Vidua macroura (Pin-tailed whydah): 128814712
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Entry
128814712 CDS
T11570
Symbol
GEMIN5
Name
(RefSeq) gem-associated protein 5 isoform X1
KO
K13133
gem associated protein 5
Organism
vmc Vidua macroura (Pin-tailed whydah)
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vmc03019
]
128814712 (GEMIN5)
03041 Spliceosome [BR:
vmc03041
]
128814712 (GEMIN5)
Messenger RNA biogenesis [BR:
vmc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
128814712 (GEMIN5)
mRNA cycle factors
P-body specific factors
128814712 (GEMIN5)
Spliceosome [BR:
vmc03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
128814712 (GEMIN5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GEMI5_RBS
TPR_GEMI5
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
Beta-prop_WDR5
Beta-prop_RIG_2nd
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_WDR3_2nd
DSE1_N
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_RIG_1st
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_Aladin
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
PAC11
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
ASA1
Beta-prop_TEP1_C
Beta-prop_WDR41
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_Nup120_160
DNAI3_WD
Beta-prop_LRRK2
Beta-prop_VPS8
TPR_IF140-IFT172
Beta-prop_IP5PC_F
WD_LRWD1
Tricorn_2nd
Lgl_C
Motif
Other DBs
NCBI-GeneID:
128814712
NCBI-ProteinID:
XP_053846811
LinkDB
All DBs
Position
15:complement(13778593..13796237)
Genome browser
AA seq
1529 aa
AA seq
DB search
MGVRALPASPNWYSSRCSDASSDGRLFGFAARHRVCLLDVAGAAPAFYGELIGHTDRISG
FAFCHCPGQSSLCASSSDDGSVKIWDSGTLSAVLEYSLHQNAISALHWSPLVKDLIVSGD
EKGVIVCYWHNRSDSQQFFPEPRTVFCLTCSPHHENLVAIGYKDGMVVVIDISRKREVVH
RLRGHEDEIHCLAWCPVPGEERLPAWQDELQAAPSEEGKVPNGELTQDTATRKGCYLASG
SKDQTIRIWSCTRGRSVMTLKLPPTKRRGGAVDPAVKERIWLTVHWPAGHPSDLVSSGFG
GELLLWNLTQPGKRKWTLLGSSEGQNHSRIVFNLSSVKHQDRELLFSISMDRDVKCWDLS
TLDCSWTMPSLGGFVYSLAFSPVDTGCLAIGVGDSMIRVWNTLSINNIYDVKTFWQSIKS
KVTALSWHPTKEGSLAFGTDDGKVGIFDTLSSSAKNKPPQISSTYHKKTVYTLAWGPPTP
PLISGEESEQPSVTLYSCAGEGIVFQHNPWKLNGEANDINKVIRDTNSIKHKLPARTEVS
WKPDGKLLALGNEDGSIEIFQAPNLKLLCTIQQHHKLINAIRWHHEHGTQPELSYLIASG
SINATIYVHNLKSVVENSSENPLTITEPFRTLAGHTAKITSLSWSPHHEGRLVSACYDGT
AEVWDVMKEEPLCNYRGHQGRLLSVQWSPVEPDCVYTGADDFSVHKWHISKQEHTRPPQG
KKSIELEKKRSIQPKVKAKKKKKPVGKSPGKQDANDAMNGDDSMKEMLLEENGVSDHEGE
KEAQEAELADKVSVTVSRDTSSSACDYSSFSLPKPFVTQKAVPVRKDPPKEKPTPDASLK
KRKPRSILPFSTLMDHRSKEELHQDCLRLAACLKTKDNNEDVSPDLKDCIHLGLFTDRDS
LHKMIDMEGKQHLENGHAELFQQLMLWKGDMKGVLQAAAERGELTDQLVAMSPMVGYQAW
VWTVEAFAKQLCFQEQYVKAASHLLSIHKVYEAIELLKVNNFYREAIVMAKARLRPEDPV
LKDLYSSWAALLEKDGHYSMAAKCYLGASSPYDAVKVLSKKGDVASLKTAAELALISGEE
ELSATLSLRCAQDLLLSRNWVGAQEVLQQHKTLFGQRLVFCLNELLCSCLSERNPSERKS
PVPPCYHSWELNREAPFFDMVTEVWQNVLGMDTTEKATCAQEQLRRIEHPPSTSNTHPKQ
VLFHISHDLALAALSCHLGTWDEAVKSILGAVTRSFDAGNFTLMQEICSIILPEGCDDLR
DKLDSTNSQSMDACRSLEGFVAYRLLYDLWWNPPKDSLGLQKAVLGAVPCPSEQTALEES
CISGDPSPEETVQTAAEMGENLCSTTEVPKSETQSDSRTDPVDVADRQSKLKGCQVLLSE
EMAALQNTQRDIAEVQETLAEMIRQHQQQRNKLQENTNGNTQGSNLEQSSETESDKPCSD
SNHMNGKDEAKQPVTLPELTKQLLKAKQKLAEFPDNLKVFPFPDVLECCLVLLHLGSQCP
PGLQEEALALLRKHGDAGVYKKAGRSFLT
NT seq
4590 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgcgggcgctgcccgcctcccccaactggtacagcagccgctgcagcgatgcc
agcagcgacggccgcctcttcggcttcgcggcgaggcaccgcgtctgcctgctggatgtc
gccggcgccgcgcccgcgttttacggggagctcatcgggcacacggacaggatctcgggc
ttcgccttttgccactgccccgggcagagcagcctctgcgccagcagctcggatgacgga
agcgtcaaaatctgggacagcgggacactgtcggcggtgctggagtacagcctgcaccag
aacgccatctcagcactgcactggtcccctcttgtgaaagatctgattgtgtctggtgat
gagaaaggtgtcattgtttgttactggcacaacagaagtgacagccagcagttcttccca
gagcccaggacagttttctgcctcacctgttctcctcatcatgaaaacctggtggccatt
ggctacaaggatggcatggtggtggtaattgatatcagcaggaagagagaagttgtgcac
cggctgaggggccacgaggatgaaatccattgtctggcctggtgccctgtgcctggggaa
gagaggttacctgcttggcaggatgagctccaggcagctccttcagaagaaggcaaggtt
ccaaatggggagctgacacaggacacagccacgaggaaaggttgttacctggcctctgga
agcaaggatcaaaccatacgaatatggagctgtaccagaggcaggagtgtgatgactctg
aagctgcctcccaccaagaggagaggtggagccgtggacccggcggtcaaggagcgcatc
tggctgactgtccactggcctgctggccacccctcagacctcgtgtccagtggctttgga
ggagaactgctcctttggaatttgacccagcctggcaaacgcaagtggactcttctggga
tcttcagaaggacaaaaccactccagaattgtgttcaatctcagttctgtgaagcaccaa
gacagagagctccttttttccatttcaatggacagagatgtgaaatgctgggatctgtca
actctggactgcagctggaccatgccctcccttggagggtttgtctacagccttgccttc
tcccccgtggacacaggctgcctcgccatcggggttggggacagcatgatccgagtgtgg
aataccttgtccatcaacaacatttatgatgttaaaaccttctggcaaagcataaagtcc
aaggttacagcattatcctggcatccaactaaggaaggctccttggcttttggaacagat
gatggaaaagttggcatatttgacaccttgtccagcagtgctaagaacaagccacctcag
atctccagcacttaccacaagaagacagtgtacacattagcctggggtcctccaactcct
cctctgatttctggagaagaaagtgaacagccctctgtaactttatatagttgtgctgga
gaaggaattgtttttcaacacaatccctggaagcttaatggagaagcaaatgacatcaac
aaagtcatcagagacaccaattcaatcaaacacaagctgcctgcacgtacagaggtcagc
tggaaaccagatggcaaactcctggctcttggcaatgaggatggctcaattgaaatattt
caggcaccaaacttgaagttgctctgcacaatccagcagcatcacaaactgatcaatgcc
attcgttggcaccatgagcacgggacccagccagagctgagttacttgatagcttcaggc
tccatcaatgccaccatttatgtgcataatctgaagagtgttgtagagaactcttcagaa
aatcctttgacaataacagagccttttcgaactctggctgggcacacagctaaaatcaca
agtctttcttggagcccccaccacgagggaagattggtgtctgcttgctatgatggcact
gcagaggtgtgggatgtgatgaaggaagagccactctgcaactaccgagggcaccagggc
cgcctgctgagtgtgcagtggtcaccagtggagccagattgtgtttatacaggagcagat
gatttctctgttcacaagtggcacatctccaagcaggagcacacacggcctcctcagggc
aaaaagagtatagaattagagaagaaaagaagtatacagccaaaagtcaaagccaagaag
aagaaaaagcctgtaggcaagagcccaggcaagcaggatgcaaatgatgccatgaatgga
gatgacagcatgaaggaaatgctgctggaggaaaatggagtgtcagaccacgaaggagaa
aaagaagctcaggaggcagagttggctgataaagtctctgtgactgtgtccagggataca
tcttcatctgcatgtgattattcttcattcagcttgccaaagccttttgtgacccagaaa
gctgtgcctgtgagaaaggatccacctaaagagaaaccaactcctgatgcctctctgaag
aagaggaagcctcgttctattctgcccttcagcacattaatggatcacagatcaaaagaa
gaattgcatcaggactgcttgaggctggctgcatgcctgaaaactaaagataataacgaa
gatgtgtcccctgacctcaaggattgcatccacctggggctgttcacagacagggattct
ctgcacaagatgattgatatggaaggaaagcagcacttggagaatgggcatgcagagctc
ttccagcagctcatgctgtggaaaggagacatgaagggtgtcctccaggcagctgctgag
agaggggagctcacagaccagctggtagccatgtcacccatggttggctaccaggcctgg
gtttggacagtggaagcctttgccaagcagctgtgttttcaggagcaatatgtgaaggct
gcctcccacctcctgtccatccataaagtctatgaggctattgagctcctgaaagtgaac
aatttttacagggaagcaattgtaatggctaaggccaggctgcgaccagaagatccagtt
ctgaaggacctgtacagcagctgggcagctctgctggagaaagatggtcattattccatg
gctgccaaatgttatttgggagcttcctcaccctatgatgcagtcaaagtgttgtcaaaa
aagggggatgtggcatctcttaaaactgctgctgagcttgctctgatatctggggaggag
gagttgtcagcaactttgtctttgagatgtgcccaagacctgctgttatccaggaactgg
gtgggagctcaggaagtccttcagcagcataaaaccttatttggacaaagactggttttc
tgcctgaatgaactgctctgcagctgcctcagtgagaggaatcccagtgagcgaaagagc
cccgtgcccccctgttaccacagctgggagctgaacagagaggccccattttttgacatg
gtgacagaagtgtggcagaatgtgctgggcatggacaccactgaaaaagccacatgtgca
caggagcagcttcgcaggattgagcatcctccttcaaccagcaacacacacccaaagcag
gtgcttttccatatctcccatgacctggccctggcagccctgagctgtcacttgggtacg
tgggatgaggcagtgaaaagtattcttggggctgtgacccgcagttttgatgctgggaat
ttcactctgatgcaggagatttgcagtatcatccttcctgagggctgtgatgacctgaga
gacaaactggacagcacaaattctcagagcatggatgcctgcaggagtctggagggcttt
gtggcttacagactgctctatgacctgtggtggaacccacccaaagactcccttggcctg
cagaaggctgtgttgggtgctgtgccatgtcccagtgagcagacagctcttgaggagagc
tgtatttcaggtgacccatcccctgaggaaacggttcaaactgcagctgagatgggtgaa
aacctctgcagtacaactgaagttcctaagagtgagacacagagtgactcaagaactgat
ccagttgatgtggcagacagacagtcaaaactgaagggttgccaagtgctcctttcagaa
gagatggctgccttgcagaacacccagagggacatagctgaggtccaggagactttagca
gaaatgatccgccagcatcagcagcagaggaacaagctccaggaaaacacaaatggaaac
acccagggaagcaacctggaacagagttcagagactgaatcagacaaaccatgctctgac
agcaaccacatgaatggcaaagatgaagcaaagcaaccggttacactccctgagctcaca
aagcagcttctgaaagcgaagcagaaattagctgaattcccagacaatttaaaggtcttc
ccattccctgacgtgctggagtgctgccttgtgctccttcaccttggatcccagtgtcct
cctgggctgcaggaagaggctctggctctccttaggaaacacggtgatgctggtgtttac
aaaaaggctggcaggagcttcttgacatga
DBGET
integrated database retrieval system
