Vidua macroura (Pin-tailed whydah): 128809162
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Entry
128809162 CDS
T11570
Symbol
TAF2
Name
(RefSeq) transcription initiation factor TFIID subunit 2 isoform X1
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
vmc Vidua macroura (Pin-tailed whydah)
Pathway
vmc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128809162 (TAF2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vmc01002
]
128809162 (TAF2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vmc03021
]
128809162 (TAF2)
03036 Chromosome and associated proteins [BR:
vmc03036
]
128809162 (TAF2)
Peptidases and inhibitors [BR:
vmc01002
]
Metallo peptidases
Family M1
128809162 (TAF2)
Transcription machinery [BR:
vmc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
128809162 (TAF2)
Coactivators
SAGA/TFTC/STAGA complex
128809162 (TAF2)
Chromosome and associated proteins [BR:
vmc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
128809162 (TAF2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_TAF2_C
TAF2_3rd
HEAT_2
Peptidase_M1
Peptidase_M1_N
HEAT_spiro
SR-25
Motif
Other DBs
NCBI-GeneID:
128809162
NCBI-ProteinID:
XP_053836890
LinkDB
All DBs
Position
1:complement(140910258..140970807)
Genome browser
AA seq
1200 aa
AA seq
DB search
MNRKKGDKGFESPRPYKLTHQVVCINNVNFQRKSVVGYVELTIFPTVANLNRIKLNSKQC
RIYRVRVNDLEAAFIYNDPTLEVCHHESKQRNLNYFSNAYAAAVSAVDPDAGNGELCIKV
PSELWKHVDELKVLKVHINFSLDQPKGGLHFVVPNMEGNMAERGAHVFSCGYQNSTRFWF
PCVDSYSELCTWKLEYTVDAAMVAVSNGDLVETVYTHDMRKKTFHYMLTIPTAASNISLA
IGPFEILVDPYMHEVTHFCLPQLLPLLKHTTSYLHEVFEFYEEILTCRYPYSCFKTVFID
EAYVEVAAYASMSIFSTNLLHSAMIIDETPLTRRCLAQALAQQFFGCFISRMSWSDEWVL
KGISGYIYGLWMKKTFGVNEYRHWIKQELDQIVAYELKTGGVLLHPIFGGGKEKDNPASH
LHFSIKHPHTLSWEYYTMFQCKAHLVMRLIENRISMEFMLQVFNKLLSLASTASSQKFQS
HMWSQMLVSTSGFLKSISNVSGKDIQPLIKQWVDQSGVVKFYGSFAFNRKRNVLELEIKQ
DYTSPGTQKYVGPLKVTVQELDGSFNHTLQIEENSLKHDIPCHSKSRRNKKKKIPLMNGE
EVDMDLSAMDADSPLLWIRIDPDMSVLRKVEFEQSDFMWQYQLRYERDVVAQEEAILALE
KFPTPASRLALTDILEQEQCFYRVRMLACFCLAKIANSMVSTWTGPPAMKSLFTRMFCCK
TCPNIVKTNNFMNFQSYFLQKTMPVAMALLRDVHNLCPKEVLMFILDLIKYNDNRKNKFS
DNYYRAELIDALANSVTPAVSVNNEVRTLDNLNPDVRLILEEITRFLNMEKLLPSYRHTI
TVSCLKAIRVLQKNGHVPSDPALFKSYAEYGHFVDVRIAALEAVVDYTKVDRSYEELQWL
LSMVQTDPVPYIRHKILDMLTKNPPFTKNMESPLCNEALVDQLWKLMNSGTSHDWRLRCG
AVDLYFTLFGLSRPSCLPLPELGLVLNLKEKKAVLNPTIIPESVANNQEPVNSSNNHGQP
VGFQNTEDDHLIKETASSISGHQQGVKRKADMPLGSPLEPGQILEKNEDSKVKLKIRFSN
SQEEEEIDMDTVHDSQAFIYHHLNMLERPSTPGKEQSSGEIIMHPVSAAPLSVFSKESNS
SKHSDHHHHHHHEHKKKKKKHKHKHKHKHKHDTKEKEKDPFVFSNSPASARSIRSPSLSD
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgaataggaagaaaggagacaaaggatttgaaagcccaagaccctataaattaactcat
caggtagtttgtatcaacaacgtaaattttcagagaaagtctgttgtaggttatgtggaa
ctcacaatatttcccacagttgcaaacctgaacagaatcaagctgaacagtaaacagtgc
cggatttacagagtgagagtcaatgatttagaagcagctttcatctataatgatccaaca
ctggaggtctgtcaccatgagtcaaagcagaggaatctcaactatttctccaatgcctat
gctgctgctgtcagtgctgtggacccagatgctggaaacggagagctctgcattaaggtt
ccctcggagctgtggaaacatgttgatgagttaaaagtcctgaaggtgcatataaacttt
tctctggaccagccaaaaggaggccttcattttgtggtacccaacatggagggcaacatg
gcagaaagaggggctcatgtcttttcatgtggttatcaaaattccacaagattttggttt
ccttgtgtggattcctattctgagttgtgtacctggaaacttgagtatactgtagatgct
gcaatggtggctgtttcaaatggagatttggtggaaactgtatacacccatgatatgaga
aagaagacttttcattacatgttgactattccaactgcagcttctaacatctccttggca
attggaccttttgaaatccttgttgatccatacatgcatgaggtaactcacttttgttta
ccacaacttcttccactactcaaacataccacatcataccttcatgaggtgtttgaattt
tatgaggagattcttacctgccgctatccttactcctgtttcaagactgtttttatagat
gaagcttatgttgaagtagctgcttatgcatccatgagtattttcagcacaaatctcttg
cacagtgcaatgattatagatgaaactccactgacaaggagatgcttggcacaggccctg
gcccagcagttctttggatgtttcatatccagaatgtcctggtcagatgaatgggtgcta
aagggaatatctggttacatttatggcctttggatgaaaaaaacctttggtgttaacgag
tatcgccactggattaaacaggagttagatcaaatcgtggcatatgaactgaagactgga
ggagttttactgcatccaatattcggaggaggaaaagagaaagacaaccctgcttcacat
ttacatttttctatcaaacaccctcatacactgtcctgggaatattacactatgttccag
tgtaaagcacatcttgttatgagactgattgagaacagaattagcatggagttcatgtta
caggttttcaacaaattgttgagtctggccagtactgcttcatctcagaagttccagtca
cacatgtggagtcagatgttggtttccacatctgggtttttgaaatctatctcaaatgtc
tcaggcaaagacatccaacctttaataaagcagtgggtggatcagagtggagtggtaaaa
ttttatggtagctttgcatttaatagaaaacggaatgtactggaattggaaataaaacaa
gattacacatctcctgggactcagaaatacgtgggtcctcttaaagtgacagtgcaagaa
cttgatggctcattcaaccatacattgcagattgaagaaaacagtcttaaacatgatata
ccgtgccattctaaaagcagaagaaataagaagaaaaagattccactgatgaatggagaa
gaggtggacatggacctttctgctatggatgctgattcccccttgctctggataagaata
gatcccgatatgtcagtactgaggaaggtggaatttgagcagtctgatttcatgtggcag
tatcagctgagatatgagagagatgtggtggcacaagaagaagccattctggcactggaa
aagttccctactccggcatcccggcttgcgctgactgacatcctggaacaggagcagtgt
ttctaccgcgtgagaatgctggcctgcttctgccttgcaaagattgcaaattccatggta
agtacgtggacaggaccaccagccatgaagtcactctttacccgaatgttttgttgtaag
acttgtccaaacattgtgaagaccaacaacttcatgaactttcagagctactttcttcaa
aagacaatgcctgttgccatggcccttctgagagatgttcacaacctttgtcctaaggag
gttttaatgtttattttggatttgatcaagtacaacgataacaggaagaataagttttca
gacaactactatcgtgctgaactgattgatgccctagccaactctgtgactcctgcagtc
agtgtgaacaatgaagttcgaacactggataacttaaatcctgatgtacgacttattctt
gaggaaattacccgttttctgaacatggagaagcttcttcccagttacagacatactatc
acagtcagctgtttaaaagctattcgagtgcttcagaagaatggtcatgtcccaagtgat
cctgctctcttcaagtcatacgcagaatacgggcacttcgttgatgttaggatagcagca
ctggaggctgttgttgattatacaaaagttgataggagctatgaagaattacagtggcta
ctgtctatggttcagactgatcctgtaccttacataaggcataagattttggatatgctg
actaagaatccacctttcaccaagaatatggagtcccccttatgtaatgaagctttggta
gatcagctttggaaactgatgaattcaggaacttcacatgactggagattacgatgtggt
gctgtggacctctatttcacactctttggcctcagcagaccttcctgtttaccattacca
gagcttggacttgttcttaacctgaaagaaaagaaggctgtactcaatccaacgattatt
cctgaatcagttgcaaataatcaggaacctgtgaacagttctaacaatcatggacagcca
gtaggatttcagaacaccgaggatgatcatcttattaaggaaacagcatccagcatttct
ggtcatcagcagggggtgaagaggaaggctgatatgccactcgggtctccattggagcca
gggcaaatactagagaagaatgaagacagtaaagtcaaactcaaaatcagattctcaaac
tctcaagaggaagaggaaattgatatggacacagttcatgacagccaagccttcatttac
catcatttgaatatgctggagagaccatccacaccaggtaaggaacagtcttcgggagag
ataatcatgcaccctgtctcagcagctccactctctgtgtttagcaaagaatcaaactcc
tcaaaacacagcgatcaccatcaccatcaccaccatgagcacaagaaaaagaagaagaaa
cacaagcataagcataagcataaacataaacatgatactaaagaaaaggaaaaggatccc
tttgttttctctaacagtccagccagtgcacgatcaatccgttccccgtcactttcagac
tga
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integrated database retrieval system
