Vidua macroura (Pin-tailed whydah): 128815241
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Entry
128815241 CDS
T11570
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
vmc Vidua macroura (Pin-tailed whydah)
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vmc01002
]
128815241 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vmc04121
]
128815241 (USP42)
Enzymes [BR:
vmc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
128815241 (USP42)
Peptidases and inhibitors [BR:
vmc01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
128815241 (USP42)
Ubiquitin system [BR:
vmc04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
128815241 (USP42)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
128815241
NCBI-ProteinID:
XP_053847757
LinkDB
All DBs
Position
16:complement(9769451..9787654)
Genome browser
AA seq
1334 aa
AA seq
DB search
MTIVNKPKSSKSKKSSSRRSDKSMKPRTKKMTSRTASLGRVPPTEDPNKVSVDKGPGGHI
YCRSSQKSKPFAQRDLVVNDGIAPPQRILFPPEKICMDWQQTQSVGVGLQNLGNTCFLNS
TLQCLTYTPPLANYMLSLEHTKSCHVEGFCMMCTMESHINQVLCCSNNAIKPTSVINGLK
RIGKHFHFGSQEDAHEFLCFTVDALQKACLNGSTKLDRSSQATTLIYQIFGGYLRSRVKC
LNCKAVSDTYEPFLDVTLDIKAVTSVTRALEQFVKPEQLDGENSYKCSKCKKMVPASKRY
TIHRSSNVLTISLKRFANFTGGKINKDVKYPEYLDLRAYMSQSIGEPLIYALYAVLVHSG
FNCNAGHYLCFIKAGNGLWYRMNDASVELSDIKTVLNQQAYVLFYIRRYDLTLGERAFYL
PAPSYPRSFLGQRGANSKQAAFMGPRLPPHMIKSSSRLNGNGPLKEDPSAVGVAVKRPSS
APPTACVQNWAISRPSMTDPSKTQKITISIHNKLPTRQAVPQAECPSSAVEEEDLKPLPS
ATITNSSTAEPTSNLSTVSVATNVSKQEVPDEIFVEPAVNGNPKLCSDNVVPFSAEPSGK
SEESKGLFKRHCNVISSNGILIGKMVHTLHNSHSSCQNAEERSQHELPKIDSLNGAISLD
NEYKENGLKLDDSTCQVQPVKPSEIFFSKANGVLEAMPKALSPDPQGILESLTYSQLNSL
SEEKSVSGPQKSSDNDGVTDTVVMEALFAYEESRKVPSNFSCEVEKLFTQSDSETIFTKE
EVPESIVTKADNAHLNINGQHKVRKKSLDTEGEFLGQCESEDIRDKDKLRRSKEPELISK
ENPLYIKGSPESKEKLGQISSIKPDIECSSKKLASLDITDKCQDTKDISNNYVEVPPVND
SSITKLDKVLESQFSRADEGPSNKICEDDDKHMKKNKKKIHDSKRTDKEHYRRKRENSDT
EEKERQTRNKPDDHSHRRRSSHSVETNKQSRHKQEYCSESKYRSSHNERNSPSNGRSSGK
YSRYRSRSRERTDPDRNRYYYSKGDRPWIRERYYQDEPRRWEKCRYYNDYYSSHGTRDGR
DRRSSHCDKDYDKLSQAYSRSHKDYHCKSRWAHSTLSREEEVHHFSSHRANFHHCSVPQQ
HSEKYSRERHALPPVSAHSNLEDSSRENEKEKLRNGKRKYSHQEESGSDIEKKFRKTDDQ
RIKKYKKVKKKKKSKDKHREKDYKHYDLDCSVLHFDNDNRKHKKKKKKKKHDRKLKDLLE
YLDPRFQKKTWEKKEESRPPDDHLCEQYRNQGSKQPYKEEKPSGAGDSKKYSSMASTEYV
RDVELTDESLQYSD
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttaacaagccaaaatcttcaaagtctaaaaaatcttcctcaagacggtct
gacaaatctatgaaaccccgtactaaaaaaatgacgtctcgcactgcaagtttgggccgg
gtaccccctacagaagatccaaacaaagtctctgtggacaaaggtcctggggggcatatt
tattgtagatcatctcaaaaatcaaagccttttgcccaaagagatctagttgttaatgat
gggattgctccgccacaaagaattctttttccacctgagaaaatctgtatggattggcaa
caaacacaaagtgttggagttggactgcagaacctcggcaacacatgtttccttaattct
actctccagtgtttgacctacacgcctcctcttgccaattacatgctttcacttgagcac
accaagtcatgtcatgtagaaggattctgtatgatgtgcacaatggaaagtcacatcaac
caggtcctgtgttgctctaataatgccatcaaacctacgtctgttatcaatggccttaaa
agaataggaaaacatttccactttggcagtcaagaggatgcacatgaattcttatgcttc
actgttgatgctttacagaaagcttgcttgaatggaagcaccaaattagacagatcttct
caagccaccacacttatttatcaaatatttggaggatatctaagatctcgagtaaagtgc
ttgaactgcaaagcagtgtcagatacgtacgagccatttctcgacgttactttggatata
aaggcagttacatctgtcaccagagctctagaacaatttgtgaaaccggaacagctggat
ggtgaaaatagctataagtgtagcaagtgtaaaaagatggttccagcgtcaaagagatac
acgatacatcgctcttccaatgttctcacaatatcactgaaaagatttgcaaactttacg
ggtggaaagatcaacaaggatgtaaaataccctgaatatttggatcttcgagcatatatg
tcccaatctattggagaacccctcatctatgctttatatgcagttcttgtacatagtggc
ttcaactgtaatgctggacactatctctgcttcataaaggctggcaatggactttggtac
cgaatgaatgatgcctcagtagagctttctgatatcaaaacagttctcaatcagcaagct
tacgtacttttttatatcaggcgctacgatctgacgctgggggagcgagccttttacctg
cccgcgccctcctacccgcgctccttcctgggccagcgcggggccaacagcaagcaggct
gcattcatgggacctcggcttcctcctcacatgattaagagttcaagtcgtttaaatgga
aatggacccttaaaagaggatcccagtgctgttggcgttgctgtaaaaaggccatcttca
gctccaccaacagcttgtgttcaaaactgggcaatttccaggccgtcaatgacagaccct
tccaaaacccagaagatcacgatcagtattcacaacaagctgcccactcggcaggcggtg
ccgcaggcggagtgtccgagcagcgctgtggaggaggaggatctgaagccccttccttca
gccacaattacaaactcttccacagcagagcctacctcaaacctctccacagtgtcagtt
gctactaatgtctccaagcaggaggttcctgatgaaatctttgttgagccagcagtgaat
ggaaaccctaagctctgttctgacaacgtggtccctttcagtgcagaaccttcaggaaaa
tccgaggagtccaagggcttgttcaaaaggcattgcaacgtcatatcttccaatggaatt
ctgattgggaagatggtccatacattgcataattcccattcatcctgtcagaatgcagaa
gaaagatcccagcatgagctgccaaaaattgattctctaaatggtgctattagtttagat
aatgaatataaagaaaatggactgaaacttgatgattccacttgccaagtccaacccgtt
aaaccttccgagattttcttctctaaagcaaatggagtgcttgaagcgatgcctaaagct
ttgtcaccagatcctcaaggtatcttagaatctcttacgtacagccagttgaacagcttg
tcagaggaaaagagtgtctctggacctcagaaatcctctgacaatgatggagttacggat
actgtagtgatggaagcactgtttgcctatgaagaatccaggaaggttccttccaacttt
agctgtgaggttgagaaactttttactcaatcagattctgaaaccatttttaccaaagaa
gaagttcctgaaagtattgtaacaaaagctgataatgcacatctcaatatcaatggtcag
cacaaggttaggaaaaaatccttggatactgaaggtgaattccttgggcagtgtgagtct
gaagacatcagagataaagacaaactaagaagatcaaaagaacctgaactcatttcaaaa
gaaaatcctttgtacatcaaaggatctcctgagagcaaagagaaattagggcaaatttcc
tctataaagcctgacattgaatgtagttctaaaaaacttgcatctctagatattacagat
aaatgccaagatacaaaggacatttctaataactatgtagaggtaccacctgttaatgac
tcttctattacaaagctggataaagtattggaaagtcaattttctagagcagacgaggga
ccgagtaataaaatatgtgaagatgatgataaacatatgaaaaaaaataagaaaaaaatc
catgactctaaaagaactgacaaagagcactaccggaggaagagagaaaactcggacact
gaggagaaggagaggcaaaccagaaacaaaccagatgatcattcccacaggaggaggagc
tctcacagcgtggaaacaaacaagcagagccgtcataagcaggagtattgcagtgagagc
aagtacagatcctcccacaatgaaagaaacagtcccagtaatggcaggagctcaggaaaa
tattctcgttacagatcccgaagcagagaaaggacagatccagacaggaataggtactat
tattccaaaggagacagaccttggattagagaaagatactatcaagatgaaccacggaga
tgggaaaaatgcaggtactacaatgattattattcctcccatggaacaagagatggtagg
gacaggaggtcctctcattgtgataaagactatgacaaattgagccaagcttacagcagg
tcacacaaggattatcattgcaaaagcagatgggctcacagcacactctcccgagaggag
gaagtgcatcacttcagcagccacagagcaaacttccaccattgttcagtacctcagcag
cactcggaaaaatactcccgtgaaaggcacgcacttccaccagtgtcagctcactcaaat
ttggaggactcttcccgggaaaatgaaaaagaaaaactaagaaatggcaaaagaaaatac
tcccaccaagaagaaagtggaagtgacatagaaaagaaattccgaaagacagatgaccaa
agaatcaaaaagtataagaaggtcaagaagaaaaagaagtccaaagataaacatcgagag
aaggattacaaacattatgatttggattgctctgtgctccactttgacaatgacaatcgc
aaacataagaaaaagaagaaaaagaagaagcacgacaggaaactgaaagacttactggaa
tatttagatcctcgtttccagaagaaaacatgggagaagaaggaagaatcccgtcctcca
gatgaccatttatgtgagcaatacagaaaccagggcagtaaacaaccctacaaggaagag
aagccttctggtgcaggtgacagcaagaaatacagctccatggcatccactgagtatgtc
agagatgtggagctgactgatgaaagccttcaatactcagactga
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