Vidua macroura (Pin-tailed whydah): 128812975
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Entry
128812975 CDS
T11570
Symbol
NOD1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1 isoform X1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
vmc Vidua macroura (Pin-tailed whydah)
Pathway
vmc04621
NOD-like receptor signaling pathway
vmc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
128812975 (NOD1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128812975 (NOD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
vmc04054
]
128812975 (NOD1)
Pattern recognition receptors [BR:
vmc04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
128812975 (NOD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
LRR_6
CARD
WHD_NOD2
LRR_4
AAA_16
FumaraseC_C
AAA_22
NPHP3_N
RNA_helicase
NB-ARC
Motif
Other DBs
NCBI-GeneID:
128812975
NCBI-ProteinID:
XP_053843681
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All DBs
Position
1:42487953..42509189
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AA seq
951 aa
AA seq
DB search
MEGQLCANVDISVNKPPAASPQSFIALLKVHRELLVGRIRNTQCLIDNLIKNDYFSTEDA
EIVVQFPTQADKVRKILDLVQSKGEEISEYFIYVLQKVTDAYYELQPWLDEIGYKPSENI
SSKPVVNTDPVSRYCQKLRHELGRDSKFFMLYAQKEEMLLEEIYSNSIMELVNFTNESLG
QVGQLEALFDDAVGLINEDGETVYVYGDAGIGKSILLQKIQSLWARKELDIGAKFFFRFR
CRMFSCFKEDEAICLKDLLFKYNCYPDQDPTEVFHHILQFPHTVLFTFDGFDEIYSNFDL
SSVPEICSPNEPIHPLALLVSLLRGKLLKGSKKILTARTGTEIQKNIIRKKVLLRGFSRN
NLKEYTAMFFKDEQRRALVSNQLEANPNLCSLCSVPLFCWIIFKCFEHFHSMFDSHELPD
SSVTLTDVFLLMIEVHLNRSVQTSLLKSNIRSQAEMFKSRKESLLALGKIAYKGMENSSF
IFEQEEVLSANISEEDLQLGFLRTVKGYSGCDSQATYEFLHLTLQSFFTALFLVMEEKVG
TKELLEFFNECSSLETAQPTCLRIPWLNKQLAGEDPFQNKEHFNFTNMFLCGLLSGSRQK
LFRHLVSPAVIKRKRKTLITYLGESMKSHLKGYTRSRLKSYNQVQMQPNFVWMLRCLYET
QSEKVGRMAARRMHANYIKLAYCNACSADCSAISFVLHHFQKHLALDLDNNNINDYGIKQ
LQPCFSKLAVIRLSVNQVTDHGVRILYEELSKYQIVSFLGLYNNQITDVGAKYVAKLIEE
CSSLEYVKIGANKITSEGGKCLAQAIQKSKTMFEIGMWGNQVGDEGAKAFAEALRNHPRL
TNVSLAFNGITTEGGKSIAEAMQHNNSVRIFWLTKNELDDEAAMSFAEMLKVNKKLVHLW
LIQNQITAKGVKCLSEALKENTTIQEICLNGNLISQEEAKAFENEERIICF
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggaaggccaactttgtgctaatgtggacatttctgtgaacaaacctccagcagcaagc
cctcagtccttcattgctttgctgaaggttcaccgagagcttctggtcggtaggatccga
aacacgcagtgtttgattgataacttgattaagaatgactacttctccactgaagatgca
gagatcgttgtccagtttcctactcaagcagataaggttcgcaaaattctagacttggtt
caaagcaagggagaagaaatttcggaatatttcatctatgtcctgcagaaagtcactgat
gcttactatgagcttcagccttggctggatgaaataggttacaagccttcagagaatatt
agtagtaaacctgtggtaaatacagatccagttagcaggtattgccagaaactcagacat
gaactgggacgggactccaagttttttatgttgtatgctcagaaggaggagatgctgctt
gaagaaatctactccaacagtattatggaactggtcaattttaccaatgagagtcttggc
caggtgggtcaattagaagccctttttgatgatgcagttgggctaattaatgaagatgga
gagactgtttatgtctacggtgatgcaggaattggaaaatccatcttgttgcaaaagata
caaagcctttgggccagaaaggaattggacataggggccaagtttttcttccgttttcgt
tgtaggatgtttagctgtttcaaggaagatgaagccatatgtttgaaagacctgctcttc
aaatataattgctacccagaccaggaccccacagaagtgttccatcacattttgcaattc
cctcatacagttcttttcacttttgatggctttgatgagatctattccaattttgatctc
agcagcgtacctgagatatgttcacccaatgaacccatccaccccctggcactgctcgta
agccttctcagaggaaagcttcttaaggggtccaagaaaattcttactgccaggacagga
actgagatccaaaaaaacatcattaggaagaaagtgttgctccgcggtttctccaggaat
aacctgaaggaatacacagctatgtttttcaaagatgagcagcgacgagcattggtatca
aaccagttggaagctaacccaaatctctgcagtttgtgttcagtgcctttattttgctgg
attatctttaaatgctttgagcacttccactccatgtttgacagccacgagcttccagac
agttctgttacattaacagatgtatttttgctcatgattgaagtgcacctgaaccgatct
gtgcaaacaagtttgctgaagagcaatatcaggagccaagcagagatgttcaaatcaaga
aaggaaagtcttctagctttgggtaaaatagcatacaaagggatggagaactcttccttt
atctttgagcaggaggaagtcttatcggcaaacatctctgaagaagatctgcaattgggc
tttctcaggacagttaaaggttacagtggctgtgacagtcaggccacttatgagttcttg
cacttaacccttcagtcttttttcacagctttgttcttggttatggaggagaaggtgggt
accaaggagttacttgagtttttcaatgaatgttcttccctggagactgcccagcctact
tgccttcgtatcccgtggttgaataaacaactagcaggggaggatcctttccaaaataaa
gaacactttaattttaccaacatgtttctttgtggcctactttctggatccaggcagaag
ctcttcagacatttagtttcacctgcggtcattaagagaaagagaaaaacactcatcaca
taccttggggagagcatgaaatcccacctgaaaggctacactcggtccaggcttaaaagc
tacaatcaggtgcagatgcagcccaactttgtgtggatgctgaggtgcctgtacgagacg
cagagtgagaaggtggggaggatggcagcccgccgcatgcacgccaactacatcaagctg
gcctactgcaacgcctgctctgctgactgcagcgccatttcctttgttctgcaccacttc
caaaagcacctggctctggatttggacaacaacaacatcaatgactatggaataaaacag
ctgcaaccttgtttcagcaagcttgcagtgatcaggctcagtgtaaatcaggtcacagat
cacggcgtaaggatcttgtatgaagaactctccaaataccaaattgtatctttcttgggc
ttatacaacaaccaaatcactgatgttggagccaaatatgttgcaaaattaattgaagag
tgttcaagcctggaatatgttaaaataggagcaaacaaaataacgagcgaaggagggaag
tgccttgcccaggccatccagaagagcaagacaatgtttgaaattgggatgtggggtaat
caagttggagatgaaggagcaaaagcatttgcagaggccctgaggaaccaccccaggtta
acaaacgtgagtcttgcattcaatggcatcacaacagagggaggcaaaagtattgctgaa
gccatgcagcacaacaactccgtgagaatattctggttgactaaaaatgagctggatgat
gaggcagcaatgagttttgcagagatgctgaaggtcaacaagaaactggtgcatttatgg
cttatccagaatcaaattacagccaaaggggtgaagtgcctcagcgaagctctcaaggag
aacacaactattcaagaaatctgcttgaatgggaacctgataagccaagaagaggccaaa
gcttttgaaaatgaagagcggatcatttgcttttga
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integrated database retrieval system
