Vidua macroura (Pin-tailed whydah): 128808833
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Entry
128808833 CDS
T11570
Symbol
RAG1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
vmc Vidua macroura (Pin-tailed whydah)
Pathway
vmc04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
128808833 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vmc04121
]
128808833 (RAG1)
Enzymes [BR:
vmc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128808833 (RAG1)
Ubiquitin system [BR:
vmc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128808833 (RAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAG1_imp_bd
RAG1_ZnH2
RAG1_RNase_H
RAG1_C
RAG1_pre-RNase_H
RAG1_ZnC2
RAG1
RAG1_DNA-bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
128808833
NCBI-ProteinID:
XP_053836396
LinkDB
All DBs
Position
6:complement(43414247..43417369)
Genome browser
AA seq
1040 aa
AA seq
DB search
MSGASQMDLPEELQHTYTKFSEWKFKLFKLRSFEKTPSDGSQHIHKDQAEEPVSSNKEII
LNKDEAVPRGEKMELTSNRQGLEEDAHDMKTQDNRAHQNNLKQLCRICGISFKTDCSKRT
YPVHGPVDDETLCVLRKKEKTATSWPDLIAKVFKIDVRGDVDTIHPTQFCHNCWNIIHRK
FSNTLCEVYFPRNSTMEWQPHSPNCDVCHTTRRGVKRKSQLPSVQRGKRVKITGERSQLN
RGVKNQQLKQAQINNKNLMKEIVNCKDIHLSTKLLAVDYPVDFIKSISCQICDHILADPV
ETTCRHLFCRTCILKCIRVMGSYCPSCWYPCFPTDLVTPVKSFLNILDNLSIRCPVKECD
EEISHGKYGQHLSGHKEMKEGELYSYINKGGRPRQHLLSLTRRAQKHRLRELKRQVKAFA
EKEEGGDIKAVCMTLFLLALRAKNEHKQADELEAIMQGRGSGLHPAVCLAIRINTFLSCS
QYHKMYRTVKAVTGRQIFQPLHALRTAEKALLPGYHPFEWKPPLKNVSTNTEVGIIDGLS
GLPLSIDDYPVDTIAKRFRYDAALVCALKDMEEEILEGMKAKNLDDYLNGPFTVVVKESC
DGMGDVSEKHGSGPAVPEKAVRFSFTVMNISLAHGNESKRIFEEVKPNSELCCKPLCLML
ADESDHETLTAILSPLIAEREAMKNSELLLDMGGILRTFRFVFRGTGYDEKLLREVEGLE
ASGSTYICTLCDATRLEASQNLVFHTITRSHAENLERYEIWRSNPYHESVDELRDRVKGV
SAKPFIETVPSIDALHCDIGNATEFYRIFQMEIGELYKNPDVSKEERKRWQLTLDKHLRK
KMNLKPMLKMSGNFARKLMSKETVEAVCELIKCEERHEALKELMDLYLKMKPVWRSSCPA
KECPELLCQYSYNSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAWASE
GNESGNKLFRRFRKMNARQSKVYEMEDVLKHHWLYTSKYLQKFMNAHKTLKSQSFTIDSG
GSLGDSLPLEVLENRDSAEL
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggagcatcacaaatggacctacctgaagaacttcagcatacatatacaaaattt
tctgaatggaaattcaagctctttaaattgcgatcatttgaaaaaacaccctctgatggc
agccagcacatacacaaagatcaagcagaagagcctgtttcttcaaacaaagaaataatc
ctaaataaagatgaagcagtgccaagaggagagaagatggagttaaccagcaataggcag
ggacttgaggaagatgcccatgacatgaaaacacaagacaatagagctcatcagaacaat
ctgaagcaactctgtcgcatctgtgggatttcatttaaaactgattgttccaagagaact
tacccagtgcatgggccagtggatgatgaaactctgtgtgttctgagaaagaaagaaaaa
acagcaacctcttggccagatcttattgctaaggttttcaagattgatgtgcgaggggat
gttgacaccatccatcccactcaattttgtcacaactgttggaatattatacatagaaaa
ttcagtaatactctatgtgaagtgtattttcctaggaacagcacaatggagtggcaaccc
cattccccaaactgtgatgtctgccatactaccagacgaggagtcaagagaaaaagccag
ctcccaagtgtgcaacgtggcaaacgtgtcaaaatcactggggagcgttctcagctaaac
agaggtgtaaagaaccaacaactcaaacaagcacagataaataacaaaaatttaatgaaa
gagattgtaaattgtaaggatatacatctcagcaccaagctgcttgcagttgattaccca
gtagatttcattaaatctatttcttgccagatttgtgatcatattttggcagatccagtg
gaaacaacatgcagacacttgttttgcagaacttgcatccttaaatgtatcagggttatg
ggcagctattgcccctcctgctggtatccttgctttcctactgatctggtaaccccagtg
aaatccttcctgaacatccttgataatctgagtataagatgccctgtaaaggaatgtgat
gaagagatctcacatggaaaatatggtcaacacctctctggccacaaggagatgaaagaa
ggagagctgtatagctacatcaataaaggtggccgaccgaggcagcacctcctgtctttg
acgaggagagctcagaaacatcgtctgagggaactgaaacgtcaagtcaaggcttttgct
gagaaagaagagggtggtgacataaaggctgtatgcatgactttgttcctgctagctttg
agagcaaaaaatgaacacaaacaagcagatgaactggaggctataatgcaagggagagga
tctggacttcatcctgctgtctgtctggccatccgaattaacacgtttctcagctgtagt
cagtatcataaaatgtatagaacagtaaaagctgtcactgggaggcagatcttccagcct
ttgcatgctcttcgcactgctgagaaagccctcctgccaggttatcacccatttgagtgg
aaacctcccctgaaaaatgtatccactaacacagaagtgggaattatagatggactatca
ggactgccactctcaattgatgattacccagtagacacgattgcaaagagattccgatac
gatgcagccttagtttgtgccttaaaggacatggaggaggagatcttggaaggcatgaaa
gcaaaaaatctggacgactatttgaatggccccttcactgtggtggtaaaagagtcctgt
gatggaatgggagatgtcagtgagaagcatggaagtgggcctgctgtcccagagaaggct
gttcgcttttctttcacagtcatgaacatttctctagcacatgggaatgaaagcaagaga
atctttgaggaagtaaagcccaattcagagttgtgctgtaagcccttgtgccttatgctg
gctgatgaatcagatcatgaaactctgacagcaatcctgagccccctcatagcagaaaga
gaggctatgaaaaacagcgaactgctgcttgatatgggaggcatcctaagaacatttaga
tttgtctttagaggtacgggatatgatgagaaactcttgcgggaagtggaagggctggag
gcctcaggttccacttatatttgtaccctgtgtgatgcaacccgcttggaggcatcccag
aatctggtcttccacaccataaccagaagtcatgctgaaaatctggagcgatatgaaata
tggaggtccaacccatatcacgagtctgttgatgagctccgtgacagagtgaagggtgtt
tcagccaaaccttttattgagactgttccctccatagatgcattgcactgcgacattggc
aatgcaacagaattctacaggattttccagatggagattggtgaactttacaagaatcct
gatgtttctaaagaggagaggaagagatggcagttgactcttgacaaacatctcaggaag
aagatgaacttgaagcctatgctgaagatgagtgggaattttgctagaaagctcatgtcc
aaagagactgtagaggcagtatgtgaattaattaagtgtgaggaaaggcatgaagctcta
aaagaactaatggacctttatctgaagatgaaaccagtgtggcgatcctcgtgccctgcc
aaggagtgtccagaactgctgtgccagtatagctacaattcacagcgttttgcagagctc
ttatctacaaagttcaagtacagatatgagggcaagattacaaattatttccacaaaaca
cttgctcatgttcctgaaatcattgaaagagatgggtccattggggcctgggcaagtgaa
ggaaatgagtctggaaacaaattgtttaggagattccgaaaaatgaatgccaggcagtct
aaggtctatgagatggaggatgtcttgaagcaccactggctgtatacctccaagtacctc
cagaagttcatgaatgctcataaaacattaaaaagccagagcttcaccattgattcaggg
ggtagtttaggtgactccttgccactggaggtcttggaaaaccgtgattcagcagaactc
taa
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