Vidua macroura (Pin-tailed whydah): 128810545
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Entry
128810545 CDS
T11570
Symbol
JMJD1C
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
vmc Vidua macroura (Pin-tailed whydah)
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vmc03036
]
128810545 (JMJD1C)
Chromosome and associated proteins [BR:
vmc03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
128810545 (JMJD1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_KDM3B
PWWP_KDM3B
DUF7030
JmjC
C1_2
zf-C5HC2
FYVE
Motif
Other DBs
NCBI-GeneID:
128810545
NCBI-ProteinID:
XP_053839474
LinkDB
All DBs
Position
8:complement(30173478..30334945)
Genome browser
AA seq
2522 aa
AA seq
DB search
MAVETRPELVGKRFLCLGGEEPPESGRWRAGVIRAVSQRDSHSPDLAVYVEFDDLEWEKR
EWVKVYEDFAAFLVEYQLVWAKRKDPSQTQGSKIKQIQWPALTFKPLVGKSVYNSITAVE
FLVDKQLDFITEDSAFQPYQDDVDSLNPVLRDNPQLHEEVKAWVKEQKVQEIFMQGPYSL
NGYRVRVYRQDSATQWFTGIITHHDLFTRTMVVMNDQVLEPQNVDPSMVQMTFLDDVVHS
LLKGENIGITSRRRSRSNQNSNTVHGHYTRAQANSPRPAMNSQAAAPRQNSHQQQRNSRP
NKRKGSDSSMPDEEKMKDERYDYIGRGENPKTKNKHFLSKRRKPEEDEKKLNVKRLRTDN
ISDYSESSDSEISNKRLTDSSSEQNSENELKSKNSSKINGEEGKSQTTEGVEQTLTDRQS
PWDEVQQDKNHEETERLKSSVLDHQEKSSLHAAEQPTLYEQNAKDPPVQECNAEKHHTVE
LKNEQFLPRPPTPKCVVDVTNKNNSEKENQDNAASTFGLQTVQKIESHSSDLKQQFANAN
FLEARKQEADQSWVSNVGKTDSIQPGVVKTLPVNEHLNSEKVQYGSFMSSLNVASVAEES
KLRKQSPVPDSVKSKSSASVDHPKTKSPDVKPKFTQSSDTVKSKVSSQNSHATGLTRSAN
KTDHDLPRSSFHPVPARVSALEATKSPLIIDKNEHFTVYRDPSLIGQETGTNHISPYLHQ
HNYPLHSSSHRTCLNPNAHHPALTGSSHLLAGSSAQAPLSAINTHPLSSTSHHSVHHPHL
LPAVLPGVPAASLLGAHPRLETAHASSLSHLALAHQQQQQMLQHQSPHLLGQAHPSASYN
QLGLYPIIWQYPNGTHAYSGLGLPSSKWVHPETPVNAEPSLRRNTPSPWLHQPTPVTSAD
SLGLRSHIPVRPSSADPLRPLKLTAHSSPPLSKTIVEHRKEELERKAFAEPLRSVTTAPV
KSELEQSRTQTAKESHMHRHYADPMLNQLPRPPQETGERLSKYKEEHRRILQESIEVAPF
TAKIKALEGERENYSRVTSLSSSPKSHSVKYDKDAERSVSELYKMKHSVPQNLPQSNYFT
TLSNSVVNEPPRSYPSKEASGVYVDKQTNCPSTAASPQALPSYISSLSKPPPLIKHQPES
EGSTSKIPEQLSQSVQSHSVNSFRSDSRSPTQLSVSSSNTLRSMPALHRAPVFHPPVHQN
LEKKESSYSSLSPPTLTPVQPVNAGGGKTQELQKPPTLVPEPKEAQTVYKGTSEQNLSEM
WKSSNAPNNEKVDWHTERMSGKSQSATASVIVRPPSSTKYENVPVMQSASKDRVSERSSA
VTNLADCLKTAEARETGRVILPNTNSDSARTQYEKKFAAVLQGSIPHAVTPTTTIICSTK
TDVTASAAMTTSASSRGSSEVTYSVSSTVSCAPPESAAPRTAGQAAAQPQECKVSTAAPV
TSAAGSAAQPSSGFSTSTDFVHLKKHKAALAAAQFKSSNAAETESNSVKNQTFSTSLSLD
SAIVCNTINKANSVGSGQTSQTSQPNYHTKLKKAWLTRHSEEDKNTNKKDNSGNSVSEII
KPCTVNLIASTSNDLQNNIDSKILADKFVKEDKHPRRKGKRTYESGSESGDSDESESKSE
QRTKRQPKPTYKKKQNDLQKKKGDTEEEVKPNGVLSRSAKEKSKLKLQSGSNSTGIPRSV
LKDWRKVKKLKQTGESFLQDDSCSEIGPNLQKCRECRLIRSKKGEEPTHSPVFCRFYYFR
RLSFSKNGVVRIDGFSSPDQYDDEALSLWTHENYEDDELDLETSKYILDIIGDKFCQLVT
SEKTAMSWVKKDAKIAWKRAVRGVREMCDACEATLFNIHWVCQKCGFVVCLDCYKAKERK
SSRDKELYAWMKCVKGQPHDHKHLMPTQIIPGSVLTDLLDAMHSIREKFEIKSHCQCTTK
QNTQAGKLPAMNGVSQVLQNVLNHSNKISLCMPESQQQNTPQKSETNGNTSPRSDVSTDS
KLTPPESQSPLHWLADLAEQKAREEKKENKECPSGKHSKEGKDQDNLESPNCKSSPPASQ
NNEQGSTLRDLLTTTAGKLRLGSTDAGIAFAPVYSTGTASGKSGRTMPNILDDIIASVVE
NKIPPNRAPKINVKSETKEEPKDDKKSIQDDCSKRYSDIQYSWICDKHVLWLRDHKNTNN
WKLFKECWKQGRPVLVSGMHKKMNFSLWKAESISLDFGNQQADILNCKDSIISNTNVKEF
WDGFEDVSKRQKVKNGETALLKLKDWPSGEDFKAMMPARYEDLLKSLPLPEYCSPEGKLN
LASHLPGFFVRPDLGPRLCSAYGVAATKDHDIGTTNLHIEVSDVVNILVYVGIAKGNGVL
SKSGVLKKLEEEDLDDLLRKRLKDSSELPGALWHIYAGKDADKIREFLQKIAKEQGLEVL
PEHDPIRDQSWYVNKKLRQRLFEEYGVKTCTVIQFLGDAIILPAGALHQVQNFHSCVQVT
EDFVSPEHLVQSFHLTQELRLSKEEINYDDKLQVKNILYHAVKEMVRALKIHEGEMEDMD
EN
NT seq
7569 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggagacgcggccggagctggtggggaagcggttcctgtgcctcggcggcgag
gaaccgccggagagcgggcgctggcgggctggggtcatccgcgccgtatcccagcgggac
tcacacagccccgacctggcggtatatgtggaatttgatgaccttgaatgggaaaagcga
gaatgggttaaagtttatgaagattttgcagccttcttggtggagtaccagctggtctgg
gcaaaaagaaaggacccaagccagactcagggatcaaagatcaaacaaattcaatggcct
gcattgacgttcaagcccttggttggaaaaagtgtatacaattcaattactgcagtagaa
ttccttgtggacaaacagctggatttcataactgaagatagtgcctttcagccctatcag
gacgacgtagacagtctaaacccagttctcagggataacccgcagttacatgaggaggta
aaagcctgggtaaaggaacaaaaggttcaggagatttttatgcaaggtccgtactcctta
aatggttatagggtgagagtgtacagacaggattctgccacccagtggttcactggcatc
atcactcaccatgatctcttcacccgcactatggtggttatgaatgaccaggtgctagaa
cctcagaatgttgatccttctatggttcagatgacctttctagatgatgttgttcactct
ttgttgaaaggtgaaaatattggcatcacttcacgccgacggtctcgttccaaccagaac
agcaacacagttcacggtcattatacacgtgcacaagcaaatagtcccagaccagcaatg
aattcccaagctgcagcaccaagacagaattctcatcagcaacagaggaattctcggcca
aataagaggaaaggctctgacagcagcatgcctgatgaagagaagatgaaagatgaaaga
tacgattatataggtcgaggagaaaaccccaaaaccaaaaataaacactttcttagtaaa
agaagaaaacctgaagaagatgaaaaaaaactaaatgtgaagaggctgcggacggacaac
atctcagattattctgagagcagtgactcggagatttcaaataagagattaacagattca
tcctcagagcagaattcagaaaatgagttaaaaagcaagaactcttcaaagataaatgga
gaagaaggaaaatcacaaactactgagggcgtagaacaaacactaacagataggcagtct
ccatgggatgaagtacagcaggataaaaaccatgaagagacagaaagactgaagtcatca
gtcttggatcatcaggaaaaatcttcactccatgcagcagagcagccaacactttatgag
cagaatgccaaggatccacctgttcaagagtgtaatgcagaaaaacatcacactgtggag
ttaaaaaatgagcagtttttacccagacctcctactcctaagtgtgttgttgatgttact
aataaaaacaactctgaaaaggagaaccaggataatgctgcaagtacctttggtttgcaa
acagttcagaaaatagaatctcacagcagtgatttaaaacagcaatttgcaaatgcaaat
ttccttgaagcaagaaaacaggaagctgatcaaagttgggttagcaatgttggtaaaacg
gattcgatacaacctggggttgtaaaaacattaccagtaaatgaacacttaaattctgaa
aaagtgcagtatggctcatttatgtcttcgttaaatgtagcttctgtagcagaagagagt
aaactgcgtaaacaaagtccagtccccgattctgtgaagtcaaaatctagtgcttcagtt
gatcatcctaaaacaaagtcacctgatgttaagcctaaattcacccaatcttctgatact
gtgaagtcgaaggttagttcccaaaacagccatgctactggattaacaaggtcagccaat
aaaactgatcatgatttgcctaggtctagttttcatccagttccagccagagttagtgct
ctagaagctactaagagtcctcttatcattgacaagaatgaacatttcacagtatacagg
gaccccagtctgattggacaagaaacaggaactaatcacatttcaccttacttgcatcag
cataattatcctctgcattcctcatcccaccgaacctgtttaaatccaaatgcacatcat
cctgcattaactggttcatcccatctgctcgctgggtcttcagctcaggctcccttgtcc
gctattaacactcacccccttagtagcacatctcaccattctgttcatcaccctcatcta
cttcccgcagtgttgcctggagtgcctgctgcctccttgctgggtgcccacccgcgacta
gagactgctcatgctagcagcttaagccatttggcattagcacaccagcagcagcaacag
atgttacaacaccagtctccacatcttctcggacaagctcatccttctgcttcctataat
cagctagggctttatccaattatttggcagtatccaaatggaacacatgcttactcagga
ctcggtctgccctcctccaaatgggtccacccagaaactcctgttaatgcggagccttcc
ttgagaaggaatactcccagcccctggttacaccagcccaccccagtgacctcagctgac
agccttggtttacggagtcacattccggtgcgaccgtccagtgcagatccccttcggcct
ctcaaactgacagcgcattccagcccgcccttgtccaaaactattgtagagcatcgcaaa
gaagaactggagaggaaagcttttgctgaacctttgcgttctgttaccactgcgccagtg
aagagtgagctagagcagagcagaacgcagacagcaaaggagagccatatgcacagacat
tatgcagatccaatgttgaaccagctgccaaggccaccacaggagactggggagcgactg
agcaaatacaaagaagaacacagacggatactccaagaaagtattgaagttgctcctttt
acagctaaaataaaggcactggagggagagagagaaaactactccagggtaacatcctta
tcttcaagtcccaaaagccattcagtaaaatacgacaaagatgctgaacgctctgtgtca
gaactgtataaaatgaaacattcagttccacagaatttgccacagagtaactatttcact
accttgtctaacagtgtagtaaatgagccaccaagatcgtacccatcaaaggaagcttca
ggtgtatatgttgataagcaaactaattgtccttcaacagcagctagtccccaggctctc
ccctcctacatttcttccctttcaaaaccaccacctttaattaagcaccaaccagaaagc
gaaggctctacaagcaagatacccgagcagctttcacagtcagtgcagtctcactctgta
aattctttcagaagtgacagcaggagccctactcagttgtcagtctcatcttcaaataca
ctccggagtatgcctgccttgcatagggcccctgtgtttcaccctcctgtgcaccagaac
ctggagaagaaggagagcagctacagcagcctttcacctccaactctaacccctgttcaa
cccgttaatgctggtggtggcaaaacacaggagttgcagaaaccaccaactttagtacct
gagcccaaggaagcccaaactgtttacaagggcacttctgaacagaatttatcagagatg
tggaagtccagtaatgccccaaataatgaaaaagtggattggcacactgaaagaatgagt
ggaaagtcgcagtccgctacagcatctgttattgtgcgtcctccttctagcacaaaatat
gagaatgtaccagtaatgcagtctgcttccaaagatcgagttagtgagagatcttcagct
gtgacaaatctagcagattgcctgaaaacagcggaagccagggagactggaagagtcata
ctgccaaatacgaactcagacagtgctcgcacacagtatgaaaagaaatttgcagctgtc
ttgcaaggcagcattcctcatgctgtcacccctaccacaactatcatctgcagcaccaaa
acggatgtcactgcatcagcagcaatgacgaccagcgcgtcgagccggggcagctctgaa
gtgacttactcggtgtcgagcacggtgtcctgcgcaccgccggagagcgcagccccgaga
acggccggccaggcggcagcgcagccccaggagtgcaaggtcagcactgcagctccggtt
acatccgctgctggcagcgctgctcagcccagctcgggattctccacctctaccgacttc
gtccatttgaaaaagcacaaggcagcgttggctgcagctcagtttaaaagtagcaacgcc
gctgagaccgagtccaactctgtgaaaaatcagacattttcaacctctctctccctagac
agtgctatcgtctgtaatacaataaacaaagcgaactctgtaggcagtgggcaaacttcc
cagacgagtcagccaaactaccacactaaactgaaaaaggcttggctaacaaggcattca
gaggaagataaaaacactaataaaaaagataattcagggaacagtgtttcagaaattatt
aagccgtgtactgtcaatttaatagcttctacatcaaatgatttgcaaaataacatagat
agcaaaatcttggcagataagtttgtaaaggaagataagcacccaaggagaaaaggaaaa
cgaacttatgagtctggctctgaaagtggtgactctgatgaaagtgagagcaagtcagag
caaaggactaagcggcagcccaagccaacttacaaaaagaaacaaaatgatttgcagaaa
aaaaagggtgataccgaggaagaagtgaaaccaaatggtgttcttagcaggagcgccaaa
gaaaaaagcaagctgaagttacagagtggcagtaacagcactggtatacctcgctcagtg
ttaaaagactggcgcaaagtaaagaagctgaagcaaacgggagagtcctttttgcaggat
gattcttgttctgaaataggaccaaatttgcaaaaatgcagagaatgtaggttaataaga
agtaagaaaggagaagaaccaactcactcaccagtattttgtagattttactactttcgg
cggttgtcttttagtaagaatggagtggttaggatagatggtttctcctctcctgatcaa
tatgatgatgaagcactgagtttatggacacatgaaaactatgaagatgatgaactggac
ctagaaacttctaaatacattcttgatatcataggggataaattttgtcaattggtaacc
tctgagaaaacagccatgtcctgggtgaaaaaagacgccaaaattgcatggaagagagca
gtgagaggagtccgtgagatgtgtgatgcatgtgaagccacattatttaacattcattgg
gtctgccaaaaatgtggatttgtggtctgcctagattgttacaaagcaaaggaaaggaaa
agttctagagataaggagttgtacgcctggatgaagtgtgtgaagggacagcctcatgat
cacaagcacctgatgccaacacagattattccaggctctgttttgacagatcttttagat
gctatgcacagtattagagaaaaatttgaaattaaatcccattgtcagtgcaccaccaag
cagaacacacaagctggcaagctccctgcaatgaatggtgtgtctcaggttttgcagaat
gtccttaaccacagtaataaaatttctctgtgtatgcctgagtctcaacagcagaatact
cctcaaaagtctgagacaaatggtaacacaagtccaaggagtgatgtgagcacagacagc
aagttaacaccgcctgaatcccagtccccactgcattggctggctgatcttgcagagcag
aaagccagagaagaaaaaaaagagaacaaagaatgtccctctggaaaacattcaaaggaa
gggaaggaccaggataatttggagtccccaaactgtaaaagttcccctcctgcatcccag
aacaacgagcagggctcaaccttacgagatctcttaactacaacagcaggcaaactgcgt
ctgggctctacagatgctggcattgcttttgctccagtgtactctacaggaacagcaagt
gggaagagtggaaggactatgccaaacattcttgatgatataattgcttcagtagtagaa
aacaagattccaccaaatagagcaccaaagataaatgtaaaatctgaaacaaaagaagag
ccaaaggatgataaaaaaagtattcaggatgactgcagtaaacggtacagtgatatccag
tattcgtggatctgtgataagcatgttctgtggctcagagatcataaaaacaccaacaac
tggaagctcttcaaagagtgctggaaacaaggaaggccagttttggtgtccggtatgcat
aagaaaatgaacttcagcctgtggaaagctgagtcaatcagcctggattttggaaaccag
caagccgatatcttgaattgcaaggacagtataatttcaaacaccaatgtcaaggagttc
tgggatggttttgaagatgtttcgaaacggcagaaagtaaaaaatggagaaacagctctg
ctaaaactgaaggactggccttctggtgaagatttcaaggccatgatgccagcaagatat
gaggacttactaaaaagtttacccttgcctgaatattgtagtccagaaggaaaactaaac
ttggcttctcatctgccaggattttttgtccgtccggatttgggacccaggctatgcagt
gcatatggtgtggctgctactaaagaccatgacataggaaccacaaatctccatattgaa
gtttctgatgtcgtgaacatccttgtttatgttggcatagccaaaggaaatggagtactt
tccaaatcaggagttttgaagaagttggaagaggaagatttggatgaccttttaaggaag
cggttgaaagattcaagtgaattacctggtgctttgtggcacatttatgctggcaaagat
gctgacaagataagagagtttctgcaaaagatagcaaaggagcaaggcctagaagtttta
ccagagcatgatccaatccgtgatcagagttggtatgtgaacaaaaaacttcgccaaaga
ctttttgaagaatatggagtaaaaacctgcacagttattcagttccttggtgatgctatt
attctaccagcaggagcacttcatcaggtgcaaaattttcacagctgcgttcaagtaacg
gaagactttgtgtctccagaacatcttgtacagtcatttcacttaacgcaggagctgagg
ctgtcaaaggaagaaatcaattatgatgataaactgcaggttaaaaatatcttgtatcac
gcagttaaagaaatggtgagagctttgaagattcacgaaggtgaaatggaggatatggat
gagaactga
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integrated database retrieval system
