Vidua macroura (Pin-tailed whydah): 128810995
Help
Entry
128810995 CDS
T11570
Symbol
BTRC
Name
(RefSeq) F-box/WD repeat-containing protein 1A isoform X1
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
vmc Vidua macroura (Pin-tailed whydah)
Pathway
vmc04114
Oocyte meiosis
vmc04120
Ubiquitin mediated proteolysis
vmc04218
Cellular senescence
vmc04310
Wnt signaling pathway
vmc04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128810995 (BTRC)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
128810995 (BTRC)
04340 Hedgehog signaling pathway
128810995 (BTRC)
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
128810995 (BTRC)
04218 Cellular senescence
128810995 (BTRC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vmc04121
]
128810995 (BTRC)
03036 Chromosome and associated proteins [BR:
vmc03036
]
128810995 (BTRC)
Ubiquitin system [BR:
vmc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
128810995 (BTRC)
Chromosome and associated proteins [BR:
vmc03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
128810995 (BTRC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR3_2nd
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
DSE1_N
WD40_MABP1-WDR62_2nd
EIF3I
WD40_Gbeta
WDR55
Beta-TrCP_D
Beta-prop_WDR36-Utp21_2nd
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR41
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
F-box-like
Beta-prop_EIPR1
Beta-prop_RIG_2nd
CFAP251_N
Beta-prop_Aladin
PAC11
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_IP5PC_F
ASA1
Beta-prop_SPT8
TRM82_WD
Beta-prop_DCAF12
NBCH_WD40
Beta-prop_DCAF4
F-box
Beta-prop_VPS8
Beta-prop_IFT140_1st
WD40_like
Beta-prop_NOL10_N
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_WDR11_2nd
Beta-prop_Nup120_160
F-box_5
DUF4508
Aq_678
DUF6188
Motif
Other DBs
NCBI-GeneID:
128810995
NCBI-ProteinID:
XP_053840200
LinkDB
All DBs
Position
8:13395472..13509351
Genome browser
AA seq
628 aa
AA seq
DB search
MDPAEAVLQEKALKFMPRIHMPKDGFQLISSGYQAWLKQCSMPRSLWLGCSSLADSMPSL
RCLYNPGTGALPAFQNSSEREDCNNDEPPRKIIPEKNSLRQTYNSCARLCLNQETVCLGS
TAMKTENCVAKTKLANGTSSMIVPKQRKLSASYEKEKELCVKYFEQWSESDQVEFVEHLI
SQMCHYQHGHINSYLKPMLQRDFITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYR
VTSDGMLWKKLIERMVRTDSLWRGLSERRGWGQYLFKNKPPDGTAPPNSFYRALYPKIIQ
DIETIESNWRCGRHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKR
ILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNGMMV
TCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCE
FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK
RIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTI
LIWDFLNDPAAQAESTRSPSRTYTYISR
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggacccggccgaggccgtcctgcaggaaaaggcgctcaagttcatgccccgaatacac
atgccaaaagatggatttcaacttatatcttctggataccaagcatggctaaagcagtgc
tctatgcccagatctctgtggctgggctgctccagcctggcggacagcatgccctcgctg
cgatgcctgtataacccagggactggcgcactcccagctttccagaattcctctgagaga
gaagactgtaataatgatgagccccctaggaagatcattcctgagaagaattcacttaga
cagacctacaacagctgtgccagactgtgcttaaaccaggaaacagtatgtctgggaagc
actgctatgaagactgaaaattgtgtggccaaaacaaaacttgccaatggcacttccagt
atgattgtgcccaagcaaagaaaactgtctgcgagctatgagaaggagaaggagctctgc
gtcaagtacttcgaacaatggtccgagtctgaccaggtggagtttgtggagcacctcatc
tcccagatgtgtcactaccagcacggacacataaactcatacctcaaacccatgttacag
agggacttcatcactgcactgccagctcggggattggatcacattgctgagaacattctg
tcatacctggatgccaaatctttgtgtgctgctgagctggtgtgcaaggagtggtaccgg
gtgacgtcagatgggatgctgtggaagaagcttattgagagaatggtcaggacagactcc
ctgtggaggggtttgtcagagaggagaggatgggggcaatatctatttaaaaataaacct
cctgatggaactgcaccacccaactccttctacagagcactttaccccaaaattatacaa
gacatagagacaatagagtcgaactggcggtgtggaaggcacagtttacagaggatccac
tgccgaagtgagacaagcaaaggggtttattgtttacagtatgatgatcagaagatagta
agcggcctacgagacaatactattaagatctgggataagaatacattggaatgcaagcga
attctcaccggacacacgggttctgtcctgtgcctccagtatgatgaacgagtgatcatt
actggatcttcagactcaacagtcagagtgtgggacgtgaatgcaggcgagatgctgaat
accctgatccaccactgcgaggccgtgctgcacctccgcttcaacaacggcatgatggtg
acgtgttccaaggaccgctccatcgccgtgtgggacatggcctccccaacagacatcacc
ctgaggagggtgctcgtagggcaccgagctgccgtcaacgtagtggactttgatgacaag
tacattgtatcggcatcaggtgacagaactataaaggtatggaacactagtacctgcgaa
tttgtgcgcaccttaaatggccacaaacgaggcattgcatgtctgcagtacagagacagg
ctagtagtgagcggctcttctgataataccatcaggctgtgggatattgagtgtggggca
tgtttacgagtactggaaggccatgaagagttggtgagatgcatacgctttgataacaag
aggatagtcagtggggcatatgatgggaaaattaaagtttgggatcttgtggctgctttg
gatccccgtgctccagcagggaccctctgcttgcgaacccttgtggagcattctggaaga
gtctttcgacttcagtttgatgagttccagattgtcagcagctcacatgatgacaccatc
ctcatctgggattttctgaatgacccagctgcccaggcagaatccactcgttccccgtcc
agaacatacacctacatctccagataa
DBGET
integrated database retrieval system
