Vidua macroura (Pin-tailed whydah): 128811281
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Entry
128811281 CDS
T11570
Symbol
PTCH2
Name
(RefSeq) LOW QUALITY PROTEIN: protein patched homolog 2
KO
K11101
patched 2
Organism
vmc Vidua macroura (Pin-tailed whydah)
Pathway
vmc04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
128811281 (PTCH2)
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Motif
Pfam:
Sterol-sensing
TRA2_N
Patched
Motif
Other DBs
NCBI-GeneID:
128811281
NCBI-ProteinID:
XP_053840735
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All DBs
Position
9:complement(23188455..23210162)
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AA seq
1431 aa
AA seq
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MGAAAAAAANGSGGGGAAPAPPAPXLPFRGAAGGRRRTHSPPSAPAPAPARPRRAHGGRR
RARPHITGVPSPASRPAMPAEPPRAAPPPLRAARRKPLPEGRAVGQTTPLWLRARFQALL
FALGCRIQRHCGKVLFVGLLVFGALAVGLRVASIETDIEHLWVEAGSRVSQELRYTKEKL
GEESVYTSQMLIQTPKKDGDNILTQEALQLHLEAALAASKVQVSLYGKSWDLNKICYKSG
VPIIENGMIERMIEKLFPCVILTPLDCFWEGSKLQGGSAYLPGRPDIQWSNLDPLQLMEE
LGQFTSLEGFKELLDKAEVGQAYMERPCLDPRDPQCPSSAPNKQSQQSPDIPAELSGGCH
GFSRKFMRWQQELILGGTTKDSQGKLLRAEALQTMFLLMSPRQLYEHFKDDYEIHDISWS
EEKAGAILEAWQRKFVELAQDSIPPNATQSVHAFSTTTLNDIMKSFSDVSVIRVAGGYLL
MLAYACVTMLRWDCSKSQGAVGLAGVLLVALSVASGLGLCSLLGISFNAATTQVLPFLAL
GIGVDDMFLLAHAFTETSQHIPFKERTGECLKRTGTSVALTSVSNMIAFFMAALVPIPAL
RAFSLQAAVVVVFNFAMVLFVFPAVLSLDLHRREKRRLDILCCFYSPCSSRVIQIQPQEL
ADANDNHACHPSPYGHPGMATSTQITTTVQAFTRCDPSGHHIVTVLPPTSQVCTSPAILL
PHSDPLGSQVFTPSSSTRDLLSQLDEAKGGRECVPLPFCRWSLADFAREKYAPLLLRTRT
KVVVVVLFLALLGLSLYGTTMVHDGLYLTDIVPRDTKAHAFISAQFKYFSFYNMFIVTKG
GFHYPGAQAALLSLHQAFSTVKYVVREGNRDLPKMWLHYFQDWLRGLQATFDRDWQAGRI
THDSYRNGSEDGALAYKLLIQTGNKKEPFNFNQLTTRRLVDENGIIPPDTFYICLTVWAS
NDPLGFAASQANFYPPPPEWIHDKYDTTGENLRIPAAQPLEFAQFPFYLSGLRRTSDFVE
AIESVRAICQEAAQRHGVLSYPSGYPFLFWEQYIGLRHWFLLAISILLACTFLVCALLLL
NPWTAGIIVSILAMIAVELFGIMGLMGIKLSAIPVVILIASVGIGVEFTVHVALGFLTAA
GSRNVRSAAALEHTFAPVMDGAVSTLLGVLMLAGSEFDFIMRYFFAVLTILTLLGLLNGL
VLLPVLLSVIGPPPEASLVDNGPCLPSPESIPPCLGPGGLYVRRAPAWPATFPEPSNTEH
YMESVGPGSPRGPFVVPPAPAHILLEAGKDPSFPRITVLKPYKDSLDVQGKKEASGPQPS
APLPFGEPCTTLPRDPPQPGPPGTRPAPPAALPTYSTHLQGPAGSYTTVTATASVTVALH
PTLPGSYPTFSPEGFTSSEQDCLDEPSTSGTAVPDTFEMQNMGHHRAGAWR
NT seq
4293 nt
NT seq
+upstream
nt +downstream
nt
atgggcgctgccgcggcggcggcggccaatgggagcggcggcggcggcgcggccccggcg
ccccccgcccgcctcccctttagaggcgcggcgggcggccggcggcgcacacacagccct
ccatccgcaccggcaccggcaccggcacggccccgccgcgcgcatgggggccgccgccgc
gctcggccccacataacgggggtgcccagccccgccagccgccccgccatgccggccgag
cccccccgcgccgcgccgccgccgctccgcgccgcccgccgcaagccgctgcccgagggc
agggccgtgggccagacgaccccgctgtggctgcgggcccgatttcaggcgctgctcttc
gccctgggttgccggatccagcggcactgcgggaaggtgctcttcgtggggctgctggtg
tttggggctctggccgtgggactacgggtggcctccatcgagaccgacatcgagcacctc
tgggtggaagcgggcagccgggtgagccaggagcttcgctacaccaaggagaagttgggc
gaggagtccgtctacacctcccagatgttgatccagaccccgaagaaggatggtgataac
atcctgacacaggaggccctgcagctccacctcgaggcggccttggccgccagcaaggtt
caagtctcactgtacggaaaatcgtgggatttgaacaagatctgctacaagtcaggtgtc
cccatcattgagaatggcatgattgagaggatgatagagaagctgttcccctgtgtgatc
ctgacaccgctggactgcttctgggaaggctccaagctgcagggaggctcagcctatctc
ccgggccgcccggacatccagtggagcaacctggaccctctgcagctgatggaggagctg
ggccagttcacatccctggaaggcttcaaagagctgctagacaaggcagaggtgggacag
gcttacatggagcggccctgcctggacccccgggacccccaatgtccctccagcgctccc
aacaagcagagccagcagagccctgacatcccggccgaactctcggggggctgccacggc
ttctccaggaagttcatgcgctggcagcaggagctgattttaggtggcacgaccaaagac
tcccagggcaagctgctacgcgccgaggccctgcagaccatgttcctcctcatgagcccc
cggcagctctatgagcatttcaaggatgactacgagatccatgatatcagctggagcgag
gagaaggcaggagccatcctggaggcctggcagaggaaatttgtagagctggcacaggac
tccatccctcccaacgccacacagagtgtccatgctttctccaccaccacactcaatgac
atcatgaagtccttctctgacgtcagcgtcatccgggtggctgggggctacctcctcatg
ctggcctatgcctgtgtcaccatgctgcggtgggactgctccaagtcccaaggggctgtg
ggcctggctggggtcctgcttgtggccctctccgtcgcctccggcctggggctttgctca
ctgctgggcatttccttcaatgcagccaccacccaggtcctgcccttcctggccctcggc
attggggtggatgacatgttcctcttggctcacgccttcaccgagacgagccagcacatc
cccttcaaggagcggacaggtgagtgtctgaagcgcacagggaccagtgtggctctcacc
tcggtcagcaacatgatcgccttcttcatggcagccctggtgcccatccctgccctgcgt
gccttctccctccaggctgcagtggttgttgtgttcaacttcgccatggtgctctttgtt
ttccctgctgtcctgagcctggacctgcaccgccgggagaaacgccggctcgacatcctc
tgctgcttctacagcccttgctcatcaagggtcatccagatccagccccaggagcttgct
gatgccaatgacaaccatgcttgccacccatctccttatgggcaccccggcatggccacc
agcacccagatcaccaccactgtgcaagccttcacccggtgtgacccctcgggccaccac
attgtcaccgtcctgccacccacgtcccaggtgtgcacctcacctgccatcctcctgccc
cacagtgaccccttgggctctcaggtcttcaccccatccagctccacccgggatctgctg
tcccagctggatgaggccaagggtgggcgggagtgtgtccccctgcccttctgccgctgg
agcctcgctgatttcgcccgggaaaagtacgccccactccttctgcgcacccggaccaag
gtggtagtggtggtgctgttcctggcactgctagggctgagcctctatggcaccaccatg
gtacatgatggcctctacctgacggacatcgtgccacgggacaccaaggcacacgccttc
atctcggcccagttcaagtacttctccttctacaacatgttcattgttactaagggtggc
ttccactacccgggtgcccaggctgccctgctgagcctgcaccaggccttcagcaccgtc
aagtatgtggtgcgggagggcaaccgcgacctgcctaaaatgtggctccattacttccag
gactggctgcgagggctccaggccaccttcgacagggactggcaggccgggcgcatcacc
catgatagctaccgcaatggctctgaggatggggcactggcgtacaagctcctcatccag
actggcaacaagaaggagcccttcaacttcaaccagctgaccacgcggcgactggtggac
gagaatggcatcatcccccccgacaccttctacatctgcctgacagtgtgggccagcaac
gaccccctgggctttgccgcctcccaggccaacttctaccccccaccccccgagtggatt
catgacaagtatgacaccacgggcgagaacctgcgaatcccagcagcccagccactggag
tttgcccagttccctttctacctgagcgggctgcgtcgcacgtccgacttcgtggaggcg
attgagagcgtacgggccatctgccaggaggccgcccagcgccacggcgtgctgagctac
cccagcggctatcccttcctcttctgggagcagtacatcggcctgcggcactggttcctg
ctggccatcagcatcctgctggcctgcaccttcctcgtctgcgccttgctgctgctcaac
ccctggaccgccggcatcatcgtctccatcctggccatgattgctgtggaattgtttggc
atcatggggctgatgggcatcaagctgagcgccatccctgtggtcatcctcattgcctcg
gtgggcatcggtgtggagtttactgtccacgtggccctgggcttcctgacagctgcgggg
agcaggaacgtgcgctcagccgcagcattggagcacacttttgcgcctgtgatggatggt
gctgtctccactctcctgggtgtcctcatgctggctggctctgagtttgatttcatcatg
aggtatttctttgcggtgctgaccatcctgacgctgctggggctgctcaacgggctggtg
ctgctgcctgtgctgctctctgtcatcgggccaccccctgaggcatccctggtggataat
ggcccctgcctaccctcaccagagtcgatacccccatgtctgggccctgggggactgtac
gtccggcgcgccccagcctggcccgccaccttccctgagccctccaacacggagcactac
atggagagcgtggggccaggcagcccacggggacccttcgttgtgccccctgccccagca
cacatcctactggaggctggcaaggaccccagcttcccccgcatcactgtgctgaagccc
tacaaggacagcctggacgttcaggggaagaaagaggcttctggccctcagccttcagct
cccctgcccttcggggagccgtgcaccacgctgccccgagatcccccgcagcccggccca
ccgggcacccggccagcgccccccgcagccctgcccacctacagcacccacctgcagggt
cctgccggcagctacaccaccgtcacggccaccgcatcagtgacagtggccctgcacccc
acactgcctggctcctaccccaccttcagccccgagggcttcaccagcagtgagcaggac
tgcctggacgagcccagcaccagcggcaccgcagtgcccgacacctttgagatgcagaac
atgggacaccacagggcaggtgcctggcgctag
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