Vidua macroura (Pin-tailed whydah): 128812911
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Entry
128812911 CDS
T11570
Name
(RefSeq) cadherin-12 isoform X1
KO
K06804
cadherin 12, type 2, N-cadherin 2
Organism
vmc Vidua macroura (Pin-tailed whydah)
Pathway
vmc04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
128812911
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
vmc04515
]
128812911
Cell adhesion molecules [BR:
vmc04515
]
Cadherins
Major cadherins
128812911
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Ig_CLSTN
Ig_Cad99C_N
Cadherin_CELSR2_9th
Cadherin_2
Stevor
ASFV_J13L
RIFIN
YxzE
DUF443
Motif
Other DBs
NCBI-GeneID:
128812911
NCBI-ProteinID:
XP_053843552
LinkDB
All DBs
Position
1:77160384..77313060
Genome browser
AA seq
793 aa
AA seq
DB search
MLTRNCLSLLLWVLFDGGLLTPLHPQAQEILEAQPRENVVPVPGRRSSAQRVKRGWVWNQ
FFVLEEYMGSEPQYVGKLHSDLDKGVGTVKYTLSGDGAGTVFTIDETTGDIHAIRSLDRE
EKPFYTLRAQAVDVDTKKPLEPESEFIIKVQDINDNEPKFLDGPYIASVPEMSPVGAYVL
QVKATDADDPTYGNSARVVYSILQGQPYFSIDPKTGVIRTALPNMDREVKEQYQVLIQAK
DMGGQLGGLAGTTTVNITLTDVNDNPPRFPKSIFHLKVPETSHIGSAIGRIRAVDPDFGK
NAEIEYNIVPGDGGNLFDITTDEYTQEGVIKLKKPLDFETKKAYTFKVEASNLHLDHRFH
SVGPFKDTATVKINVLDMDEPPVFSKPMYTMEVYEDTPVGTIIGAVTAQDLDAGSSSVRY
FMDWKNDVDSYFTIDATEGTIATNQLLDRESTAQYNLSIIASKVSNPLLTSKVNVIINVL
DVNEFPPEISVPYETSVCENAKPGQVIQTITAADKDLSPAGQRFSFKLSSEASNKPNFTV
HDYRNNTAGIETRRNGYSRRQQELYFLPVVIEDSSYPVQSSTNTLTIRVCRCDSDGTIQS
CNVEAIFLPVGLSTGALIAILLCIVILLVIVVLYVALRRQKKKDTLMTSKEDIRDNVIHY
DDEGGGEEDTQAFDIGALRNPKVIEDNKIRRDIKPDTLRFTRHRPPAEDNTDIRDFINQR
LQENDVDPSAPPYDSLATYAYEGNGSVAESLSSIDSLTTEADQDYDYLSDWGPRFKILAD
MFGEESYNPDKVT
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgctcacaaggaactgcttatccctgcttctctgggtcctgtttgatggaggtctccta
acaccactgcatccacaagcacaagagatcttagaagcacagccaagagaaaatgttgtc
ccagtgccagggaggagatcatctgcccagcgagtcaaacgaggctgggtgtggaatcaa
ttttttgtgctggaggagtacatgggctctgaacctcagtatgtgggaaagcttcactct
gacttggacaagggcgtcggcactgttaaatataccctttcaggagatggtgctggcacg
gtttttaccattgatgagaccacaggagacatccatgccataaggagcctagatcgagaa
gaaaaacctttctacacactccgggctcaggctgtggatgttgacaccaagaaaccacta
gagcctgaatcagagttcatcatcaaagtgcaggacattaatgataatgagccaaagttt
ctggatgggccttatattgccagtgtcccagaaatgtctccagtgggagcatacgtgctt
caagttaaggcgacagatgccgacgatcccacttatggaaacagtgctagagtggtttac
agcattcttcaggggcaaccatatttctccattgatcccaagacaggtgtaataagaaca
gctttgccaaatatggacagagaagtgaaagaacaatatcaagttctaatccaagccaag
gacatgggaggacagctgggaggactagctggtactaccactgtaaacattactctcacg
gatgtcaacgacaacccacccagatttcctaagagtatcttccatttaaaagtacctgag
acctctcacattggttctgctattggacggatcagagctgtggaccctgattttgggaaa
aatgcagaaattgagtacaacatagttccaggagatggaggaaacttgtttgacatcacg
acagatgagtacacccaggaaggagtcattaaactgaaaaagccattagactttgaaaca
aagaaggcatacacctttaaggtggaggcctccaatctccatcttgaccatcgatttcac
tcagtgggtccattcaaagatactgccactgtgaagataaatgtgttggacatggatgaa
cctccagtgttcagcaagcccatgtacacaatggaagtctatgaggatacaccagtgggg
accattataggtgcagtgacagcacaagacctcgatgctggcagcagctcagttagatac
ttcatggattggaagaacgatgtggacagttactttacaatagacgctactgaaggaacc
attgctacgaatcaattactggacagagaaagcacagcacaatacaatctctctataatt
gcaagtaaagttagtaacccactattaaccagcaaagtcaatgttataataaatgttttg
gatgtcaacgagtttcctcctgaaatttcagttccatatgagacatctgtatgtgaaaat
gccaagccaggacaggtgatacagaccatcactgcagcagataaagatttgtcaccagct
gggcaaaggttttccttcaaactgtcatctgaggcttccaacaaaccaaacttcacagtc
catgactacagaaacaacacagctgggattgaaaccaggagaaatggctacagcagaagg
cagcaagagctgtactttcttccagtagtaattgaagacagcagttaccctgtccagagc
agcacaaacactttgactatccgtgtttgcagatgtgattctgatggcaccatccagtcc
tgcaacgtggaagcaatcttcttaccagtcggcctcagcacaggagctttgattgcaatc
ttgttgtgcattgttatacttctagtcattgtggtactgtatgtagcactacggaggcag
aagaaaaaagacaccctgatgacctctaaagaagacatcagagataatgttatccattat
gatgatgaaggaggtggagaagaggacacccaggcttttgacataggtgccctgaggaat
cccaaagtgattgaagataataaaatacgcagggacataaaaccagacaccttgcgtttt
acacgccacagaccaccagcggaagataacacagacataagagatttcattaatcaaagg
ctgcaggaaaatgatgtagatccatctgcacccccttatgactccttggcaacctatgcg
tatgaaggaaacggatctgttgcagagtctctgagctctatagactccttaactacagag
gcagatcaggattatgactatctgagtgactggggacctcgctttaagatcttggcagat
atgtttggagaagaaagttataaccctgacaaagtcacttaa
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