Vidua macroura (Pin-tailed whydah): 128809802
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Entry
128809802 CDS
T11570
Symbol
ITGB6
Name
(RefSeq) integrin beta-6
KO
K06589
integrin beta 6
Organism
vmc Vidua macroura (Pin-tailed whydah)
Pathway
vmc04510
Focal adhesion
vmc04512
ECM-receptor interaction
vmc04518
Integrin signaling
vmc04810
Regulation of actin cytoskeleton
vmc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128809802 (ITGB6)
04518 Integrin signaling
128809802 (ITGB6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128809802 (ITGB6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
128809802 (ITGB6)
04810 Regulation of actin cytoskeleton
128809802 (ITGB6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vmc04147
]
128809802 (ITGB6)
04515 Cell adhesion molecules [BR:
vmc04515
]
128809802 (ITGB6)
Exosome [BR:
vmc04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
128809802 (ITGB6)
Cell adhesion molecules [BR:
vmc04515
]
Integrins
Integrin beta subunits
128809802 (ITGB6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
PSI_integrin
EGF_integrin
I-EGF_1
EGF_2
EGF_TEN
EGF_Teneurin
vWA_SIBA-E
DUF8130
DUF2970
Motif
Other DBs
NCBI-GeneID:
128809802
NCBI-ProteinID:
XP_053838077
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All DBs
Position
7:24450656..24483124
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AA seq
789 aa
AA seq
DB search
MGIELLCLCFLFLQRNNYVQGTCSQESTVTCEDCLLSGPHCAWCLQENYTDSSGIHGRCD
TLENLLSKGCQLNFIEFPISEVEIHRNDPLTASSHKNGSDVTQISPQKLTLRLRPGHEET
IQIKVHQTEDYPIDLYYLMDLSASMDDDLNTIKELGSTLSKEMSKLTSNFRLGFGSFVEK
PVSPFIKTTAAEINNPCRSVPYECLPTFGYKNVLPLTNDAEKFNEIVKGQRISANIDTPE
GGFDAIMQAAVCKEKIGWRNDSLHLLVFVSDADSHFGMDSKLAGIVIPNDGNCHLDHNNE
YSMSTVQEYPTIGQLIDKLVQNNVLLIFAVTNEQVHIYENYAKFIPGATVGRLQKDSGNI
LQLIIAAYQELRSEVELEILGETEGLNLSFTAICNNGTFFPHQRKCSHVKVGDTVSFNVT
VSLSSCEKTRRLIKIKPVGLSDMLEMEIHPLCSCNCQAKTEKKSPKCSQGKGSLECGVCV
CSPGYVGPRCECHESSLGASSCRGPAEHSSCSGRGDCYCGQCLCHPSPYGKVYGPRCECN
DFSCVRHRGLQCAGNGDCDCGECRCHSGWTGEYCNCTTDTSTCIAEDGTLCSGRGECICG
TCACTHPGALGQTCEKCPLCGDPCSSRWSCVECHLASDDKSLGDCSEKCRLVDATVSMAK
DYSEDKSISCSLQGENECITTFLLAVDEQGRTVIHSIERKDCAQHPNIPMIVVGVTLAIL
LIGIVLLCIWKLLVSLQDRKEVAKFEAEKSKVKWQTETNPLYRGSTTTFKNVTYKNQDMH
KRPMAADFY
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggggattgaattgctttgcctctgtttcctattcctgcaaagaaataactatgtgcaa
gggacctgttctcaggaaagcacagtgacttgtgaagattgtttgctttccggaccacac
tgcgcttggtgtttgcaagagaattacacagactcatctggaattcatgggaggtgtgat
accctggaaaatcttttgtctaaaggatgccagctgaatttcattgagtttcctatttca
gaagtagaaattcacagaaatgatcccctaactgcatcatcccataagaacggttctgat
gtcacacagatttctccccagaaattaactctgaggctgcgaccaggacatgaagaaaca
atacagatcaaggttcaccagactgaagattatccaattgatctctactacctcatggat
ctttcagcttccatggatgatgacctgaatacaatcaaagaactgggttcaactctttcc
aaagagatgtcaaaactgacaagcaactttagactggggtttggatcttttgttgaaaaa
ccagtttcaccatttatcaaaactacagctgcagaaataaacaacccttgcagaagcgta
ccatacgagtgcttacccacctttggatataaaaatgttttgcccctaacaaatgatgct
gaaaaattcaatgaaattgtgaaaggacagcgaatttctgctaatatagacactccagag
ggaggatttgatgcaattatgcaggcagctgtttgcaaggaaaaaattggctggaggaat
gattctctgcatttgctggtgtttgtgagtgatgctgattcccattttgggatggacagt
aaactggcagggattgttattcctaatgatgggaactgtcatttggaccacaataatgaa
tattccatgtcaactgttcaggagtatccaacaattggacaattaattgacaaacttgtg
caaaacaatgttctattaatttttgctgtaacaaatgagcaagttcacatatatgagaat
tatgcaaagtttattcctggtgctaccgttggacgactacagaaggattctggaaatatt
ctccagttgatcattgctgcatatcaggagctgaggtctgaggttgaattggagatcctg
ggagagacggaagggctcaatctctccttcacggccatctgtaacaacgggacctttttt
ccacatcagaggaaatgctctcatgtgaaagtgggagatacagtttctttcaatgtgact
gttagtctctcttcttgtgaaaaaaccagaaggcttatcaagataaaacctgtgggactc
agcgacatgctggagatggaaattcatcccctctgcagctgtaactgccaggccaagacc
gagaagaagagcccaaagtgcagccaagggaaaggctccctggagtgtggggtgtgcgtg
tgcagccctgggtacgtggggccacgctgcgagtgccacgagagctccctcggtgccagc
tcctgcaggggcccggccgagcacagctcctgcagcgggagaggcgactgctactgtggg
cagtgcctgtgccacccgtccccctacggaaaggtctacgggccccgctgtgagtgcaac
gacttctcctgcgtcaggcaccgcgggctgcagtgtgcaggcaatggtgactgtgactgt
ggggagtgcaggtgccacagtggatggactggtgaatactgcaattgcacaactgatacc
agcacctgcattgctgaggatgggacactgtgcagtgggagaggtgaatgcatctgtggg
acatgtgcttgcacccatccaggggctttgggccaaacgtgtgaaaaatgccctctctgc
ggtgacccctgcagttccagatggagctgtgtggaatgtcacttggcttctgatgacaag
tcactgggagattgcagtgaaaaatgcagattggttgatgcaactgtcagcatggcaaag
gattattcagaggataaatccatttcctgctctttgcagggggaaaatgaatgtataacc
acatttctactggctgtggatgaacagggaaggacagtcattcacagcatagaacggaaa
gactgtgcacagcatccaaatatcccaatgatagtggtgggtgtcacccttgctatcctt
ctcattggcattgttttactttgtatatggaaattactggtgtcacttcaagaccgaaaa
gaggtggccaagtttgaagcagaaaaatcaaaagttaaatggcaaacggaaactaatcca
ctctacagaggctcaacaaccacttttaaaaatgtgacttacaagaaccaagatatgcat
aaaagacccatggctgcagatttctattag
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