Vidua macroura (Pin-tailed whydah): 128815595
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Entry
128815595 CDS
T11570
Symbol
SHMT1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vmc Vidua macroura (Pin-tailed whydah)
Pathway
vmc00260
Glycine, serine and threonine metabolism
vmc00630
Glyoxylate and dicarboxylate metabolism
vmc00670
One carbon pool by folate
vmc01100
Metabolic pathways
vmc01200
Carbon metabolism
vmc01230
Biosynthesis of amino acids
vmc01240
Biosynthesis of cofactors
vmc04981
Folate transport and metabolism
Module
vmc_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
128815595 (SHMT1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
128815595 (SHMT1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
128815595 (SHMT1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
128815595 (SHMT1)
Enzymes [BR:
vmc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
128815595 (SHMT1)
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Paralog
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
128815595
NCBI-ProteinID:
XP_053848394
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Position
16:complement(14581268..14587051)
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AA seq
482 aa
AA seq
DB search
MASSTQGLPSAELWASHSKMVMEPLDSNDPEVHSIIKKEKQRQRLGLELIASENFASRAV
LEALGSCMNNKYSEGYPGQRYYGGTEFVDELERLCQKRALQAYQLDPQKWGVNVQPYSGS
PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSVFFESMPYKVNPKTGYI
DYDKLEENARLFHPKLIIAGVSCYSRNLDYARMRKIADDNGAYLMADMAHISGLVAAGVV
PSPFEHCDIVSTTTHKTLRGCRAGMIFYRKGTRSVDPKTGKETLYNLESLINQAVFPGLQ
GGPHNHAIAGIAVALHQAMTPEFKAYQQQVVANCKALSSALTEMGYDIVTGGSDNHLILV
DLRSKGTDGGRAERVLELCSIACNKNTCPGDVSALRPSGLRFGTPALTSRGFRQDDFRKV
AQYIHKGIELALRVQKDMSPKATLKEFKDKLEDPKYRGELKALKEEVEAFAGTFPLPGLP
VL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggcgagctccacacagggcctccccagcgccgagctctgggcctcccatagcaagatg
gtgatggagccgctggacagcaacgacccagaggtgcacagcatcatcaagaaggagaag
cagcggcagaggttggggctggagttaattgcatcggagaactttgcaagccgagcagtc
ctggaggccctgggatcctgcatgaacaacaaatactccgagggttacccaggacagagg
tactacggcgggacggagtttgtggacgagctggaaaggctgtgccagaagcgagccctg
caggcttaccagctcgacccccagaagtggggagtcaatgtccagccctactcagggtca
cccgcaaactttgcggtgtacacggccctggtggagccccacggcaggatcatggggctg
gacctgcccgatggtggccacctcacccacggcttcatgacggacaagaagaagatctct
gccacctctgtcttcttcgagtccatgccctacaaggtcaaccccaagaccggttacatt
gactatgacaagctggaggagaacgcccggctcttccaccccaagctgatcatagcaggt
gtcagctgctactcgcggaacctggactacgcccgcatgcggaagatcgccgacgacaac
ggggcctacctgatggccgacatggcccacatcagcgggctggtggccgccggcgtggtg
ccctcgcccttcgagcactgcgacatcgtctccaccaccacccacaagaccctgcggggc
tgcagggccggcatgatcttctaccgcaaaggcacacgcagcgtggaccccaagacaggc
aaggagaccctctacaacctggagagcctcatcaaccaggcggtgttcccagggctgcag
ggaggcccgcacaaccacgccattgcagggatcgccgtggcgctgcatcaggccatgaca
cccgagttcaaggcttaccagcagcaggtggtggccaactgcaaggcactctcatcagca
ctgacagagatgggctacgacatcgtcacagggggctctgacaatcacctgatcctcgtg
gacctgcgcagcaaaggcacggacggcggccgggccgagcgcgtgctggagctctgctcc
atcgcctgcaacaagaacacgtgccctggtgatgtcagtgccctgcggcccagcggcctc
cgcttcggcacgccggctctcacctcgcgcggcttccggcaggacgatttccgcaaggtg
gcccagtacatccacaaagggatcgagctggctctgcgtgtgcagaaggacatgagcccc
aaggccacgctgaaggaattcaaggacaaattggaggacccaaaataccgtggggagctg
aaggcactgaaggaagaggtagaagccttcgcaggcacgttcccgctcccggggctgcct
gtcctgtaa
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