Vidua macroura (Pin-tailed whydah): 128811447
Help
Entry
128811447 CDS
T11570
Symbol
COLGALT2
Name
(RefSeq) procollagen galactosyltransferase 2
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
vmc Vidua macroura (Pin-tailed whydah)
Pathway
vmc00310
Lysine degradation
vmc00514
Other types of O-glycan biosynthesis
vmc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
128811447 (COLGALT2)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
128811447 (COLGALT2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
vmc01003
]
128811447 (COLGALT2)
Enzymes [BR:
vmc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
128811447 (COLGALT2)
Glycosyltransferases [BR:
vmc01003
]
O-Glycan biosynthesis
O-linked Gal type
128811447 (COLGALT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
DUF7438
Aminotran_4
Motif
Other DBs
NCBI-GeneID:
128811447
NCBI-ProteinID:
XP_053841062
LinkDB
All DBs
Position
9:8623195..8668987
Genome browser
AA seq
503 aa
AA seq
DB search
MEEPPSYPEEIGPKHWPSSRFTHVMKLRQAALRTAREKWSDYILFTDADNLLTNPETLNL
LIAENKTLVAPMLESRSLYSNFWCGITPQGYYKRTLEYPLIREWKRMGCFAVPMIHSTFL
IDLRKEASAKLAFYPPHQDYTWSFDDIMVFAFSSRQAGVQMFVCNREHYGFLPMPLKPQQ
SLQEEAENFVHTLIEAMIDRPPVEPSQYISVPPKHPDKMGFDEIFMINLKRRKDRRDRML
RTLYEQEIAVKVVEAVDGKALNTSQLKALSIEMLPGYRDPYSSRPLTRGEIGCFLSHYYI
WKEVVSRGLEKTLVIEDDVRFEHQFKRKLMKLMDDIEQAQLDWELIYIGRKRMQVQEPER
AVPNVRNLVEADYSYWTLGYAISFHGAQKLIGAEPFSKMLPVDEFLPIMYNKHPVTKYME
YYESRDLKAFSAEPLLVYPTHYTGQPGYLSDTETSTIWDNETVSTDWDRTHSWKSRQQGK
IHSDAQNKDALPSLDTPSSRDEL
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggaggaacccccgtcttacccagaagaaattgggccaaagcattggccaagctctcga
ttcactcatgtgatgaagctgcgacaggctgccctgcgcactgctcgggagaagtggtca
gactatatcctgtttactgatgcagataatttactgaccaacccagagaccctgaacctg
ctgatagcagaaaacaagaccctggtggcaccgatgctcgagtcccgctccctctactcc
aacttctggtgtggcatcactccccagggctactacaagaggaccttggagtatcccctg
attcgggaatggaagaggatgggctgttttgctgtccccatgatccattccacgttcctc
attgacctgaggaaggaggcctctgccaagctggcgttctaccccccacaccaggactac
acctggagtttcgatgatatcatggtctttgccttctccagtcgccaagcaggagttcag
atgttcgtctgcaaccgtgagcactacggcttcctgcccatgcccctgaagccacagcag
tcgctgcaggaggaagctgagaattttgtgcacaccctgatcgaggccatgatcgatcgc
cctcccgtggagccctctcagtacatctctgtccctccgaagcaccctgacaagatgggg
tttgatgaaattttcatgatcaacctgaagcgtcgcaaggaccggcgggatcggatgctg
cggacgctctacgagcaggagattgcagtgaaggtagtggaggctgtggatggaaaagca
ctgaacacgagtcagctcaaagctctgagcatcgaaatgctgccaggataccgggacccc
tattcctccagacccctgaccagaggagagatcggctgcttcctgagccattactacatc
tggaaggaggtggtgagcaggggcctggagaagacactcgtcattgaggacgacgtgcgc
ttcgagcaccagttcaagaggaagctcatgaagctgatggacgacatcgagcaagcccag
ttagactgggagctgatctacattggccggaaaaggatgcaggtgcaggagcccgagaga
gccgttcccaatgtccggaacctggtggaagctgattactcctactggaccctgggctac
gccatctccttccacggggctcagaagctcatcggggctgagcccttcagcaagatgctg
cctgtggatgaattcctgcccatcatgtacaacaagcaccctgtcacaaagtacatggag
tactacgagtccagagacttgaaggccttctcagcagagcccctcctggtttaccccacg
cactacacggggcagccgggctacctcagcgacacggagacctccaccatctgggacaac
gagaccgtgtcaacggactgggacagaacacactcctggaagtcccggcagcagggcaag
atccacagcgacgcccagaacaaggatgccctgccctccctggacacgccgtcatccagg
gatgagctatga
DBGET
integrated database retrieval system
