Vidua macroura (Pin-tailed whydah): 128812162
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Entry
128812162 CDS
T11570
Symbol
ITGB1
Name
(RefSeq) integrin beta-1
KO
K05719
integrin beta 1
Organism
vmc Vidua macroura (Pin-tailed whydah)
Pathway
vmc03271
Virion - Rotavirus
vmc04145
Phagocytosis
vmc04510
Focal adhesion
vmc04512
ECM-receptor interaction
vmc04514
Cell adhesion molecule (CAM) interaction
vmc04517
IgSF CAM signaling
vmc04518
Integrin signaling
vmc04530
Tight junction
vmc04810
Regulation of actin cytoskeleton
vmc04820
Cytoskeleton in muscle cells
vmc05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
128812162 (ITGB1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128812162 (ITGB1)
04514 Cell adhesion molecule (CAM) interaction
128812162 (ITGB1)
04517 IgSF CAM signaling
128812162 (ITGB1)
04518 Integrin signaling
128812162 (ITGB1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
128812162 (ITGB1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
128812162 (ITGB1)
04530 Tight junction
128812162 (ITGB1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
128812162 (ITGB1)
04810 Regulation of actin cytoskeleton
128812162 (ITGB1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
128812162 (ITGB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vmc04131
]
128812162 (ITGB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vmc04147
]
128812162 (ITGB1)
04515 Cell adhesion molecules [BR:
vmc04515
]
128812162 (ITGB1)
04090 CD molecules [BR:
vmc04090
]
128812162 (ITGB1)
Membrane trafficking [BR:
vmc04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
128812162 (ITGB1)
Exosome [BR:
vmc04147
]
Exosomal proteins
Proteins found in most exosomes
128812162 (ITGB1)
Cell adhesion molecules [BR:
vmc04515
]
Integrins
Integrin beta subunits
128812162 (ITGB1)
CD molecules [BR:
vmc04090
]
Proteins
128812162 (ITGB1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
128812162
NCBI-ProteinID:
XP_053842387
LinkDB
All DBs
Position
1:14372222..14415255
Genome browser
AA seq
803 aa
AA seq
DB search
MAETNFKWLTCAGVLCCLIWNGFAQQGGSDCIKANAKSCGECIQAGPNCGWCKKTDFLQE
GEPTSARCDDLAALKSKGCPVEDIENPRGSKQVLENREVTNRKKGAAEKLKPEAITQIQP
QKLSLHLRVGEPQTFSLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTALMLEMEKI
TSDFRIGFGSFVEKTVMPYISTTPAKLRNPCTGDQNCTSPFSYKNVLSLTSEGNKFNELV
GKQHISGNLDSPEGGFDAIMQVAVCGEQIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLP
NDGKCHLENNVYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQAVYKELKNLIPKSA
VGTLSSNSSNVIQLIIDAYNSLSSEVILENTKLPKGVTISYKSFCKNGVNDTQEDGRKCS
NISIGDEVRFEINITANECPKKEQNETIKIKPLGFTEEVEINLQFICECQCQSEGEPNSP
ACHAGNGTFECGACRCNEGRIGRLCECSTDEVNSEDMDAYCRRENSTEICSNNGECICGQ
CVCKKRENTNEVYSGKYCECDNFNCDRSNGLICGGNGICKCRVCECFPNFTGSACDCSLD
TTPCMASNGQICNGRGTCECGTCNCTDPKFQGPTCEMCQTCLGVCAEHKDCVQCRAFDKG
EKKETCSQECMHFNMTRVDSRDKLPQPGQPDPLSHCKEKDVDDCWFYFTYSVNSNGEANV
HVVETPECPSGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKW
DTGENPIYKSAVTTVVNPKYEGK
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggccgagactaatttcaaatggctcacttgtgctggcgtcctctgttgcttaatatgg
aatggatttgctcagcaaggtggaagcgactgcataaaagctaatgcaaagtcatgtggg
gaatgtatacaagcaggaccaaactgtggctggtgtaaaaaaacagactttttgcaagaa
ggagagccaacatctgcccggtgtgatgacttggcagcactgaagagtaaaggctgccct
gtggaagacatagaaaatcccagaggcagcaagcaggtgctcgaaaatagagaagtaaca
aatcgtaagaaaggtgctgcagagaagctgaaaccagaagccattacacagatccagcca
cagaaattatcactgcatctaagagtcggggagccccagacattttcattaaaattcaag
agagctgaagactaccccattgacctttattatcttatggacctctcctattctatgaaa
gatgatttagagaatgtgaagagtcttggaacggctctgatgttagagatggaaaaaata
acttcagactttcggattggctttggctcttttgtggagaaaactgtgatgccttatata
agtacaacacctgccaaactcagaaatccttgtacaggggaccagaactgtacaagtcca
tttagctataaaaatgtgctcagccttaccagtgaaggaaacaagttcaatgaacttgta
ggtaaacagcacatttctgggaacttagattctcctgaaggtggatttgatgcaataatg
caggttgcagtttgtggggaacaaattggttggaggaatgttacaagactattagttttt
tccacggatgctggattccacttcgcaggagatggtaaacttggtggaattgttctacca
aatgatgggaaatgtcatctggaaaataatgtgtacacaatgagccactattacgattat
ccctctattgctcatctggtacagaaacttagtgagaacaatattcagacaatctttgct
gttactgaagagtttcaggcagtctataaggaactgaaaaatctgataccaaaatcagca
gtgggaacattgtcttcaaattccagcaatgtgattcagctgatcattgatgcatacaat
tccctttcttcagaggttatcctggaaaatactaagctaccaaaaggagtgacaatcagt
tacaagtctttctgcaagaatggagtgaatgacacacaagaagatggaaggaagtgttct
aacatttcaattggagatgaggttagatttgagattaatataacagctaatgaatgtcca
aagaaagaacaaaatgaaacaattaaaattaaaccactgggattcactgaagaagttgaa
attaatctccagttcatctgtgagtgtcagtgtcagagtgaaggagaacctaatagtcca
gcctgccatgcaggaaatggaacatttgaatgtggtgcgtgcagatgcaatgaaggacgt
attggaagactatgtgaatgtagcacagatgaagtaaatagtgaggatatggatgcttac
tgcaggagggagaacagcacagaaatctgcagtaacaatggagaatgcatttgtggacaa
tgtgtgtgcaagaaaagggagaacaccaatgaggtgtattctggcaaatactgtgaatgt
gacaacttcaactgtgatcgatcaaatggtttaatctgtggaggaaacgggatctgcaag
tgcagagtgtgcgagtgtttccccaacttcactggcagcgcctgcgattgttctttggat
actacaccgtgtatggcatctaatgggcagatttgcaatggaagaggaacctgtgaatgt
ggcacctgtaactgtacagatcccaaattccaaggccccacgtgtgaaatgtgtcagact
tgcctcggtgtctgtgcagagcacaaggactgtgttcagtgcagagctttcgataaggga
gagaagaaggagacatgttcccaggaatgtatgcacttcaacatgacgcgcgtggacagc
cgggacaagctgccgcagcccggccagcccgaccccctgtcccactgcaaagagaaggat
gttgatgactgctggttctacttcacttattctgtcaactcaaacggtgaagccaatgtc
cacgtggtggagaccccagagtgccccagcggtcctgacatcattcccattgtagctggt
gtggttgctggaattgttcttattggacttgcattattattgatttggaaactactaatg
atcattcatgacagaagagaatttgctaaatttgaaaaggagaagatgaatgccaagtgg
gatacgggtgaaaatcctatttacaagagtgcagtgacaactgtggtcaatcctaaatat
gagggaaaatga
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integrated database retrieval system
