Vidua macroura (Pin-tailed whydah): 128813002
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Entry
128813002 CDS
T11570
Symbol
RFWD3
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3 isoform X1
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
vmc Vidua macroura (Pin-tailed whydah)
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vmc04121
]
128813002 (RFWD3)
Enzymes [BR:
vmc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128813002 (RFWD3)
Ubiquitin system [BR:
vmc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128813002 (RFWD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
Beta-prop_WDR5
WDR55
zf-rbx1
zf-RING_5
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_EML_2
Beta-prop_THOC3
EIF3I
zf-UDP
zf-RING_11
Beta-prop_WDR36-Utp21_1st
Rtf2
Beta-prop_WDR3_2nd
zf-C3HC4_4
zf-RING_Vps41
Nairovirus_Gn
Beta-prop_RIG_2nd
CFAP43_N
NBCH_WD40
WD40_Prp19
WD40_2
Beta-prop_RSE1_2nd
zf-Nse
DUF7837
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
128813002
NCBI-ProteinID:
XP_053843719
LinkDB
All DBs
Position
11:15115555..15137622
Genome browser
AA seq
754 aa
AA seq
DB search
MTEMAQEEMEVDLQPVADYSVETLQTLGPEPSGHTVLSSHIPVLGEGEGSTAALPADDAV
VTASAGAREAAAEPGLQTGPAMAPSGLQRLQGVSDQHQPLPVPQLTQRQQVRRARRQQRI
GGSQRTISARAALDHYFQLSRTQEPSAGPVPHPEFPHIARDTQAQRPVETIEVSDSDSST
SEEEEEEEAVEAAAPLLPSAQETPPASSGVSSQVQAEPSQALSQATAEHENHEDESEVQQ
KQTTPLKKSEPPVPAAPLDEEEGDTCAICFEQWTNAGDHRLSALRCGHLFGYTCIERWLK
GQAGKCPQCNKKAKRSDIVVLYARTLKALDTSEQERMRSSLEKEQMLRRQAELESAQSRL
QLQVLTDECSKLRKQVQELKALVAQYNVSTLQQPGSSHTCLPSSLPSSQSQRKYHLEKVF
LVSQTGNCRVMAYCDSLSCLVVSQPSPQSTFIPGCGVKMMSLANLKSSQYIPIHSKQIRG
LAFGTRADGLLLSAALDNTLKLTSLATNTVVQTYNAGRPVWSCCWCLDDTNYVYAGLVNG
SIMIYDLRDTNSHVQELVPQKSRCPMVSLSYLPRMASASLPYGGILAGTLEGACFWEQKA
GNSYRPHHLPLEPGGCIDLQTEINTRHCLATYRPGKNNPCMRCVMMELTCSPLTEGSEDV
VCSSNPVQTFSAGPTCKLLTKSAIFQSPEDDGSVFVCAGDEASNSALLWDAGSGSLLQKL
PADLPVLDICPLEANQSHLLATLTEKMVNIYKWQ
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgacggaaatggctcaagaagagatggaagttgatctccagccagtggctgattactca
gtggagaccctccagacactcggccccgagccctctggtcacacagtgctctcgtcccac
attcctgtgctcggggaaggagaaggcagcactgcagcccttcctgctgacgatgctgtt
gtcacagccagcgctggtgcaagggaagcagctgcagagcctggcctgcagacgggtcct
gccatggcccccagtgggctgcagaggctacaaggggtgtctgatcagcaccaaccgctg
cctgtgccacagctcacacagcgccagcaagtgaggagagctcgcaggcagcagagaatt
ggtggttcccagaggacaatcagtgccagggcagcgttggaccattactttcaactcagt
aggacccaagagccatctgcaggaccagttccacacccagagttcccccatattgcgagg
gacacccaggcacagcgcccagtcgagacaatagaagtgagtgactctgacagcagcact
tctgaggaggaggaggaggaggaagcagtggaggcagcagcaccactgttaccatcagcc
caggagactcctccagcgagctcaggagtttccagtcaagtccaagcagaaccatctcaa
gctttgtctcaagctactgcagaacatgaaaatcacgaagatgagtctgaagtccagcaa
aagcaaacaacaccactaaagaaatcggagccaccagttcctgctgcacctctggatgag
gaggaaggagatacctgtgcaatctgctttgagcagtggaccaacgctggggaccaccgt
ctgtctgcgctgcgctgcgggcacctcttcggctacacctgcattgagaggtggctcaag
ggacaggcagggaagtgccctcagtgcaataagaaggccaagcgttccgacatcgtggtc
ctgtacgcccgcacgttgaaagcactggacaccagtgagcaggagcgcatgagaagctct
ttagaaaaggagcaaatgttgcggagacaggcggagctggaatctgcacagagccgtctc
cagctccaggttctgacagatgaatgcagcaagctccgcaagcaagttcaggagctgaag
gctctggtggcccagtacaatgtgagcactttgcagcagcctggcagctcccacacctgc
ctcccaagcagcctcccctccagccaaagccagcgcaagtaccacttggaaaaggttttt
ttggtgtctcagactgggaactgcagagtgatggcatactgtgactcactgagttgtctt
gtggtatcacagccttctccacagtctacttttattcctggttgtggtgtcaagatgatg
agcttggccaacctgaagagcagtcagtacatccccatccacagcaaacagattcggggc
ctggcttttggcactcgagccgatggtttgctgctctctgctgccctggacaacactctc
aaactcaccagcttggcaacaaacactgtggtgcagacatacaatgctggccgtcctgtg
tggagctgctgttggtgtcttgatgatacaaactatgtctatgctggattggtcaatggc
tctatcatgatatatgatctgagagacacaaactctcacgtccaagaactggtccctcag
aagtcaaggtgccccatggtgtcattgtcctacctgccccggatggcctcagcgtcgctg
ccttatggtgggatattggctgggaccttggaaggagcctgcttttgggaacagaaagct
ggcaactcctaccggcctcatcacctgcccctggaacccggaggctgcatcgatctccaa
acagagatcaacacgcggcactgcctggccacgtacaggcctggtaaaaataacccatgt
atgcgttgtgtgatgatggaactgacttgcagcccactgacagagggctcagaagatgtg
gtgtgttcttctaacccggttcagactttcagtgctggtcccacttgcaagttgctgacc
aaaagtgccatttttcagagcccagaggatgatgggagtgtctttgtgtgtgctggtgat
gaggcatccaattctgctctgctctgggatgctggaagcggttccttgctgcagaagctg
ccagctgacctgcctgtgctggatatctgccccttggaagcgaaccaaagccacctcttg
gctactctgacagagaagatggtgaatatctataaatggcagtga
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