Vidua macroura (Pin-tailed whydah): 128810180
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Entry
128810180 CDS
T11570
Symbol
SNRPD1
Name
(RefSeq) small nuclear ribonucleoprotein Sm D1
KO
K11087
small nuclear ribonucleoprotein D1
Organism
vmc Vidua macroura (Pin-tailed whydah)
Pathway
vmc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128810180 (SNRPD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vmc03041
]
128810180 (SNRPD1)
03032 DNA replication proteins [BR:
vmc03032
]
128810180 (SNRPD1)
Spliceosome [BR:
vmc03041
]
Complex A
U1 snRNP components
Sm proteins
128810180 (SNRPD1)
U2 snRNP components
128810180 (SNRPD1)
Complex B
U1 snRNP components
128810180 (SNRPD1)
U4/U6.U5 tri-snRNP components
128810180 (SNRPD1)
Complex C
U2 snRNP components
128810180 (SNRPD1)
DNA replication proteins [BR:
vmc03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
128810180 (SNRPD1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
EBNA2_Core
YomU_Tube
Gemin7
Hfq
AAA_RNF213_3
Phage_Hfq
SM-ATX
API5
Motif
Other DBs
NCBI-GeneID:
128810180
NCBI-ProteinID:
XP_053838802
LinkDB
All DBs
Position
1:45945697..45951467
Genome browser
AA seq
119 aa
AA seq
DB search
MKLVRFLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPVQLETLSI
RGNNIRYFILPDSLPLDTLLVDVEPKVKSKKREAVAGRGRGRGRGRGRGRGRGRGGPRR
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgtcaggtttctaatgaagctgagccatgagactgtgaccattgagctgaag
aatgggacgcaggtgcatggaacgatcacaggagtggatgtcagtatgaacacacatctc
aaagcagtgaaaatgacactgaagaacagagagcccgtacagctggagacactgagtatt
cgagggaacaacattcgctacttcattctgccggacagtttgcctctggatactttgcta
gtggatgttgaaccaaaagtcaaatccaagaaaagagaagcagttgctggaagaggccgt
ggaagaggccgtggcagaggccgaggtcgtggaagaggaagaggaggcccaagacgataa
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