVPVFGSSKLQQGST
FLFNNKTEDTSDKKPEASSEKRDPLLGATSTVSFNFGKSVDSSVLCSLGSGTSSSFSFSP
GNSGLFGKDANQAKSVTAPSTSLLEAQTDSGNSDDKGGEEEEEEPPKVIVNEIKEDDAFY
SKKCKLFYKKDNEFKEKGVGTLHLKPAGNEKTQLLVRADTNLGNILLNVLIPPKMPCTRT
GKNNVLIVCVPNPPIDEKNPAVPVTMLIRVKTSEDADELHKILLEKKEA
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagagaattgcagaaaaggaactgactgaccgaaactgggaccaggaggatgaa
gctgaagaggtgggaacattctctgtggcaagtgaagaggtcctgaaaaacagagctatt
aaaaaagcaaagcgccgaaatgttgggtcagagtctgaaagtggaggagcttttaaaggg
tttaaaggctttgtattgccttctgggaaaggaggaggtggcttcagtggattcgggaat
ggtgcaggaataaagcctttggaagggctgtctaatggaagcagtagtgtctctagtact
cctcctttcagcagtttgaagagcacctctgaaacacaatcagcatttggatccccagtg
tcaaatggtcccagtgctgccgtgtttgctgagaagaaggctgtcagcccgacagccaac
ggcggcagccagccctgctcgtctggcggcgccttgagcgcggcgcacggctctggtgcc
taccacaaacagctggctgctctcaactgctccgtgcgtgactggatagtgaagcacgtt
aacaccaaccccctgtgcgacctgacccccatcttcagggactatgagcgctacttggcc
agcattgagcagcagcatggaggcagcagtgacagcagctccgagaacgaaagcagcaag
acccctggcccgcaggctgttcctgtgtttgggagttcaaagctccagcaaggctccaca
tttttgtttaacaacaaaactgaggatacctcagacaaaaagcctgaagcttcatcagaa
aaaagagacccgttgttaggagctacatcaactgtctcatttaattttggcaagagtgtt
gacagttctgttttgtgttcccttggttcaggaacatctagtagtttctcattttctcct
gggaattcaggtttgtttggaaaagatgcaaaccaggccaagtctgtcactgcaccatcc
accagtttattggaagctcagacagacagtggcaatagtgatgacaaaggaggggaagag
gaggaagaagagccaccaaaagtcattgttaatgaaataaaagaagatgatgctttctac
tcaaagaagtgcaaactgttctacaaaaaagataatgaatttaaagaaaaaggtgtagga
acattacatttaaaaccagcaggaaatgaaaaaactcaactcttagtacgagcagatacc
aatttaggaaatatactgttgaatgttctaattccacctaagatgccatgtacaagaacc
ggaaaaaacaatgttcttatagtttgtgttcctaatccaccgatcgatgagaagaatcca
gctgttcccgtcactatgctaataagagtgaaaacaagtgaggatgcagatgagttgcac
aaaatcttactggagaaaaaggaggcttaa
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