Vidua macroura (Pin-tailed whydah): 128808972
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Entry
128808972 CDS
T11570
Symbol
NUP160
Name
(RefSeq) nuclear pore complex protein Nup160
KO
K14303
nuclear pore complex protein Nup160
Organism
vmc Vidua macroura (Pin-tailed whydah)
Pathway
vmc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128808972 (NUP160)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vmc03019
]
128808972 (NUP160)
03036 Chromosome and associated proteins [BR:
vmc03036
]
128808972 (NUP160)
Messenger RNA biogenesis [BR:
vmc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128808972 (NUP160)
Chromosome and associated proteins [BR:
vmc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
128808972 (NUP160)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_NUP160_120_M
Beta-prop_Nup120_160
TPR_Nup160_C
NUP160_helical
HEAT_Nup120
Motif
Other DBs
NCBI-GeneID:
128808972
NCBI-ProteinID:
XP_053836634
LinkDB
All DBs
Position
6:57374076..57398340
Genome browser
AA seq
1394 aa
AA seq
DB search
MAAALAARSCLELSAAGRAPPRPPQELLFEPPGIAPLPAGRYGDSAGGFCYQESAQLGAA
TRNRWVRWSTSGDTVELVEESLDVNLLNNAVRLRIQGCPFLPGGIHLCEVQSHLVVLLLT
AQTVHRLLLPHPARLYRSELITESQVQSVFTDISKIHIRDPSNYYVIPSVPGLAPNSVAS
AAWLSSEGEALFALPSASGGIFVLKLPPPDAPGSVSVVELKQSSVVQRFLTGWMPTAIRG
DGGPSDVPVSLSVHCLDHDAFLFALCQDHKLRMWSYKDQMCLMVADLLEFMPVSRDLRLA
AGTGHRLRLAFSQSLGLYLGVYMHAPKRGQFCVFQLVSTESNRYSLDHISSLFSSQETLV
DFALTSAEIWALWHNEENQTVVKYINFEQNVAGQWNQVFVQPLPEEEVTVRQDQDPREIY
LEYLFMPGRFTNAAIHKALQIFSQGTERHMDLTWDELRKEVTLAVENEFQASVTEYECSP
EEFWQLQVEFWSKFYACCLQYQEALSRPLALHLNPYTSMVCLLKKGSMSFLVPCSLVDHL
YLLSNEHLLTEDDAAIFEDLEMSRDVVCLVQCLRLIGESISMEMAFIMEMACSRLQPPEK
AAEQILEDLIANDTENVMEDIHSKLQEIRNPIHAIGLLIREMDYETDADMERAPHLALRM
SLSQLFGSSTAAHVVCGGVAKICTVRFLLCRDLLILQQLLLRLGDPMVLGGGQLFQSQQD
LLHRTSPLLLSYFLIRWASQCLTSDVPVDTLESNLQHLSVLELADTTALTPHKLVSSPQT
IVELFFQEVARKHIISRLFLQPNTSLAETSLNWPHLITSIVADFLPLLWPSNPSFLFPEC
LMGSCQYTQLQEYIRLLQPWCHVNMGSCCFMMGRCYLVMGEGHKALDCFCQAASEVGREE
FLDRLIQPEEGEVVSTPRLQYYNKVLRLLEMLGLPELVIELATLAIMESADDWRSQATLR
TCIFKHHLDLGHNSEAYVALTQNPDPGRQLDCLRQLVVVLCERSQLQDLVEFPYVNLHNE
VVGIIESHARAVDLMTHNYYELLYAFHVYRHNYRKAGTVMFEYGMRLGREVRTLRGLQKQ
GNCFLAAINCLRLIRPEYAWIVQPASGAVYERPGASPKRSHDGECMAVPTTRQIEILELE
DLERECLLARIRLTLVEHDVSAAAVAGNSTPEETVSLLVRAGLFDSAITLCQTFKLPLTP
IFEGLTFKCIKLQLGGEAAQAKAWDWLAANQLSALVTTKESSATDEAWRLLSSYLERYPS
QNSLYHRCVINKLLAHGIPLPNWLINRYKEVDAAELLRLYLNYDLLEEAVDLVLEYVDAV
LGKGHQYFGIEVPLSPASPTMWLPYTAIDQLLQALRESSASENSVVLYDKLNDRMEDYQQ
KVSVATMERLYCRP
NT seq
4185 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggctctggcggcgcggagctgcctggagctgagcgcggccggccgggccccg
ccgcgacccccgcaggagctgctcttcgagccccccggcatcgccccgctccccgccggg
cgctacggcgacagcgccggcggcttctgctaccaagagagcgcgcagctcggggccgcc
accaggaatcgctgggtgcgatggagcacgtcgggggacacggtggagctggtggaggag
tccctggacgtgaacctgctgaacaacgctgtgcggctgcggatccagggctgcccgttc
ctgccgggcgggatccacctgtgcgaggtgcagagtcacctggtggtgctgctgctcacg
gcgcagacggtgcaccggctgctgctcccgcaccccgcccgcctctaccgcagcgagctg
ataacggagagccaagtgcagtccgtgtttacagatatcagcaaaatccacatcagggat
ccctccaattactacgtgattcccagcgtgccggggctggctcccaactccgtggcctcc
gcggcctggctgagcagcgagggagaggctctcttcgcccttccctctgcctcaggaggg
atctttgtccttaagttgcctcctcccgatgctcctgggagtgtttctgtcgtggagttg
aagcagagctcggtggtgcagcgtttcctcacaggctggatgccaactgccatcagaggt
gatggcggcccctcggatgtgcctgtcagcctctctgtgcactgcctggatcatgatgcc
ttcctcttcgccctctgccaggaccataagctccggatgtggtcctacaaggatcagatg
tgcctgatggtggcggatctgctggaattcatgccggtcagcagggacctgcggctggcg
gccggcaccgggcaccgcctgcgcctggccttctcccagtccttgggcctgtacctggga
gtctacatgcacgctcccaagcgagggcagttttgtgtcttccagctggtgagcactgag
agcaaccgctacagccttgaccacatctcatccctgttctcctcacaggagactctggtt
gactttgccttaacctcagctgagatctgggcactgtggcacaacgaggagaaccaaact
gttgtgaaatacatcaactttgagcagaatgttgcaggccagtggaaccaggtgtttgtg
cagccactccctgaagaggaggtgacggtccggcaggatcaggaccccagggaaatctac
ttggaatatctcttcatgccgggtcggttcactaatgcagctatccataaggctttgcag
atcttttctcaaggaactgagaggcacatggatctgacatgggatgagttaaggaaagaa
gtcaccttagctgtggaaaacgagttccaggccagtgtgacagaatatgagtgctcccca
gaggagttttggcagctgcaggtggaattctggtccaagttctatgcctgctgcctgcaa
taccaggaagctctttcccggcccctggccttgcacctgaacccctacaccagcatggtg
tgcctgctaaagaagggctccatgtccttccttgtgccctgctccttggttgatcatctc
tatctcctctccaatgagcacctcctgactgaggacgatgctgccatctttgaagatttg
gagatgtctcgtgatgttgtctgtcttgtccagtgccttcgcctgattggagaatcaatt
tctatggaaatggcattcatcatggaaatggcttgctcccgcctccagcctccagaaaag
gctgcagagcagatcctggaggacttgatagctaatgacacggaaaatgtgatggaggat
atccacagcaaactgcaggagatcaggaaccccatccatgccattggattgctcatccga
gagatggactacgagacagatgctgacatggaaagagctcctcacctggcgctgcgcatg
agcctgtcccagctgtttggcagcagcaccgcggcgcacgtggtgtgcgggggggtggcc
aagatctgcaccgtccgcttcctcctctgccgggacctgctcatcctccagcagctcctg
ctgcgcctcggagatcctatggttttgggagggggacagctcttccagtcccagcaggac
ttgctgcaccgcacctctcccctgctgctgtcctacttcctgatccggtgggcgagccag
tgcctgacctccgacgtccctgtggacacgctggaatctaatctgcagcatctctctgtg
ttggagttagcagacaccacggccctgacaccacacaaactggtatccagccctcagaca
atcgtggagctcttctttcaggaagtggccagaaaacacatcatatcccgactcttcctg
caaccaaacacctctttggctgagacaagtttgaactggccccaccttatcacctcaata
gtggctgattttctgcctctcctatggcccagcaatcccagcttcctcttcccagagtgc
ctgatggggagctgtcagtacacccagctccaggaatatatccgactgctgcagccatgg
tgccatgtgaacatgggctcctgctgcttcatgatgggcagatgctaccttgtcatgggt
gaagggcacaaggctttggattgcttctgccaagctgcctctgaggtgggaagagaggag
ttcctggacaggctgatccagcctgaggagggtgaggtggtctccacgccacgcctgcag
tactacaacaaggtccttcgcttgttggagatgctgggtttgccagagctggtcatcgag
ctggccaccctggccatcatggaatcagcagatgactggagaagccaggctactttgagg
acctgcatcttcaaacatcatttggatttggggcacaacagtgaagcatatgtagcctta
acacaaaacccagatccaggcaggcagctggactgcctacgccagctagtggtggttctc
tgcgagcgatcccagctccaggacctggtggaatttccttacgtgaacctgcacaatgag
gtcgttgggatcatcgagtcccacgctcgggccgtggatctgatgactcacaactactac
gagctgctctacgccttccacgtgtaccggcacaactaccggaaagctggaacagtgatg
tttgagtacggcatgcggctgggcagggaggtgcggacgctccgagggctccagaaacag
ggaaattgtttcctggctgccattaactgcctgcggctgatccgcccggaatatgcctgg
atagtgcagccagcctctggagctgtgtacgagcgcccgggagcatccccgaagaggagc
cacgatggggaatgcatggctgttcccaccactcgccagatcgagatcctggagctggag
gatttggagagggaatgtctgctggcacggatccggctcaccctggtggaacacgacgtg
tcggcagcagctgtggcaggcaactccacgcctgaggaaacggtgtctctgctggtccgg
gccgggctcttcgactcagccatcaccctgtgccaaaccttcaagctgcccttgacaccc
atctttgagggcctgaccttcaagtgcatcaagctccagctgggaggtgaagcagcacag
gcaaaggcctgggactggctggcagccaaccaactctcagccctggtcaccaccaaggag
tccagtgccacagatgaagcctggaggctgctgtcatcctacctggagcgttacccatcc
cagaacagcctgtaccatcgctgtgtcatcaacaagctcctggcacacgggatacctctg
cccaactggctcattaacagatacaaggaagtggacgctgccgagctgctgcgcctgtac
ctgaactacgatctgctggaggaggccgtggatttggtcctggagtacgtggatgctgtg
ctgggcaaaggtcaccagtattttgggatcgaggtccctctgtccccagcgtcccccacg
atgtggcttccctacactgccattgaccagctgctgcaggcgctgcgggagagcagcgcc
agcgagaacagcgtcgtgctctatgacaagctgaacgacaggatggaggactaccagcag
aaggtcagcgtggccaccatggagcgcctgtactgccggccctag
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