Vidua macroura (Pin-tailed whydah): 128810178
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Entry
128810178 CDS
T11570
Symbol
DES
Name
(RefSeq) desmin
KO
K07610
desmin
Organism
vmc
Vidua macroura (Pin-tailed whydah)
Pathway
vmc04519
Cadherin signaling
vmc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
128810178 (DES)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128810178 (DES)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
vmc04812
]
128810178 (DES)
Cytoskeleton proteins [BR:
vmc04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
128810178 (DES)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Filament_head
CCDC57_N
DUF8429
DUF7491
KIF21A_4th
CCDC192
Ninein_long_CC
COLEC12
DUF1664
CLIP1
CCDC89
Trimer_CC
GAS
FKBP15
Motif
Other DBs
NCBI-GeneID:
128810178
NCBI-ProteinID:
XP_053838790
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Position
7:complement(24916707..24922153)
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AA seq
463 aa
AA seq
DB search
MSQSYSSSQRVSSYRRTFGGSPVFSRASFGGKGSSGSSVTSRVYQVSRTSAVPSLSTFRT
TRVTPLRTYQSAYQGAGELLDFSLADAMNQEFLQTRTNEKVELQELNDRFANYIEKVRFL
EQQNALMVAEVNRLRGKEPTRVAEMYEEELRELRRQIDLLTNQRARVEVERDNLLDDLQK
LKQKLQEEIQLKEEAENNLAAFRADVDAATLARIDLERRIESLQEEIAFLKKVHEEEIRE
LQAQLQEQHIQVEMDISKPDLTAALRDIRAQYESIAAKNIAEAEEWYKSKVSDLTQAANK
NNDALRQAKQEMLEYRHQIQSYTCEIDALKGTNDSLMRQMREMEERFAGEAGGYQDTIAR
LEEEIRHLKDEMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRISIPMHQTFASALN
FRETSPEQRGSEVHTKKTVMIKTIETRDGEVVSEATQQQHEVL
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgagccagtcctactcctccagccagcgggtctcttcctaccgccgcacctttggcggc
tccccggttttctctcgtgcctccttcgggggcaagggcagcagcggcagctccgtcacc
tcccgcgtctaccaggtgtcccgcacctcggccgtccccagcctgtccaccttccgcacc
acccgcgtgacgcccctgcgcacctaccaaagtgcctaccagggtgctggcgagctgctg
gacttcagcctggccgatgccatgaaccaggagttcctccagacccgcaccaacgagaag
gtggagctgcaggaactcaatgaccgtttcgccaactacatcgaaaaggtgcgcttcttg
gagcagcagaatgccctcatggtggccgaggtgaaccgcctgcggggcaaagagcccacc
cgcgtggccgagatgtacgaggaggagctgcgggagctccggcgccagatcgacctgctc
accaaccagagggctcgtgtggaggttgagcgtgacaacctgctcgatgacctacagaag
ctcaagcagaagctgcaagaggagatccagctgaaggaggaggctgagaacaacctcgct
gcattcagagctgatgtggatgcagccacactagcacgcattgacctggaaagacgtatc
gagtccctgcaggaggagatcgccttcctcaagaaggtgcatgaagaggaaatccgggag
ctgcaggcacagctgcaggagcagcacatccaggtggagatggacatctccaagcctgat
ttgacagctgcgctgcgggacatccgtgctcagtacgagagcattgctgccaagaacatc
gccgaggccgaggagtggtacaagtccaaggtgtctgacctgacgcaggcagccaacaag
aacaacgatgcactaaggcaggccaaacaggagatgctggagtaccggcaccagatccag
tcctacacctgcgagattgatgccctcaagggaacgaatgactcgctgatgcggcagatg
cgggagatggaggagcgcttcgcaggggaggccggtgggtaccaggacaccattgcccgc
ctggaggaggagatccggcacctgaaggatgagatggcccggcacctgcgtgaataccag
gacctgctcaatgtcaagatggccctggatgtggagattgccacataccgcaagctgctg
gagggagaggagagccggatcagcatccccatgcaccagaccttcgcttctgcactcaat
ttccgagagaccagcccagagcagcggggctccgaggtgcacaccaaaaagaccgtgatg
atcaaaaccatcgaaacccgtgatggggaggtggtgagcgaggcgactcagcagcagcat
gaagtgctgtag
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