Vidua macroura (Pin-tailed whydah): 128809362
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Entry
128809362 CDS
T11570
Symbol
NFATC1
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 1 isoform X1
KO
K04446
nuclear factor of activated T-cells, cytoplasmic 1
Organism
vmc Vidua macroura (Pin-tailed whydah)
Pathway
vmc04010
MAPK signaling pathway
vmc04020
Calcium signaling pathway
vmc04148
Efferocytosis
vmc04218
Cellular senescence
vmc04310
Wnt signaling pathway
vmc04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128809362 (NFATC1)
04310 Wnt signaling pathway
128809362 (NFATC1)
04020 Calcium signaling pathway
128809362 (NFATC1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
128809362 (NFATC1)
09143 Cell growth and death
04218 Cellular senescence
128809362 (NFATC1)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
128809362 (NFATC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vmc03000
]
128809362 (NFATC1)
Transcription factors [BR:
vmc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
128809362 (NFATC1)
SSDB
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Paralog
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Motif
Other DBs
NCBI-GeneID:
128809362
NCBI-ProteinID:
XP_053837266
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All DBs
Position
1:complement(60409123..60523319)
Genome browser
AA seq
982 aa
AA seq
DB search
MPSAAPPAAAAPPSRDPSSGRERPAAAPQDGARPLGSTMKAAEEEHYNYASSNVNAGLPL
NVAHSSLSTPCHGLQTSNPVISVVPSTNHPSGYEGHIDSGASEYYLPPNMRPNGAPALES
PRIEITSYMGLHHNNNQFFHDEVEEAIPNAKRSPSTATLNLPNIEAYRDPSCLSPASSLS
SRSCNSEASSYESNYSYPYTSPQTSPWQSPCVSPKTTDTEEGYQRSMVACTLLSSPRHSP
STSPRTSITEESWLGTRNSRPPSPCNKRKYSLNGRQTSYSPHHSPTPSPQNSPRVSVTDD
TWLGNTNQYTSSAIVAAINALTTDSTIDMNDGIPIKSRKTTIDHTPSMTLKTEPTGEDPG
TISPTADLSPEDFTSFQHIRKGNFCEQYLSVPQHPYQWAKPKPLSPTSYMSPSLPALDWQ
LPSHSGPYELRIEVQPKSHHRAHYETEGSRGAVKASAGGHPIVQLHGYLESEPLTLQLFI
GTADDRLLRPHAFYQVHRITGKTVSTTSHETILSNTKVLEIPLLPENNMRAIIDCAGILK
LRNSDIELRKGETDIGRKNTRVRLVFRVHIPQASGRTLSLQVASNPIECSQRSAQELPLV
EKQSTDSFPVTGGKKMVLTGHNFLQDSKVIFVEKAPDGHHVWEMEAKTDKEMCKPNSLVV
EIPPFRNQRITSPVQVNFYVCNGKRKRSQYQLFTYLPANVPIIKTEPTDDYEPTQTCGPM
NQDLSPLSKPYYSQQIMMPTDPGSCLVASFASCQQRNAVMSPSPNASPKLHDLSSSPYKC
IPNPGHSHLGLQQPAGGVPTIQEVPRSIVVHPSPPEQSSHVMLQPQVSQHLSSSCPLGYQ
QTLYPNSPSSPVPSVTQEPTYLQSCSPTHSSIMGQQQQQLPKVHRNESPTTQPLSLPELH
EESNHNLAPIPVMIKREPEELDQMYLDDGKSSTAQVCVHHVALSMSFLKPPSFESLWKKV
PLIAWWKGVDFTWIVFIQEKAL
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgccaagcgctgccccgccggctgccgccgcgccgccgtcgcgggacccatccagcggg
agagagaggccggcggcggccccgcaggacggcgcccgcccgctcggcagcaccatgaag
gcggcggaggaagaacactataattatgcatcttcaaatgtaaatgctggcttgcctcta
aatgtggcacattcctcattgtcaactccatgtcatggcctgcagacatcaaatcccgtc
atttcagttgtcccatcgacaaaccatccctctggatatgaaggacacattgacagtgga
gcctccgagtactacctgccaccaaacatgagacccaatggagctccagcgctggagagc
cccagaattgagatcacatcttacatgggattgcatcataacaacaaccagtttttccat
gatgaggtggaggaggccatccctaacgccaagcggtcgccttccactgccactttaaac
ttgccaaacatcgaggcatacagagacccatcctgcctcagtccagcgagtagcttgtct
tccagaagctgcaactctgaagcatcttcctatgagtccaactactcgtatccatatact
tcacctcagacctctccatggcagtccccatgtgtctctccgaagaccactgacacagag
gagggctaccagcgcagcatggtggcctgtactttgctcagttccccaaggcactctcca
tcaacgtctcccagaacgagcatcacagaggagagctggctggggactcgcaactccagg
cctccatctccctgcaacaaaaggaagtacagcctcaatggccggcagacctcctattcc
ccacaccactcccccactccttctccacaaaactcaccgcgggtgagtgtcacagatgac
acgtggctggggaacacaaaccagtacaccagctctgccatcgttgctgccatcaacgcc
ctcaccactgacagcaccatcgatatgaatgatgggattcccatcaagtcgaggaagacc
accattgatcacaccccatccatgactctcaaaactgaaccgactggcgaggatcctggg
accatatcaccaactgccgatttgtcaccagaagacttcaccagctttcagcacatcagg
aaaggaaacttctgcgagcagtacttgtctgtgccacagcatccctaccagtgggccaaa
ccaaagcctctatctccaacatcctacatgagcccatccctgcctgctctggattggcag
ctgccatctcactcaggaccttacgaactgcgcatcgaagtgcagccaaaatcccaccac
cgagctcattacgagacagaaggcagtcgaggggctgtgaaagcatctgcgggggggcac
cccattgtgcagctccatggttacttagaaagcgagccactcacgctgcagctgttcatt
gggactgcagacgaccgcctgctgcgaccccatgccttctaccaggttcaccggatcact
ggcaagaccgtttccaccaccagccatgaaacaatactttccaacaccaaagtcctggaa
attccacttcttccagagaacaacatgagagcaatcattgactgtgctgggatattaaag
ctccgaaactctgacatcgagctgcgcaagggagagacagacatcggtcggaagaacaca
cgtgtgcgtctggtgttcagggttcatatcccacaggccagtggcaggaccctctccttg
caagtagcctccaaccccattgagtgctctcagagatctgcccaagaactgcctctggtg
gagaagcaaagtaccgacagttttcctgttactggagggaaaaaaatggtactgactggt
cataactttctgcaagactccaaagtcatctttgtggagaaagctccagatggtcaccat
gtgtgggaaatggaagccaaaaccgacaaagaaatgtgcaagccaaattcattggtggtt
gagataccacctttccgcaatcagagaattaccagccctgttcaggtcaacttctatgtc
tgcaacgggaaaagaaagagaagccagtaccagcttttcacctatcttcctgctaatgtt
ccaattataaaaacagaacccacagatgactatgagcctactcaaacctgtggaccaatg
aaccaagacttaagccctctctctaaaccatactacagtcagcagatcatgatgcccact
gatcctggttcgtgcctcgtggccagctttgcctcctgtcagcagagaaacgctgtgatg
tcaccttcacccaatgcaagccccaagctgcacgacctttcgtcatctccttacaagtgc
atccccaacccgggccacagtcacctcggacttcagcagcccgctggaggtgtccctacc
atacaggaagtgccaaggtctatagttgtgcacccaagcccccccgagcaatcatctcac
gtcatgctgcagccgcaggtgagtcaacatctgagcagtagctgtccccttggttatcaa
caaacactctatcccaacagtccctcttctccagttccatctgttacccaagagccaacc
tatttgcagtcctgcagtccaactcactcatccataatgggtcaacagcagcagcaactg
ccgaaggttcacagaaatgagtctccaacaacccaaccactgtcattgccagagttgcat
gaggaaagtaatcataatttggcccctattcctgtaatgatcaagcgagaacctgaggaa
ttggaccagatgtacctggatgatggtaagtcttccacggcacaggtttgtgttcaccat
gttgctctatcaatgagtttccttaagcccccttcttttgaatccttgtggaaaaaagtt
ccattaatagcctggtggaaaggtgtggactttacttggattgtctttatacaggaaaag
gccctttaa
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