Vidua macroura (Pin-tailed whydah): 128808237
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Entry
128808237 CDS
T11570
Symbol
SOX10
Name
(RefSeq) transcription factor SOX-10 isoform X1
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
vmc Vidua macroura (Pin-tailed whydah)
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vmc03000
]
128808237 (SOX10)
Transcription factors [BR:
vmc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
128808237 (SOX10)
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Motif
Pfam:
Sox_N
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
128808237
NCBI-ProteinID:
XP_053835089
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All DBs
Position
5:20320070..20330615
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AA seq
564 aa
AA seq
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MIAEIGSNIPINQGPRPIPTPTDHGFCGVHSNCVACALIEQPLSLGQFFRDLGVPFRFGR
CFSFSLFSSFFPFFPLFLSSSLPSPVRRRTARRKREGLRATMADDQDLSEVEMSPVGSED
HHCLSPGPSMASDNSPHLTGSGNGEMGKVKKEQQDSEADDDKFPVCIREAVSQVLSGYDW
TLVPMPVRVNGSNKSKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLL
NESDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGKATQGEGEGQVEGEAGGAAAIQAH
YKNAHLDHRHPGEGSPMSDGHPEHSSGQSHGPPTPPTTPKTEMQAGKADSKREGRSLGEG
GKPHIDFGNVDIGEISHEVMSNMETFDVNEFDQYLPPNGHAGHPGHVGGYAAAAAAGYGL
GSALAAASGHSAWISKQHGVSLSTATSSVVDSKAQVKTEGSTPGGHYTDQPSTSQIAYTS
LSLPHYGSAFPSISRPQFDYPDHQPSGPYYSHSTQASGLYSAFSYMGPSQRPLYTAISDP
APSVPQSHSPTHWEQPVYTTLSRP
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgattgcagagatagggagcaatatcccaattaatcaggggccccgacccatccccacc
cccactgatcacgggttctgcggtgtgcacagcaattgcgttgcttgcgctttaattgag
cagcccctgtctcttggtcagttcttcagagaccttggagtccctttcagatttggtcgt
tgcttctcattttctctcttttcctccttttttcctttctttcctttgtttttgtcttcc
tcccttccctccccagtgagaagaaggacagcaagaaggaagagggaaggcttgagagca
acgatggctgacgaccaagacctttcggaggtggagatgagcccagtgggctctgaagac
caccactgcctctccccaggaccctccatggcatcagacaactccccacacctcactggc
tctgggaatggggagatggggaaggtgaagaaggaacagcaagactcagaggcggatgat
gacaagttcccggtgtgcatccgcgaggcagtcagccaggtgctgagcggctatgactgg
accctggttcccatgcccgtccgggtcaatggaagtaacaagagcaaaccccatgtcaag
cggcccatgaatgccttcatggtctgggcacaggctgcccgaaggaaattggctgaccag
tacccgcacctgcacaatgccgagctcagtaagaccttggggaagctctggaggttattg
aacgaaagcgacaagcggcccttcattgaagaggcggagcggctgaggatgcagcacaag
aaggaccatcctgattacaagtaccagccccgccggcggaaaaatggcaaggccacacag
ggcgagggtgaaggccaggtagaaggggaggctggtggggctgctgccatccaggcccac
tacaagaatgcccacctggatcacaggcatcccggtgaagggtcgcccatgtctgacggt
catccagaacactcctcaggtcagagccatgggccccccacacctcctaccacccctaag
accgagatgcaggcaggcaaagccgattccaaacgagaagggcgttccctgggggaaggg
ggaaagccacacattgactttggaaatgtggacattggggagatcagccatgaggtgatg
tccaacatggagacctttgatgtcaatgaatttgatcaatacctgccgcccaacggacac
gctggccacccaggccatgtcgggggctatgcggcagcggctgctgctggctacggcctc
gggagcgccctggctgcggccagcggacactctgcctggatctccaagcagcatggagtc
tccttgtccactgccacctcatcggtggtggactcaaaggcccaggtgaaaacggagggg
tccacccctggaggccattacactgaccagccctccacttcccagattgcttacacatcc
ctgagtctgccccactacggctcggccttcccctccatctccaggccacagtttgactac
ccggaccaccagccctcgggaccctactacagccattccacccaagcctctggcctctac
tctgccttctcctatatgggaccttcccaacgtcccctttacactgccatctctgaccct
gcaccctccgtgccacagtcccatagccccacacattgggaacagcccgtgtacacaact
ctctccagaccatag
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