Vidua macroura (Pin-tailed whydah): 128809856
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Entry
128809856 CDS
T11570
Name
(RefSeq) sodium channel protein type 1 subunit alpha-like
KO
K04833
voltage-gated sodium channel type I alpha
Organism
vmc Vidua macroura (Pin-tailed whydah)
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vmc04040
]
128809856
Ion channels [BR:
vmc04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
128809856
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
New_glue
IQ
SieB
Lustrin_cystein
FraC
ATP-synt_B
Motif
Other DBs
NCBI-GeneID:
128809856
NCBI-ProteinID:
XP_053838210
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All DBs
Position
7:22210122..22301465
Genome browser
AA seq
2013 aa
AA seq
DB search
MEQSVLVPPGPDSFQYFTRESLAAIEQRIAAEKAKNPKQDRKDDDENGPKPNSDLEAGKT
LPFIYGDIPPGMVSEPLEDMDPYYINKKTFIVLNKGKAIFRFSATSALYILTPFNPLRKI
AIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKIIARGFCL
EDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPENFTLETNITSQLNSTIG
ENGTLVNSTVTPFDWKGYIEDESHFYFLEGQNDALLCGNSSDAGQCPEGYTCVKAGRNPN
YGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLIL
AVVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEAAQAAAVTTAAVTASAESREPSA
AGEAGGLSESSSDASKLSSKSAKERRNRRKKRKQKEQSGGEEKDEDEFHKSESEDSIRRK
GFRLSIEGNRLTYEKKYSSPHQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDVGSENDFAD
DEHSTFEDNDSRRDSLFVPRRHGERRNSNISQASRSSRMLAVFPVNGKMHSTVDCNGVVS
LVGGPSVPTSPVGQLLPEVIIDKPATDDNGTTTEPEMRKRISGSFHVSMDFLEDPALRER
AMSIASILTNTVEELEESRQKCPPCWYKFANIFLIWDCSPHWLKVKHIVNLVVMDPFVDL
AITICIVLNTLFMAMEHYPMTDEFNNVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGW
NIFDGFIVTLSLVELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGN
LTLVLAIIVFIFAVVGMQLFGKSYKECVCKISSDCELPRWHMQDFFHSFLIVFRVLCGEW
IETMWDCMEVAGQAMCLTVFMMVMVIGNLVVLNLFLALLLSSFSADNLAVTDDDNEMNNL
QIAVARMQKGIDYVKRKAREFIQKAFVKKQKALDEIKPLEDLNNKNSCISNHTTVELSKD
HDYIKDANGTTSGIGTGSSVEKYIIDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEF
SSESDLEESKEKLNSSSSSEGSTVDIGLPAEEQPEAEPEEAQEPEACFTEGCVRRFKCCQ
VSIEEGRGKQWWNLRKTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLE
YADKVFTYIFILEMLLKWVAYGYQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIK
SLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKF
YYCVNTTTDERFEVDQINNFSQCEELIKNNQSARWKNVKVNFDNVGFGYLSLLQVATFKG
WMDIMYAAIDSRDVLEQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKF
GGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPGNKFQGMVFDFVTQQVFDISIMILICL
NMVTMMVETDDQSKEMENILYWINLVFIVLFTGECVLKLISLRHYYFTIGWNIFDFVVVI
LSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNI
GLLLFLVMFIYAIFGMSNFAYVKREAGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPI
LNSGEPDCDPNKAHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFGVAT
EESAEPLSEDDFEMFYEVWEKFDPDATQFMEFEKLSDFAAALEPPLHLPKPNKVQLIAMD
LPMVSGDRIHCLDILFAFTKRVLGESGEMDALRIQMEDRFMASNPSKASYEPITTTLKRK
QEEVSAVIIQRAYRRHLLKRTVKQASFIYNKNKTEGGAGQGMKDEILIDKLNENSFTEKT
DITASTAVCPPSYDHVIRPVKEKHEKEAKDGQK
NT seq
6042 nt
NT seq
+upstream
nt +downstream
nt
atggagcagtcagtgcttgtaccaccaggaccagacagcttccaatacttcactagagag
tctcttgcagctattgaacaacgcatcgctgcagaaaaagccaagaaccctaaacaagat
cgcaaagacgatgatgaaaatgggccaaaaccaaacagtgacttggaggcaggaaaaaca
ctcccctttatatatggtgacatacctccaggaatggtgtctgagcccttggaagacatg
gatccatattacatcaataaaaaaacctttatagtattgaataaagggaaggcaatcttc
cgattcagtgccacctctgccctgtacattttaacacccttcaaccctcttagaaaaata
gctattaaaattttggtacattcattattcagcatgcttatcatgtgcactattttgacc
aactgtgtatttatgaccatgagtaaccctccagactggacaaagaatgtagagtatact
ttcactggcatttacacatttgagtcactaataaaaatcattgcaaggggcttttgcttg
gaagattttacttttcttcgagatccatggaactggcttgatttcactgtcattaccttt
gcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgagaacattcagagtt
ctccgagctttgaaaacaatatcagtcattccaggcctgaagactattgtaggagccctg
attcagtctgtgaagaagctctcagatgtgatgatcctgactgtgttttgtctgagtgta
tttgcactgatagggctgcagctgttcatgggcaacctgaggaataaatgcctgcagtgg
cctccagaaaattttactttggaaacaaatattacttcccagctaaacagcaccataggt
gaaaatggtacattggttaattccacagtgactccatttgactggaaggggtacattgaa
gacgaaagtcatttttattttctggaagggcaaaacgatgctctgctttgtggaaatagc
tctgatgctgggcagtgcccagaaggatatacctgtgtgaaagctggtagaaaccccaat
tatggctacacaagttttgacaccttcagctgggctttcctgtcactgtttcggctaatg
actcaggacttctgggaaaacctttatcaactgactcttcgtgctgctgggaagacatac
atgatattttttgttctggtgatttttctgggctctttctatctgataaacctgatcctg
gctgtggtggccatggcatatgaagaacagaaccaagcaactctggaagaagcagagcag
aaagaggcagaatttcagcagatgctggagcaactgaagaagcaacaagaagcagcacag
gcggcagcggtgacaacagcagcagtaacagcatctgcagagtccagggagcccagtgct
gcaggagaagcaggagggctctcagagagttcctcagatgcatcaaaattgagctcaaag
agcgcaaaagagaggagaaatagaaggaaaaaaaggaaacagaaagaacagtctggagga
gaggaaaaagatgaagatgaatttcacaagtctgaatcagaagacagcatcagaaggaaa
ggtttccgattgtctattgaaggcaatagactgacatatgaaaagaagtattcttctcca
catcagtctttgctgagcattcgtggctccctgttttccccaaggcgcaacagcagaaca
agtcttttcagcttcagaggtcgagcaaaggatgtagggtcagaaaatgactttgctgat
gatgagcacagcacttttgaagacaatgacagcagaagggattctctctttgtgccgcgc
aggcacggtgaacggcgcaacagtaacatcagccaggccagtaggtcatccaggatgctg
gcagtgtttccagtgaatgggaagatgcacagcaccgtggattgcaatggggtggtttcc
ctggttggtggaccatctgttcctacatcgcctgttggacagcttctgccagaggtgata
atagataaaccagctactgatgacaatggcaccacaacagaaccagaaatgaggaagaga
atatcaggttcttttcatgtttctatggacttcctggaagatccagctttaagggaaaga
gccatgagtattgctagcatcctcacaaacactgtggaagaacttgaagaatcaagacag
aaatgcccaccgtgttggtataaatttgcaaatattttcttgatctgggactgcagtcca
cactggttaaaagttaagcacattgtcaacttagtggtaatggacccatttgttgacctg
gctattacaatttgcattgttttaaatacactctttatggctatggaacattatccaatg
accgacgaattcaataatgtactttcagttggaaatctggtcttcactggaatcttcaca
gcagaaatgtttctcaagataattgcaatggatccttactattatttccaggaaggctgg
aatatttttgatggctttattgtaacccttagcttggttgaacttggtcttgcggatgtg
gaaggactatctgttcttcgatcattcagattgttacgagttttcaaattggcaaaatcc
tggccaacactaaatatgttgataaaaattattggtaattccgtgggagctctggggaat
ctgaccctggtgctggccatcattgtgttcattttcgctgtggttgggatgcagctcttt
gggaagagctacaaggaatgcgtctgcaagatctccagtgactgtgaacttcctcgctgg
cacatgcaagatttcttccactctttcctgattgtattccgagtgctgtgtggagaatgg
atagaaaccatgtgggactgcatggaggttgcaggccaagctatgtgccttacagtcttc
atgatggtcatggtgattggaaacctagtggtactgaacctatttttggccttgctcttg
agctcatttagtgcagacaaccttgctgtgacagacgatgataatgaaatgaacaatctc
cagattgctgtggcaagaatgcagaaaggcatagattatgtgaagagaaaagcacgtgaa
ttcatccaaaaagcttttgttaaaaaacagaaagctttagatgaaatcaagccacttgaa
gatttaaacaacaaaaatagctgtatttctaaccatacaactgtggaactaagcaaggac
catgattatattaaagatgcaaatggaaccaccagtggtataggcacaggcagcagtgtg
gaaaaatacataattgatgagagtgattacatgtcattcataaacaacccaagcctcact
gtgacagtgcccattgctgtgggtgaatccgactttgaaaatttaaacacagaagaattt
agtagtgaatcagacctggaagaaagcaaagagaagttaaattcatctagctcatctgaa
ggcagcacagttgatattggacttcctgcagaagaacaaccagaagctgaacctgaagaa
gcccaggagccagaggcctgcttcacagaaggctgtgtaagaaggttcaagtgctgtcaa
gtaagtatagaagaagggagaggaaagcagtggtggaaccttagaaaaacctgcttcagg
attgttgaacacaattggtttgagactttcattgtctttatgattctcctcagtagtgga
gctctggcttttgaagacatatatattgaacaacgtaaaactatcaagaccatgctggaa
tatgctgacaaggtcttcacttacatcttcattctggaaatgctgctgaagtgggtggcc
tatggctaccaaacatattttactaatgcctggtgctggctggacttcctgattgtcgat
gtctctttggttagcttaacagcaaatgcattgggttactctgaacttggtgccattaag
tcccttaggacactaagagctttgagacctctaagagctttgtcacgatttgaaggcatg
agggtggttgtgaatgcccttttaggagcaattccatccatcatgaacgtgcttctcgtt
tgtcttatattctggctaattttcagcatcatgggagtaaatctgtttgctgggaagttc
tactactgtgttaacaccacaactgatgaaaggtttgaagtcgaccaaatcaacaatttt
agtcagtgcgaggaactcataaaaaacaatcaaagtgcccgatggaaaaacgtgaaagta
aactttgataatgtaggatttgggtatctttctttacttcaagtagctacatttaaaggc
tggatggatattatgtatgcagctattgactcaagagatgtgttagagcaacccaagtat
gaagacaacttgtatatgtatttgtattttgtcatctttataattttcgggtcttttttc
accctgaatttgttcattggtgtcattattgacaacttcaatcagcaaaaaaagaagttt
ggaggtcaagacatatttatgacagaagagcagaagaaatactacaatgcaatgaaaaag
ctgggatccaaaaaaccacaaaaacctataccaagaccagggaataaattccaaggaatg
gtctttgattttgtaacacagcaagtatttgacatcagcatcatgattcttatttgtctt
aatatggttaccatgatggtagaaactgatgaccagagcaaagaaatggaaaatatttta
tactggataaacctcgtgttcattgtccttttcactggagaatgtgttctgaaattaatt
tcacttcgccattactacttcactataggctggaatatttttgattttgtggttgtcatt
ctgtctatagtaggaatgtttttggctgagatgattgagaagtactttgtatctcccaca
ctattcagagtcatccggcttgccagaattggtcgaatcctgcgcctcattaaaggcgct
aagggaatccgcactctgctgtttgctttgatgatgtctcttcctgctttgttcaacatt
gggctgctgctcttcctggtcatgttcatctatgcgatatttggcatgtccaactttgcc
tatgtcaagagggaagctgggattgatgacatgttcaactttgaaacgtttggcaacagc
atgatctgcctgtttcagatcaccacgtccgctggctgggacggtttgctcgccccaatt
ctcaacagtggggagccagactgtgaccctaacaaggctcatccggggagctctgtgaaa
ggtgactgtggcaacccttctgttgggattttcttctttgtcagctacattatcatatcc
ttcctggtagtggtgaacatgtacattgctgtgattttggagaactttggtgttgctact
gaagaaagcgctgaacccttgagtgaggatgactttgagatgttctatgaagtctgggag
aagtttgatcccgatgcaacacaattcatggaatttgagaaattgtctgattttgcagca
gcacttgagcctcctcttcatctacccaaacctaacaaagtccagcttattgcaatggat
ctgcccatggtgagtggtgacagaattcactgccttgacatcttgtttgctttcacaaag
cgtgttttgggggaaagtggggagatggacgccctcagaatacagatggaagatcggttt
atggcatccaatccttctaaagcttcctatgaaccaattacaaccacactgaaacgaaag
caggaagaggtgtctgctgtcatcattcagcgtgcttacagacgtcaccttttaaaacga
acagtaaaacaagcttcctttatctataacaaaaataaaactgaaggtggggctgggcag
ggtatgaaagatgaaatccttattgacaagttaaatgaaaactcattcacggagaaaaca
gatataacggcatcaacagcagtttgtccgccttcttatgatcatgtaataaggccagtc
aaagaaaagcatgaaaaggaagctaaagatggtcagaaataa
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