Vidua macroura (Pin-tailed whydah): 128810458
Help
Entry
128810458 CDS
T11570
Symbol
MMS19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
vmc Vidua macroura (Pin-tailed whydah)
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vmc03036
]
128810458 (MMS19)
03400 DNA repair and recombination proteins [BR:
vmc03400
]
128810458 (MMS19)
Chromosome and associated proteins [BR:
vmc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
128810458 (MMS19)
DNA repair and recombination proteins [BR:
vmc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
128810458 (MMS19)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
TOR1L1_N
HEAT_GCN1
HEAT_ECM29
TPR_CAND1
RIX1
Motif
Other DBs
NCBI-GeneID:
128810458
NCBI-ProteinID:
XP_053839265
LinkDB
All DBs
Position
8:complement(14169117..14184322)
Genome browser
AA seq
1026 aa
AA seq
DB search
MAAAGAGAGAEAQALTASVRDFVSGQQDGRAAEVAAGVKDGRWTVLQLVEALGFCLENTD
PRMRGRGIQLLSQVLLQCYSLLQEKEVLHLVLFYESRLQDNHLVIPSVLQGLRALSMCEV
LPPGLAVSVLKAIFQEVHVQSLLQLDRHTVYSIITNFMSTREEELKGLGANFTFGFIQVM
DGEKDPRNLLVAFQIVHDLIAKDYALGPFVEELFEVTSCYFPVDFTPPPNDPHGIQREDL
ILSLRAILASTTQFAEFLLPLLIEKLDSELQSAKLDSLQTLTACCAIYGQKELQEFLPSL
WSSLRREVFQTASEKIETECLAALRALSACLSRSVLSSDSEDLLDSFLSSILQDCRHHLC
EPDMKLVWPSAKLLQAAAGASLRTYHCITHSVLPLLLEQYTKHTQSSQRRTILEMLLGFL
ELQQKWGNVEEDESTLLSLQAPVCSVVFSALLDPSVQLQLVGIKALTVLGSLQGFLSSSN
LELVVDHLIRLALHEEDSQSSEAAMKAAGSLAPTYPKVFSGHMVPRLEKELQSEWEESNH
NHHSLQQRCLQALAAVSTHTSIVRETVPILLQHLQKVQKGTEARNTQDMISVCQNLHRVA
LQCQQDAEGCWYFHQTVVPCLLAMAVQAAMPESTHTLPGKALLEEEVLAAMIPVISAATT
HLSSELAAQSVSHVVPLFLDGDVSFLPQNSFPCSFQPFRDGECLEAQRRLVALLMAFVCS
LPRDVAIPQQEWLLRELLALSCSCNCPFTATTAAKCFAGLVNKHPAGQQLDEILQLAVNR
MEPSLAEGPRRTQALTLLLWVTKALVLRYHPMSSCLTDKLLGLLDDTELGTATADGFSLL
MAESPDVLHKGCHADVRIMFRQRFFTDNVPKLVRGFHGAGPDVKANYLKGLSHVLNHLPK
PVLVTELPTLLSLLLEALSCSDRVVQLSTLNCLHPLLLEAPQIMSLHVDTLVTKFLNLTS
SPTMAVRIAALRCAHALTSLPTTVLLPYKGRVIRALAKPLDDKKRLVRKEAVAARGEWFL
LGSPGR
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccggggccggggccggggcggaggctcaggctctcaccgcctccgtccgg
gacttcgtgtccgggcagcaggacggccgtgccgcggaggtggcggcaggggtgaaagat
ggaagatggacagtgctgcagcttgtggaagccctggggttttgcctggagaacacagat
cctcggatgcgagggcgaggcatccagctgttgtcacaagtcctgctccagtgttactcc
ctgctccaggagaaggaagtgctgcatctggtcctgttctatgaaagccggttgcaagat
aatcacctggtgattccctcggtgctccagggactccgggcattgagcatgtgtgaggtg
ctgcccccagggctagcagtgtctgtgctcaaagccatcttccaggaggtgcatgtgcag
tccttgctacagctggaccgccacacagtctacagcatcatcaccaacttcatgagcacc
agggaggaagagctgaaaggcctgggtgccaacttcaccttcggcttcatccaagtcatg
gatggggagaaggatccccgcaatctgcttgtggccttccagattgtgcatgatctcatt
gccaaggactatgccctgggtccctttgtggaggagctgtttgaagttacctcctgctac
ttccctgttgattttactccaccccccaatgatcctcatggcatccagagggaagacctg
atcctgagcctccgggccatactggcttccacaacccaatttgctgagttccttctccct
ctgcttattgagaagttggactcagaactgcaaagtgccaagcttgactcgctgcagact
ctgactgcctgctgtgccatctatgggcagaaggagctgcaggaattccttcccagcctc
tggtcatccctgcgcagagaggtgttccagacagcgagcgagaagattgagacggaatgc
ctggctgcactgcgtgctctctctgcctgcctctcccgctctgtgctcagctctgattct
gaggatctgctggattccttcctcagcagcatcctgcaagattgcaggcaccatctgtgc
gagcccgacatgaagctggtgtggcccagtgccaaactcttgcaggcagcagcgggtgcc
tccctccgcacctaccactgcatcacccacagcgtcctgcccctgctgctggagcagtac
accaagcacacgcagagcagccagaggaggacaatcctggaaatgctgctaggcttcctg
gagttgcagcagaagtggggaaatgtggaagaagatgagagcactctgctgtcgctccaa
gccccggtttgctctgtggtgttctcagcgctgctggatcccagtgtgcagctgcagctg
gttgggatcaaagcactgactgtcctgggctccctgcaaggcttcctgtcttcctctaat
ctggagctggttgtggatcacctcatccgtcttgctctgcatgaggaggattcccagagc
agtgaagcagcgatgaaggcagctgggtccctggcccccacctacccaaaggttttctct
ggacacatggtacccaggcttgaaaaggagctgcagtcagagtgggaggagagcaaccac
aaccaccactccttgcagcagcgctgcctgcaggccctggcagctgtgtccacccacacc
agcatcgtgagggagactgtccccatcctgctacagcatctccagaaggtgcagaaaggg
actgaggccaggaacacccaagacatgatctctgtgtgccagaacctgcaccgcgtggcc
ctgcagtgccagcaggatgccgagggctgctggtacttccaccagacagtggtgccatgc
ctgctggccatggctgtgcaggcagccatgccagagagcacccatacactgccaggcaag
gcactgctggaggaagaggtgctggctgccatgatcccagtcatcagtgctgccaccact
cacctgagctctgagctggctgcccagagtgtgtctcatgtggtgcccctctttctggat
ggagacgtctccttcctaccccaaaacagttttccctgctccttccagcctttccgggat
ggggagtgcttggaggcacagagacgcctggtcgccctcctcatggccttcgtctgctcc
ttgccccgcgatgtggcaatccctcagcaggaatggctgctccgggagctgctggcattg
agctgttcctgcaactgtcccttcacggccaccacagctgccaagtgctttgcagggctg
gtgaacaagcacccagcagggcagcagctggatgaaatcctgcagcttgcagtgaacagg
atggaacccagccttgcggaggggccccgccgaacacaggcactcaccctgctgctctgg
gtgaccaaagccctggtgctgcgctaccaccccatgagctcttgcctgacagacaagctg
ctgggcctgctggatgacacggagctgggcactgccacagctgatggcttctccttgctc
atggccgagtccccggacgtgctgcacaagggctgccatgctgacgtgcgcatcatgttc
cgccagcgcttcttcactgacaatgtccccaagctggtgcgaggcttccatggggctggc
cccgatgtgaaggccaattacctgaagggcctgtcccatgtgctcaaccacctccccaaa
cctgtgctggtgacagagctgcccacacttctttccctcctgcttgaggccttgtcctgc
tcggatcgtgtagtgcagctctccacactgaactgcctccacccactgctgcttgaagct
ccccagatcatgagcctgcatgtcgacacactggtcaccaagttcctcaacctcacctcc
agccccaccatggccgtccgcatcgctgccctgcgctgtgcccatgcccttaccagtctg
cccacaacagtgctgctcccatacaagggccgagttatccgggcactggccaagcctttg
gatgacaaaaagaggctggtgcggaaggaagcagtggcagcacgtggggaatggttcctg
ctcgggagcccaggcaggtga
DBGET
integrated database retrieval system
