Vidua macroura (Pin-tailed whydah): 128809874
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Entry
128809874 CDS
T11570
Symbol
SPOPL
Name
(RefSeq) speckle-type POZ protein-like isoform X1
KO
K10523
speckle-type POZ protein
Organism
vmc Vidua macroura (Pin-tailed whydah)
Pathway
vmc04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
128809874 (SPOPL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vmc04121
]
128809874 (SPOPL)
Ubiquitin system [BR:
vmc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
128809874 (SPOPL)
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Ortholog
Paralog
GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BTB_2
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
128809874
NCBI-ProteinID:
XP_053838256
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Position
7:35186031..35316055
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AA seq
392 aa
AA seq
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MSRVPTPPPPGEMSSGPVAESWCYTQVKVVKFSYMWTINNFSFCREEMGEVLKSSTFSSG
PNDKMKWCLRVNPKGLDDESKDYLSLYLLLVSCPKSEVRAKFKFSLLNAKREETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQSNTNTLK
VPECRLAEDLGNLWETTRFTDCSFYVGGQEFKAHKSVLAARSPVFNAMFEHEMEESKKNR
VEINDVDPEVFKEMMRFIYTGKAPNLEKMADNLLAAADKYALERLKVMCEEALCSNLSVE
NVADILILADLHSAEQLKAQAIDFINRCSVLRQLGCKDGKNWNSNQATDIMETAGWKSMI
HSHPHLVAEAFRALASAQCPQFGIPRKRLKQS
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagggttcccaccccacctcctcctggggagatgtccagtggacctgtggctgaa
agctggtgttacacccaggttaaagtagtaaaattttcatacatgtggaccattaataac
ttcagtttttgccgcgaagaaatgggtgaagttttaaagagttctacattttcatcaggg
ccaaatgacaaaatgaagtggtgcctgagagtgaatccaaagggattagatgatgaaagc
aaagactacttgtcattgtatttgcttttagtcagttgtccaaaaagtgaagtcagagca
aaattcaaattttccttgctgaatgctaaaagagaagaaacaaaagcaatggaaagccaa
agagcatatcgatttgtgcaaggcaaggactgggggtttaaaaaatttatccgaagagat
tttttactagatgaagctaatggtcttctaccagatgacaagcttacattattttgtgag
gtaagcgtggtccaagactcagtaaatatatcaggacagtctaatacaaacactttgaag
gtacctgaatgtcgactagcagaagatttagggaatctctgggaaacaacaagatttaca
gattgcagtttttatgtaggaggacaagaattcaaagctcataaatctgtccttgcagca
cgatctccagtttttaatgcaatgtttgaacatgaaatggaggaaagcaaaaagaatcgt
gtagaaataaatgatgtagaccctgaagtttttaaagaaatgatgagattcatttacaca
ggaaaagcaccaaaccttgaaaaaatggctgacaatttgttggcagctgcagacaaatat
gcactggaacggctgaaggtgatgtgtgaggaagcactctgtagtaacctctcggtagaa
aatgttgctgatattcttatcctcgcagatttgcacagcgctgaacagctaaaagcacaa
gcaatagactttattaacaggtgcagtgttcttagacaacttgggtgtaaagatgggaaa
aactggaatagcaaccaagcaacagacataatggaaactgcaggctggaagtccatgatc
cactcccaccctcacttagtagccgaggcctttcgcgctctggcgtctgcacagtgtcca
cagtttggcattccacgcaaacggctaaaacagtcctga
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