Vidua macroura (Pin-tailed whydah): 128808428
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Entry
128808428 CDS
T11570
Symbol
BMAL1
Name
(RefSeq) basic helix-loop-helix ARNT-like protein 1 isoform X1
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
vmc Vidua macroura (Pin-tailed whydah)
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vmc03000
]
128808428 (BMAL1)
Transcription factors [BR:
vmc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
128808428 (BMAL1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
PAS_4
bHLH_IRO3
PAS_2
bHLH_INO2
bHLH_NCOA
bHLH_NPAS4
PAS_8
Motif
Other DBs
NCBI-GeneID:
128808428
NCBI-ProteinID:
XP_053835494
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All DBs
Position
6:59706359..59761845
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AA seq
633 aa
AA seq
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MADQRMDISSTISDFMSPDPADLISSSLSTSGMDCNRKRKGSSTDYQLDGFPFEEGMDTD
KDDQHGRLEYADQQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLT
VLRMAVQHMKTLRGATNPYTEANYKPAFLSDDELKHLILRAADGFLFVVGCDRGKILFVS
ESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDIA
PGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPP
TKMGLDEDNEPDNEGCNLSCLVAIGRLHPHVVPQPANGEIRVKPTEYVSRHAIDGKFVFV
DQRATAILAYLPQELLGTSCYEYFHQDDIAHLAECHRQVLQTREKITTNCYKFKIKDGSF
ITLRSRWFSFMNPWTKEVEYIVSTNTVVSTTVLDSGDAAFPQLAASPHSMDSVLQAGEGG
PKRTHPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDTS
SPGGKKILNGGTPDISSAGLLSGQIQDNSGYPYSDNSSILGENSHMGMDMIDTEQGSSSP
SNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccaaaggatggacatatcttctacaattagtgactttatgtcaccagaccct
gctgacttgatctccagttcccttagcacttcaggaatggactgtaataggaaaagaaag
ggaagctcaactgattatcaactcgatggctttccttttgaggaaggtatggatacagat
aaagatgaccagcatggaagattggagtatgcagaccaacaaggcaggataaaaaatgca
agggaggctcacagtcagatcgagaagaggcgcagggataagatgaacagcttcatagac
gagctggcctcgctggtgcccacgtgcaacgccatgtcccgcaagctggacaagctcacc
gtgctcaggatggctgtccagcacatgaaaacacttcgtggtgctacaaatccatataca
gaagcaaactacaagcctgcttttctatcagatgatgaattaaaacatcttattctcagg
gcagcagatggattcctttttgttgtgggctgtgacagaggaaagatactgtttgtttca
gaatctgtcttcaagatcctcaactacagtcagaatgatttgattggtcaaagtttattt
gattatctccatcctaaagacattgccaaagtgaaggagcagctctcttcttctgacacc
gcgccacgagaaagacttatagatgcaaaaaccggactcccggtcaagacggacatcgcg
cccgggccctcgcggctctgctccggagcacggcgctccttcttctgcaggatgaagtgc
aacaggccctccgtcaaggtagaagacaaggatttcccttcaacctgctccaagaagaaa
gcagaccgcaaaagcttttgcactattcatagcacaggctacttaaaaagctggcctcca
acaaagatgggcctggatgaagataacgagccagataacgagggctgtaatttgagttgc
ctcgttgccatcggcaggctccatccccacgtggtcccgcagccggcgaacggcgagatc
cgggtgaagcccacggaatacgtgtcccggcacgccatcgacggcaagttcgtctttgta
gatcagagggcaacagctatcctggcatacttaccccaggaacttctaggtacttcgtgt
tatgaatattttcatcaagatgatatagcacatcttgcagaatgtcacagacaagttttg
cagacaagagaaaaaattacaactaattgctacaagtttaaaataaaagatggctctttt
attacgttgcggagtcgctggttcagtttcatgaacccttggaccaaagaagtagaatac
attgtctccacaaacacagtcgtttccaccacggtcctggacagcggggacgcggccttt
ccccagctggcagcgtccccgcacagcatggacagcgtgctccaggctggagaaggtggc
cccaaaaggactcatcccactgtgcctggaattccaggtggaacaagagctggggcaggt
aaaatagggaggatgattgctgaagaaatcatggagattcacaggataagaggatcatca
ccttccagctgtggctcaagtcccctgaacatcaccagcacccccccacccgacacatcc
tcgccaggagggaagaagatcttgaatggtggcactccagacatttcttcagctgggctg
ctgtctgggcaaatccaggataattctgggtacccgtattccgacaactcctctatcctg
ggggagaactcccacatgggcatggacatgatcgacacggagcagggctccagcagcccc
agcaacgacgaggcagccatggcggtcatcatgagcctgctggaggccgacgcggggctc
ggcggccccgtggacttcagcgacctgccctggcccctgtga
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