Vidua macroura (Pin-tailed whydah): 128808983
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Entry
128808983 CDS
T11570
Symbol
VPS50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
vmc Vidua macroura (Pin-tailed whydah)
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vmc04131
]
128808983 (VPS50)
Membrane trafficking [BR:
vmc04131
]
Protein recycling
Others
EARP complex
128808983 (VPS50)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
EF-G-binding_N
Motif
Other DBs
NCBI-GeneID:
128808983
NCBI-ProteinID:
XP_053836652
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All DBs
Position
1:23756432..23837012
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AA seq
967 aa
AA seq
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MQKIKSLMTRQGLRSPQESVNDLSPIENLRIPTKEELRELHEEPTDPQAQQEIINSIEEV
YFSNDSFDIVKYELERLPPVLSLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVEELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQTSLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHITSDSYIPCLADLCKALWEVMLSYYRTMQWHENHDQDEAAVVSSV
SDGNNVIGSEENSFDRNYVKKKLEHGLSRIWQDVQLKVKTYLLGTDLSNFKYDDFIFVLD
VISRLMQVGEEFCGSKSEVLQESIRKQSVNYFKTYHRTRLEELRMFLENETWELCPVKSS
FSILQLHEFKFMEQSRSPSVSPSKQPASAVSSTVTLFEQYCAAGNPFEIQADSKDDETED
VLASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPIKSVSRETLRSRKRSDY
NLNKVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAVYTFFGRN
DMFESTGLGLSSSRLRTTLNRIQESLIDLEVSADPSGTLTAAEERKEKVPSPHLSHLVVL
TSGNSLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAAKKPFLQQFYSQTVSTASELR
KPVYWIVAAKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDALLKEFEEFNRRLNDVSKRV
RIPLPVSNILWEHCIRLANRTLVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPI
PDKEFVETYIKAYYLTENDMESWIKEHREYSTKQLTNLVNICLGTYINKKARQKLLAAID
DTDRPKR
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtcgctgatgacccgccagggtctaagaagtcctcaggagagtgtt
aatgacctcagtcctattgaaaacttgcggattcctactaaggaggagctcagagaacta
catgaagaaccaactgatcctcaggcacaacaagaaataattaacagcattgaagaagtt
tatttttccaatgactcctttgatattgtgaagtatgagttagagaggcttcctccagta
cttagtcttcaagaactagaagagtacagagacaaactaaaacaacagcaagctgctgta
tctaagaaagttgcagatttaatccttgaaaaacagcctgcatatgttgaggaacttgaa
cgtgttacatcattgcagactggccttcagctagcagcagttatttgcacaaatggaaga
agacacttgaatatagcaaaggaagggttcacacaaactagtttggggctccttgcaaat
cagaggaaacgacagttgcttattggactgctaaaatctctgagaacaataaaaacactg
caaagaactgatgtgcgtttgagtgagatgttggaggaggaggattatccaggagctatt
caactatgcttggaatgccagaaagctgccagcactttcaaacactacagttgtataagt
gagttaaattcaaaactgcaagacaccttggaacaaatagaggaacaattggacgtagca
ctttccaaaatatgcaagaattttgatatcaatcattatacaaaggttcagcaggcttac
aggctgcttggaaaaacacagacagcaatggaccagttacatatgcacttcacccaagca
attcacaacactgtgtttcaagtagtccttggatatgtggagctgtgtgcaggaaacaca
gacaccaagtttcagaagttacagtacaaagacctctgtacacacatcacctcagacagc
tacattccatgccttgctgatctctgcaaagccctctgggaagtcatgctcagttactac
cgaacgatgcagtggcatgagaaccatgaccaagatgaggcagcagttgtgtcttctgtt
tcagatggcaacaatgtgattggaagtgaagagaacagttttgaccgcaactatgtaaaa
aagaaattggagcatgggctttcacgaatatggcaggatgttcaattgaaagtgaaaact
tatcttctgggaacagatctgtctaacttcaaatacgatgacttcatatttgtacttgat
gttatcagcaggctgatgcaggttggagaagaattttgtggcagtaagtctgaagttttg
caagaatctatcagaaaacaaagcgttaactatttcaaaacataccacagaacccgtctt
gaagaactaagaatgtttttggagaatgagacctgggaactttgtcctgttaaatcaagc
tttagtattttgcagcttcatgaatttaagttcatggagcagtcgcgttccccatccgtg
tcaccgagcaagcagcctgcctcagcagtttcatcaacggtgacgctgtttgagcagtac
tgcgccgcaggaaaccccttcgagattcaggccgacagcaaagatgatgagacagaagat
gtgttagcttccaatgggtatgaatcagatgaacaagaaaaaagtgcatatcaagagtat
gatagtgacagtgatgttcctgaagagttgaaaagagattatgtggatgagcagacagga
gatgccccaataaaaagcgtttctcgagaaactctgaggagcagaaagagatcagattat
aacctcaataaagtgaatgcacctattctaaccaacactacactgaatgtaataaggctt
gttgggaaatacatgcagatgatgaatattctgaaacctatcgcatttgatgtgatccac
ttcatgtcccagctctttgattactatctgtatgcagtctatacattttttggccgaaat
gacatgtttgaatcaacaggactgggcctcagtagcagcagattacgcaccacactgaac
agaatccaggagagtctgattgatctggaggtgtctgctgatccttcaggaactctcaca
gctgctgaagagagaaaagagaaggtgccaagcccacatctcagtcatcttgtagttttg
acatctggcaattcgctgtatggtttggcagagagagtggtggccacggaatccttggta
tttctggctgagcagtttgaatttcttcagcctcatcttgatgcagtgatgccagctgcc
aagaagccttttcttcagcagttctattctcagacagtgtcaactgccagtgaactacgt
aaaccagtttattggattgttgctgctaaagccattgattatgaacaaatgcttcttctc
atggctaatgtgaaatgggatgtgaaggaaatcatgtcacagcacaacatatatgtagat
gctcttttaaaggaatttgaagaatttaacaggaggttgaatgatgtgtctaagagagtt
cgtattccattgccagtctccaacatcctttgggagcactgcatacgcttggccaataga
actcttgtggaaggttatgccaatgtgaagaagtgcagcaatgaaggacgtgccttgatg
caactggattttcaacagttcttgatgaaactagaaaagttaacagacattaggcctatt
ccagataaagaatttgtggagacctacattaaagcatactacctgacagaaaatgacatg
gaatcctggataaaagaacatagggaatattccactaagcagttgaccaatctggtgaat
atttgtctgggcacctacatcaacaaaaaggcaagacagaagctgttagctgccattgat
gacacagacaggcctaagagataa
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