Vidua macroura (Pin-tailed whydah): 128811223
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Entry
128811223 CDS
T11570
Symbol
LAMC1
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
vmc Vidua macroura (Pin-tailed whydah)
Pathway
vmc04510
Focal adhesion
vmc04512
ECM-receptor interaction
vmc04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128811223 (LAMC1)
04518 Integrin signaling
128811223 (LAMC1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128811223 (LAMC1)
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Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
Laminin_B
Syntaxin_2
Motif
Other DBs
NCBI-GeneID:
128811223
NCBI-ProteinID:
XP_053840626
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All DBs
Position
9:complement(8868379..8935504)
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AA seq
1601 aa
AA seq
DB search
MGGGGGERWALWLWVLWLWVPARCGGAMDECAEERSGRAQRCMPEFVNAAFNATVLATHT
CGTPAEEYCVQTGVTGVTQSCHLCDAAQPHLSHGAAFLTDYNSPADATWWQSRTMLAGVQ
HPTAVNLTLHLGKAFDITYVRLKFHTSRPESFAIYKRTKEDGPWVPYQYYSGSCESTYHK
INRGFIRTGEDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQEWVTATD
IRVTLNRLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKNELGKLVCNCK
HNTFGVDCEKCLPFFNDRPWRRATAESANECLPCDCNGRSQECYFDPELYRATGHGGHCT
ACAGNTDGPRCERCRDSFYRLASDEGCLPCSCNPVGSLSTQCDSYGQCSCKPGVMGDKCD
RCQPGFHSLSEAGCRPCSCNAAGSTGECNVETGRCACKDNVEGFHCERCKPGFFHLDSSN
PRGCTPCFCFGHSSVCTSAVGYSIYSITSNFEFGEDEWRAEQRDGSEVLLQWSAETQDIS
VISDTYFPIYFVAPRKFLGNQVLSYGQNLTFSFRVDRRDTRLSAEDLVLEGAGLRVSVPL
IAQGNSYPSENVQTYTFRLHEAADYPWRPALTAFEFQKLLHNLTSIKIRGTYSERSAGHL
DDVTITSARPGAGVPVAWVESCSCPVGYEGQFCERCTAGYRRETPSLGPYSPCVPCTCNG
HSETCDPETGACNCRDNTAGTHCEKCSDGYYGDATAGTASDCQPCPCPGTSSCAIVPRTK
EVVCTSCQAGTTGKRCELCDDAYFGDPLGRNGAVRPCRLCQCNNNIDPNAVGNCDRQTGE
CLKCIYNTAGFYCDRCKDGFFGNPLAPDPADKCRACHCNPYGTVNQQTICNQVTGQCECL
SHVTGRDCSACEPGFFNLQSGRGCERCNCHALGSTSGQCDIRTGQCECQPGVTGQHCDRC
EGNHFGFGSEGCKPCDCDPEGSRSLQCRENGHCECKEGFVGSRCNQCEENYFYNRSWPGC
QECPACYRLVKDKVAEQRQRLQELENLIANLGTREETVTDEAFEERLKQAEREVTELLHE
AQKSKDVDQGLMDRLKDINSTLVSQLNRLRNIQGTVQDTENLAEQARVRVEDTEDLISMA
SDMLERARMAADNVSITPPEQSGDPNNMTLLAEEARKLAERHKKEADEIVRTAKAANDTS
TEAYQLLLKTLAGENQTAIDIDELNQKYNQARNISRDLEKQANKVLAEAEEAGNRALQIY
ANLTSLPTVDSTGLENKANKIKKEAEELDQLIARKLKDYEDLREDMKGKELEVKNLLEKG
KTEQQTADQLLARADAAKALAEEAARKSSGTLQEANTILRNLKDFDRRVNDNKTAAEEAL
KKIPAISRTIAEANNKTHQAELALGNAAADAREAKARADDAEKIASSVQKSAAATRAEAD
KTFADVTGLAREVDDMMKQLQDAEKELKRKQADAEQDMKMANEASQAAQEAEDNARKAKN
SVNSLLTVINDLLDQLGQLETVDLNKLNEIEGTLNSAKDQMKDSDLDQKVSFLEREAKKQ
DDAIQAYNRDIEEILKDISNLEDIRKTLPSGCFNTPSIEKP
NT seq
4806 nt
NT seq
+upstream
nt +downstream
nt
atggggggcggtggcggcgagcgctgggcgctgtggctgtgggtgctgtggctgtgggtg
cccgcgcggtgcggcggtgccatggacgagtgcgccgaggagcggagcgggcgggcgcag
cgctgcatgcccgagttcgtgaacgcggcgttcaacgctacggtgctggccacgcacacg
tgcgggacgccggcggaggagtactgcgtgcagaccggggtcaccggcgtcacccagtcc
tgccacctctgcgacgccgcccagccgcacctgagccatggcgccgccttcctcaccgac
tacaacagtccggccgacgcgacctggtggcagagccgcaccatgctggccggcgtgcag
caccccaccgccgtcaacctcaccctgcacctgggaaaagcctttgacatcacgtacgtg
cgcctcaagttccacacgagccggcccgagagctttgccatctacaagcgcacgaaggag
gacggcccgtgggtgccctaccagtactacagcgggtcctgtgagagcacctaccacaaa
atcaaccgtggcttcatccgcaccggggaggacgagcagcaggcgctctgcaccgatgag
ttcagcgacatctcccctctcaccggaggcaatgtggccttctcaacgctcgaggggcgt
cccagtgcctacaacttcgacaacagccctgtgctgcaggaatgggtgacagctacagat
attagagtgaccctcaaccgtctgaacacatttggagatgaagttttcaatgacccaaaa
gttctcaagtcttactactatgcaatttctgattttgctgtgggtggtaggtgcaaatgc
aacgggcacgcgagtgagtgtgtgaagaatgagcttgggaagctggtctgcaactgcaag
cacaacaccttcggggtggactgtgaaaagtgccttcctttcttcaacgaccgcccgtgg
aggagagcgaccgcggagagcgccaacgagtgcctgccgtgcgactgcaacgggcggtcc
caggagtgctactttgaccccgagctgtaccgcgccacgggccacggcggccactgcact
gcctgtgccggcaacaccgacgggccccgctgcgagcgctgccgcgacagcttctaccgc
ctggccagcgacgagggctgtctgccctgcagctgcaacccagtcggctccctcagcaca
cagtgtgacagctacggccagtgcagctgcaagcccggtgtgatgggggacaagtgtgac
cggtgccagccagggttccactccctctccgaagctgggtgcaggccctgttcttgcaat
gctgctggcagcacaggggagtgcaacgttgagacagggcggtgtgcgtgcaaggacaat
gtggaaggattccactgtgagagatgcaaacctggatttttccatctggactcctccaat
ccaagaggctgtactccctgcttctgttttggacactcttcagtctgcaccagtgctgtg
ggctacagtatctatagcatcacctccaactttgagtttggagaggatgagtggcgtgct
gagcagcgtgatggctcagaagtcttgctgcagtggagtgccgagacccaggatatctct
gttatctcagacacctacttccccatatacttcgttgcaccacgcaagttcttgggcaac
caggttttgagttacgggcaaaacctgaccttctccttccgtgtggacaggcgggacacg
cgcctctctgcagaggacctggtgctggagggggctgggctgagagtgtcggtgcctctc
attgcccagggcaactcctaccccagtgagaatgtgcagacctacaccttcaggctccat
gaggctgcagattacccgtggaggcctgctcttacagcatttgaattccaaaagcttctc
cacaacttgacttccatcaagatccgtgggacatacagtgagagaagtgccggtcacctg
gatgacgtcaccatcacgagtgctcgccccggagcaggtgtgcctgtggcctgggtggag
agctgctcatgtccagtgggatacgaggggcagttctgtgagcgctgcaccgctgggtac
cgccgagagaccccaagcctcgggccctacagcccctgcgtgccctgcacgtgcaacggg
cacagcgagacgtgtgatcccgagacgggcgcgtgcaattgcagggataacacggcgggg
actcactgtgagaagtgcagcgatgggtattacggcgatgccacggccggcacggcctcc
gactgccagccctgcccgtgcccaggcacctcgagctgcgccattgtgccccgcaccaag
gaggtcgtgtgcaccagctgccaggctggcactacaggcaagaggtgtgagctgtgtgat
gatgcctatttcggagacccgctgggcagaaacggtgccgtgaggccctgccgcctgtgc
cagtgcaacaacaacatcgaccccaatgccgtgggcaactgcgaccgccagaccggcgag
tgcctcaagtgcatctacaacaccgccggcttctactgtgaccgctgcaaggatggcttc
ttcgggaaccccctggcccctgaccccgctgacaagtgcagagcttgtcactgcaatccc
tacggcacagtgaatcagcagacgatctgcaatcaagtgactgggcagtgtgagtgcttg
tctcacgtcactgggagggactgcagtgcctgtgagcctggattcttcaacctccagagt
ggacgtggctgtgagaggtgcaactgccacgcgctgggctccaccagcgggcagtgtgac
atccggacggggcagtgcgagtgccagccaggcgtcaccggccagcactgtgacagatgt
gagggcaaccacttcggctttggctctgaaggctgtaaaccctgcgactgtgatcctgag
ggctcgcggtccctgcagtgccgggagaacggtcactgtgagtgcaaggaaggcttcgtg
gggagccgctgcaaccagtgtgaggagaattatttctacaaccgctcgtggccaggctgc
caggagtgtccagcctgttacagactagtgaaagataaggtggcagagcaacgtcaaagg
ctgcaggagttggaaaatcttatagcaaatctgggtaccagagaagaaactgtaactgat
gaagccttcgaagagcggttgaagcaggcagaaagagaagttacggagctgctccatgaa
gcacaaaagagcaaagacgtagatcagggactcatggatcgtctcaaagacatcaacagc
accttagtgagtcagctcaacaggctgaggaacatccagggcacagtgcaggacacggag
aacctggcggagcaggcccgggtgcgggtggaggacactgaggacctgatcagcatggct
tctgatatgttggagagggccaggatggcagctgacaacgtgtccattacacctccagag
caaagcggggaccccaacaacatgactctgttggcagaagaggcccgtaagctggcagaa
aggcataaaaaggaagctgatgagattgttcgcacagccaaggctgcaaatgatacttcc
acggaagcgtatcaactgctgctgaagacactggctggagaaaaccaaactgcaattgat
attgatgagctcaaccagaagtacaatcaagcaaggaatatttctcgagacctggagaaa
caggccaacaaggtgcttgcagaggcagaggaagctggaaacagagccctgcagatatat
gctaatctcaccagcctgcctactgtggattccacggggctagagaataaagcaaataag
atcaagaaggaagcagaggagctggatcaactaattgccaggaagctaaaggattacgaa
gacttgagagaagatatgaaaggaaaggagctagaagtaaagaacctcttggagaaaggg
aaaacagagcaacagactgcagaccagctcttggctcgagcagatgcagcaaaagccctg
gctgaagaagctgctcggaagagcagtggcacactacaggaggccaataccattctcagg
aacctgaaagacttcgacaggcgggtgaacgataacaagacggcggccgaggaggcactg
aagaagatccctgccatcagccggaccattgcagaggccaacaacaagactcaccaggca
gagctggcactgggcaacgctgctgctgatgcccgtgaggccaaggccagagcagatgat
gctgagaagattgccagctctgttcagaagagtgctgctgctaccagagccgaagccgac
aagacctttgctgatgtgacaggactggccagggaagtggatgacatgatgaagcagctg
caggatgcagaaaaggagctgaagcggaagcaggccgatgctgagcaggatatgaagatg
gcaaatgaggcctcacaggctgcccaggaggcagaagacaatgcaagaaaagctaagaac
tctgtgaacagcctgctcactgtcattaatgacctgttggatcagctagggcaactggag
acagtggacttgaacaaactgaatgaaattgaaggtaccctgaacagtgccaaagaccag
atgaaagatagtgacctggaccagaaagtgtctttccttgagagagaagccaagaagcaa
gatgatgcgatacaggcctacaacagggacattgaagagatcctgaaggacattagcaac
ctggaagacatcaggaagactttgccatctggctgtttcaacaccccgtccattgagaaa
ccctaa
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