Vidua macroura (Pin-tailed whydah): 128811620
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Entry
128811620 CDS
T11570
Symbol
PHGDH
Name
(RefSeq) D-3-phosphoglycerate dehydrogenase
KO
K00058
D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:
1.1.1.95
1.1.1.399
]
Organism
vmc Vidua macroura (Pin-tailed whydah)
Pathway
vmc00260
Glycine, serine and threonine metabolism
vmc00270
Cysteine and methionine metabolism
vmc01100
Metabolic pathways
vmc01200
Carbon metabolism
vmc01230
Biosynthesis of amino acids
Module
vmc_M00020
Serine biosynthesis, glycerate-3P => serine
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
128811620 (PHGDH)
00270 Cysteine and methionine metabolism
128811620 (PHGDH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vmc04147
]
128811620 (PHGDH)
Enzymes [BR:
vmc01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.95 phosphoglycerate dehydrogenase
128811620 (PHGDH)
1.1.1.399 2-oxoglutarate reductase
128811620 (PHGDH)
Exosome [BR:
vmc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128811620 (PHGDH)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
2-Hacid_dh_C
2-Hacid_dh
PGDH_inter
Motif
Other DBs
NCBI-GeneID:
128811620
NCBI-ProteinID:
XP_053841351
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All DBs
Position
9:complement(1231420..1235148)
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AA seq
530 aa
AA seq
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MALGKLQKVLISESLDPCCREILQAGGLRVTEKPGLSKEELLREIRDCDGLIVRSATKVT
AEVLEAAERLQVVGRAGTGVDNVDVEAATRKGVLVMNTPTGNSLSAAELTCGMILCLARQ
IPQAAASMKEGKWDRKKYMGMELNGKTLAVLGLGRIGREVAIRMQAFGMKTIGYDPIITA
DVSATFGVEQLPLEQIWPRCDFITVHTPLLPSTTGLLNDSTFAKCRRGVQVVNCARGGIV
DEGALLRALQSGQCGGAALDVFTQEPPKDRDLVNHPNVISCPHLGASTREAQSRCGKEIA
MQIVDMATGKGLTGVVNGQALSKAFAPQTKPWITLAKALGTVLCTAGKQVQGSVQVCTLG
TPLKEAGSYLTPAVAAGMLAGGTQKEVTLVNATLLAQEAGLKVTTTHSDVAPEPDSITGL
VQVSLQGTPHQVTGTVQGSTPVLRQINGATFKLPAPLSGPLLIYRAKASDTSALATLTGL
LSKAGAQLLSYQSSSTVAGEQWSVVGLSAPLSNLGELKPRVTEIFQLHLP
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcactgggcaagctgcagaaagtgctgatcagcgaaagcctggacccctgctgccgg
gagatcctgcaggccggcgggctccgcgtgacggagaagcccgggctgagcaaggaggag
ctgctgcgggagatccgggactgcgatgggctcatcgtccgctcggccaccaaagtcacg
gccgaggttctggaggcggcagagaggctgcaggtggtgggcagagccggcaccggcgtg
gacaatgtggacgtggaggcagccaccaggaaaggcgtcttggtcatgaacacgcccact
gggaacagcctcagcgccgccgagctcacctgtggaatgatcctgtgcctggccaggcag
atcccgcaggcagctgcctccatgaaggagggcaagtgggaccgtaagaagtacatgggc
atggagctgaacgggaagacgctggccgtgctggggctgggacgcatcggcagggaggtg
gccattcgtatgcaggcttttggcatgaagaccatcggctacgatcccatcatcaccgct
gatgtctcagccacctttggtgtggagcagctgccgctggagcagatctggccccgctgc
gacttcatcacggtgcacacgccactgctgccctccaccacggggctcctgaacgacagc
acctttgccaagtgccgccgtggcgtgcaggtggtgaactgtgcccgcggtggcatcgtg
gatgagggcgcactgctgcgggcgctgcagtcggggcagtgtggtggggctgcccttgat
gtcttcacacaggagcccccaaaggaccgtgacctggtgaaccatcccaatgtcatctcc
tgcccacatctgggtgccagcacacgggaggcacagagccgctgcggcaaggaaatcgcc
atgcagattgtggacatggccacggggaaggggctgaccggcgtagttaatgggcaggct
ctcagcaaggcttttgcaccccagaccaagccttggatcaccctggccaaggccctgggc
acggtgctgtgcacggccggcaagcaagtgcagggcagcgtgcaggtctgcaccctaggg
acacccctgaaggaggctggaagctacctgacgcctgctgtggccgcgggcatgctggct
ggagggacacagaaggaagtgaccctggttaacgccacactgctggcccaggaggctggg
ctgaaggtcacaaccacccacagcgatgtggcccccgagcccgacagcatcaccggtctg
gtgcaggtgtccctgcagggcaccccacaccaggtgacggggacggtgcagggcagcacg
ccggtcctgcggcagatcaacggggccaccttcaagctgccagccccgctgtctggccct
ctcctcatctacagagccaaagcctctgacaccagtgctctggccacgctgaccgggctg
ctgagcaaggcaggggcccagctcctgtcctaccaaagctccagcacggtggcaggggag
cagtggagtgtcgtggggctctcagcccccctgtccaacctcggcgagctaaagccacgt
gtcacagaaatctttcagctccatctgccgtag
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