Vidua macroura (Pin-tailed whydah): 128807554
Help
Entry
128807554 CDS
T11570
Symbol
CNTN1
Name
(RefSeq) contactin-1
KO
K06759
contactin 1
Organism
vmc Vidua macroura (Pin-tailed whydah)
Pathway
vmc04514
Cell adhesion molecule (CAM) interaction
vmc04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
128807554 (CNTN1)
04517 IgSF CAM signaling
128807554 (CNTN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
vmc04515
]
128807554 (CNTN1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
vmc00537
]
128807554 (CNTN1)
Cell adhesion molecules [BR:
vmc04515
]
Immunoglobulin superfamily
Contactins
128807554 (CNTN1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
vmc00537
]
Others
128807554 (CNTN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
fn3
Ig_2
V-set
FN3_DSCAM-DSCAML_C
Ig_VEGFR-1-like_5th
F22D3_4_N
VEGFR1-3_N_Ig-like
Pur_ac_phosph_N
Fn3_VIN3
Fn3_ROS1
Interfer-bind
Tissue_fac
Ig_ANOS1
DUF4998
Big_3_4
NDNF
Fn3-I_PB4
Motif
Other DBs
NCBI-GeneID:
128807554
NCBI-ProteinID:
XP_053834001
LinkDB
All DBs
Position
5:complement(45535396..45750093)
Genome browser
AA seq
1024 aa
AA seq
DB search
MMVLQCTIPFEIMAEQKITIWFFICHLITPCFVYSLAAEEGNKGYGPVFEEQPIDTIYPE
ESSDGQVSMNCRARAVPFPTYRWKLNNWDIDLTKERYSMVGGRLVINNPEKSRDAGKYVC
VVSNVFGTVRSSEATLSFGYLDPFPPEERYEVKVREGVGAVLLCEPPYHYPDDLSYRWLL
NEFPVFIALDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPQSD
RAKVYPADIKVKFKDTYALLGQNVTLECFALGNPVPELRWSKYLEPLPASAEISMSGAVL
KIFNIQYEDEGLYECEAENYKGKDKHQARVYVQAAPEWVEHINDTERDIGSDLYWPCIAT
GKPIPTIRWLKNGASFRKGELRMQSLTFDDAGMYQCIAENMHGIIYANAELKIVASPPTF
ELNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTELLANGSRIRIWDDGSLEIINVT
KLDEGRYTCFAENNRGKANSTGVLEMTEATRITLAPLNVDVTVGENATMQCIASHDPTLD
LTFIWSLNGFVIDFEKEHEHYERNVMIKSNGELLIKNVQLRHAGRYMCTAQTIVDNSSAS
ADLVVRGPPGPPGGIRVEEIRDTAVALTWSRGTDNHSPISKYTIQSKTFLSEEWKDAKTD
PSDIEGNMESATVIDLIPWMEYEFRIIATNTLGTGEPSMPSPRIRTEGAPPNVAPSDVGG
GGGSNRELTITWMPLSREYHYGNNFGYIVAFKPFGEKEWRRVTVTNPEIGRYVHKDESMP
PSTQYQVKVKAFNNKGDGPFSLTAVIYSAQDAPTEIPTDVSVKVLSSSEMSVSWHHVSDK
SVEGYQIRYWAAHDKEAAAQRVQVSNQEYSTKLENLKPNTRYHVDVSAFNSAGYGPPSST
IDVVTRKAPPSQRPRIISSVRSGSRYIITWDHVKAMSNESAVEGYKVLYRPDGQHEGKLF
STGKHTIEVPVPSDGEYVVEVRAHSEGGDGEVAQIKISGAAVGVPTLLLVLVVPALGVLA
CSGF
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgatggtattgcagtgcacaattccttttgagataatggctgaacagaagataaccatt
tggtttttcatctgtcatcttattacaccctgttttgtctactccctggcagcagaggaa
ggaaacaaaggttatggacccgtttttgaggagcaacctattgatactatctatccagaa
gaatcttcagatggacaagtttcaatgaactgcagagctcgagcagttccttttccaact
tacagatggaaactcaacaactgggatattgatttaacaaaggagcgctacagtatggtg
ggaggcagacttgttatcaacaatccagagaaatcaagggatgctggaaaatatgtctgt
gtagtgtcgaatgtatttggaactgtcagaagcagtgaagccactctgagttttggatat
ctggatccctttccacctgaggaacgttatgaggttaaagtgcgggaaggtgttggagca
gtgcttctttgtgagcccccttaccactacccagatgacctcagttatcgctggcttcta
aatgagttcccagtgttcattgctttggacaaacgacgatttgtgtcacagacaaatggc
aatctctacattgcaaatgtggaagcatcagataagggcaattattcatgttttgtgtcc
agcccttcgataacaaagagtgtattcagtaaatttattccacttattccgcaatctgat
cgagcaaaagtgtatcctgctgatatcaaggtgaagttcaaggacacgtatgctctcctg
ggacaaaacgtgacactggagtgttttgctcttggaaatccggttcctgaactcagatgg
agtaaataccttgaacccttgccagcctctgctgagataagcatgtctggtgcagttctt
aagatcttcaatattcagtatgaagatgaaggactttatgagtgcgaagctgaaaactat
aaaggaaaagataaacaccaagcaagagtttatgtacaagctgctcctgagtgggtagaa
catatcaatgacacagaaagggatataggcagtgacctgtactggccttgtatagctacg
ggcaagcctattccaacaattaggtggctgaagaatggtgcctcgttccggaaaggtgaa
ctaagaatgcaaagtctgacctttgacgatgccggcatgtaccagtgtatagcagaaaac
atgcatggaattatttatgcaaatgctgaactgaagattgtggcttcacctcctactttt
gaactgaaccctatgaagaagaaaatcttagcagctaaaggagggcgtgtaatcattgaa
tgcaagcctaaagctgctcctaagccaaaattctcctggagcaaaggaacagaattgctt
gcaaatgggagccgcatacgtatctgggatgatggaagcctggaaattatcaatgtcaca
aagctggatgaaggtcgctatacctgttttgcagaaaataaccgaggaaaagccaatagc
actggtgttctagaaatgacagaagctacaaggattactttagctccgttgaatgttgat
gtcaccgttggagagaatgctaccatgcaatgcattgcatcccatgatcccacattagac
ctgacatttatttggtctttaaatggctttgtcatagattttgagaaagaacacgaacat
tatgaacggaatgttatgattaaatccaatggtgagctgctgattaaaaatgttcagcta
cggcatgcagggaggtacatgtgcactgctcagacaattgtggacaactcctcagcttca
gctgaccttgtggtaagaggtcctccaggcccccctggaggtataagagtagaagaaatt
agagacactgctgtagcacttacctggagtcgtggaacagacaatcatagtcctatttct
aaatacactatccagtcaaaaacctttctatccgaagagtggaaagatgccaaaacagac
ccatcagatattgaaggaaatatggaatctgctacagtgatcgatttaattccatggatg
gaatatgaattccggataatagcaacaaacactctggggacaggagaacccagtatgcca
tcaccgaggattagaactgaaggcgctcctcctaatgtggctccttctgatgttggtgga
gggggtggaagcaatcgagagctgacaataacatggatgcctttgtcaagagaataccac
tatggcaataactttggttatatagtggccttcaagccatttggtgagaaagagtggaga
agagttacagttactaatcctgaaattggccgatatgtccacaaggatgaatcaatgcca
ccttcaactcagtatcaagtaaaagtgaaagcttttaacaacaaaggggatgggccattc
agtctcactgctgtcatttattcagcacaagatgcaccaactgaaatacctacagatgtg
agtgtaaaggttttgtcatcttctgaaatgtctgtttcttggcaccatgtttctgataaa
tctgtggagggatatcagattcgttactgggctgctcatgataaagaagcagctgcacag
cgggtacaggtgagcaatcaagagtattcaaccaaactggaaaacctgaagcctaacact
cgctaccatgtggatgtgtctgccttcaatagtgcaggctatggacctcccagcagcacc
attgatgttgttacaaggaaagcacctccaagccaacgcccaagaattatcagttctgta
agatctggttcaaggtacatcatcacctgggatcacgtgaaggctatgtcaaacgagtct
gccgtcgaaggatacaaagtactttataggccagatggacagcatgaaggcaagttgttt
tccactggaaagcacacgatagaggtcccagtccccagtgatggtgaatatgttgttgag
gtgcgagcacacagtgaaggaggagatggagaagtagcccaaataaaaatttcaggtgcc
gctgttggagtaccaactctgctcctggtcctagtggtgcctgccctgggtgtccttgcc
tgctcgggattctga
DBGET
integrated database retrieval system
