Vidua macroura (Pin-tailed whydah): 128814008
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Entry
128814008 CDS
T11570
Symbol
PHF2
Name
(RefSeq) lysine-specific demethylase PHF2 isoform X1
KO
K19414
lysine-specific demethylase PHF2 [EC:1.14.11.-]
Organism
vmc Vidua macroura (Pin-tailed whydah)
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vmc03036
]
128814008 (PHF2)
Chromosome and associated proteins [BR:
vmc03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
128814008 (PHF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JHD
JmjC
PHD
Cupin_8
PHD_5
PHD_4
Motif
Other DBs
NCBI-GeneID:
128814008
NCBI-ProteinID:
XP_053845484
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All DBs
Position
13:complement(21085867..21139988)
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AA seq
1058 aa
AA seq
DB search
MATVPVYCICRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKTHGKS
TLKKKRNWHKHDTSQTMEVKPVQNGSQVFIKELRSRTFPSAEDIVVKVPGSQLTAEYLEE
KGFAEPILVPKKDGLGLAVPAPTFYVSDVENYVGPERSVDVTDVTKQKDCKMKLKEFVDY
YYSTNRKRVLNVTNLEFSDTRMSSFVEPPDIVKKLSWVENYWPDDALLAKPKVTKYCLIC
VKDSYTDFHIDSGGASAWYHVLKGEKIFYLIKPASANISLYERWQSAANHSEMFFADQVD
KCYKCTVKQGQTLFIPSGWIYATLTPVDCLAFAGHFLHSLSVEMQMRAYEVERRLKIVSL
TQFPNFETACWYMGKHLLEKFKGLHKAGQQPPAHLLQGAKILNGAFRSWTKKQALAEHED
ELPENFKPAQLIKDLAKEIRLSENASKASKADTSANPTSEEICPVEREEAPSPVQVTPLP
PPLEKLPKKKTSKTVKTPKQLKPSKPPKTPKPSKPPKTPKVKGEGKKKGKKVKESPPPAI
PNLDLLEAHTKEALTKIETPKKGKASKNVLSVPNKESASKQNEVEKFEVREQSKSKTEAK
WKYKNSKPDSLLKMEEEHKSEKTPLSGNKDNKFTFSFSNKKLLGSKGVKTHLNTSVFGSL
QNFKEDKAKPVRDEYEYVSDDGELKIDEFPIRRKKNSAKRELPFLSDKKEALHHTPVKKP
KVESVPYKSEDSSDEDLLHIDTEVKPGRNSKVKKESGSSAGILDLLQASKEVGGLEYNTN
SQPPASPSTQEAIQGMLSMANLQASESCLQTSWGTNQAKNNSFSTQNLKKTGGGGNKTAG
KRLLKKSTKNSIDIEDYDEDQDHLDACFKDSDYVYPSLESDEDNPVFKSRSKKRKSSDDA
PYSPTARVGPSVPRQDRPVREGTRVASIETGLAAAAAKLSQQEEQKGKKKKNTKKKLSAP
NASKAGQEGSSPKPKLESQASSLTDHEYTAGASTFGVTQPNRGSQPMAPGVFLTQRRPSS
SSQNNASAKGKRTKKGMATAKQRLGKILKIHRNGKLLL
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggtgcccgtctattgcatctgccggctgccctacgacgtgacccgcttcatg
atcgagtgcgacgcctgcaaggactggttccacggcagctgtgttggtgtggaagaagaa
gaggcaccagatattgacatctatcattgtccaaattgtgagaaaacccacggaaagtca
accttgaagaagaaaagaaattggcataaacatgataccagccagacaatggaggtcaag
cctgtgcagaatgggagccaagtgtttataaaagagctgcgaagtcggacatttccaagt
gctgaagacatagtggtgaaagtgccaggcagccagctgacagcagagtatttggaagag
aagggctttgcagagcccatcctggtccccaagaaggatgggctgggcctggctgtgcct
gcccccaccttctacgtcagcgacgtcgagaactacgttgggccggagcggagtgttgat
gtcactgatgtcaccaagcagaaagattgcaagatgaagctcaaggaatttgtggattac
tactacagcacaaacaggaaaagggtcttaaatgtcacaaacctggagttctctgacacc
aggatgtctagctttgtagagcctcctgatattgttaagaagctgtcctgggtggaaaat
tattggcctgatgatgctctgctggctaaacccaaagtgaccaagtactgcctgatctgc
gtgaaggacagctacactgacttccacatagactctgggggggcttctgcctggtaccac
gtgctgaagggagaaaagatcttttatctcatcaaaccagcctctgcaaatatttctctg
tatgaacgctggcagtcagcagcaaatcacagtgagatgttttttgcagaccaagtagat
aaatgttacaaatgcaccgttaaacaaggccagacactgttcatcccatcaggttggatt
tatgcaactctaacaccagtagactgcctggcctttgcaggacattttctacacagtcta
agtgtggaaatgcagatgagggcatatgaagtagaaaggcgattgaaaattgtcagtctg
acccagtttcccaactttgaaacggcgtgttggtatatggggaagcatctactagagaaa
ttcaaaggtttgcataaagctggacaacaacctcctgctcatctccttcagggagcaaag
attctcaatggtgctttcaggtcatggactaaaaaacaggctttagcagagcatgaagat
gaactaccagaaaacttcaaaccagcacaacttatcaaggaccttgccaaagaaataaga
ttaagtgagaatgcttcaaaggccagcaaagcagacacgagtgccaaccccacatctgag
gagatctgtcctgtggagagggaggaggctccatcgcccgtccaagtcacccctctgccc
ccacctctagaaaagcttcctaaaaaaaagacttccaaaactgtgaaaacccccaaacaa
ctcaagccgtccaaacccccgaagactcccaaaccctccaaacctcccaaaacaccgaaa
gtgaagggagaaggcaaaaagaaaggaaagaaggtgaaggagagcccaccaccagccatc
cccaacctcgacctgctggaggcacacacgaaggaggctctgaccaagatcgagacgcca
aagaaggggaaggcttcaaagaacgttttaagtgttcccaataaggaatctgcgagcaag
cagaatgaggtggagaaatttgaagttcgagagcaaagtaaaagcaaaacagaagccaaa
tggaaatacaagaacagtaaacctgattcacttctaaaaatggaagaggaacacaaatca
gaaaagacgcctttatctggaaataaagacaacaaattcacattctctttctctaataag
aagttgcttggttcaaagggagtcaaaactcatctgaataccagtgtgtttgggtcactg
cagaattttaaagaggacaaagccaaacctgtacgggatgaatatgaatatgtgtcagat
gacggtgaactaaaaattgatgagtttccaatcagaagaaagaagaacagtgcaaaaaga
gaactgccctttttatcagataaaaaggaagccctacatcacactcctgttaagaagcca
aaggtggagtcggtaccatacaagagcgaggactcatcagatgaagatttgcttcacatt
gacacagaggtaaagccaggacgcaattccaaagtaaagaaagagagtggaagttcagca
ggaattcttgatcttttgcaggcaagcaaggaagttgggggtttagagtataacaccaac
agccagccacctgcctcccccagcacgcaggaagccatccagggcatgctctccatggca
aacctccaggcctcagagtcctgcctgcagacgtcatggggcaccaatcaggcgaagaac
aactccttctccacacaaaacttgaagaaaactggtggtggtggcaacaaaaccgctggg
aaacggctgctgaagaaaagcacaaagaacagcatcgacatcgaggattacgatgaggac
caggaccacttggatgcctgttttaaggactcagattatgtttacccttctctcgaatca
gatgaagataatccagtattcaagtcccgatcaaagaaaaggaaaagttcagatgatgcc
ccttacagtccgacggcacgagttggcccctcggtgccccggcaggacagaccggtgcga
gaaggcacgagagtcgcctccatcgaaactggactcgccgccgctgctgccaagctgtca
cagcaggaggaacaaaaaggcaagaagaaaaaaaataccaaaaagaagctgtcagccccc
aacgcaagcaaagcgggtcaggaaggcagctcccccaagccgaagctggagtcacaggcc
agcagcctcacagatcacgagtacaccgcaggggccagcacctttggggtcacccagcct
aacaggggatcgcagccgatggcacccggtgttttcctcacacagaggagaccctcatca
tcctcgcagaacaatgcctccgccaaagggaagcgtacaaagaaggggatggccacggcc
aagcagcggctcggcaagatcctgaagatccaccggaacgggaagctactgctctag
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