Vidua macroura (Pin-tailed whydah): 128815628
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Entry
128815628 CDS
T11570
Symbol
SOX8
Name
(RefSeq) transcription factor SOX-8
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
vmc Vidua macroura (Pin-tailed whydah)
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vmc03000
]
128815628 (SOX8)
Transcription factors [BR:
vmc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
128815628 (SOX8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sox_N
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
128815628
NCBI-ProteinID:
XP_053848465
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All DBs
Position
16:complement(15051406..15056658)
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AA seq
468 aa
AA seq
DB search
MLNMTEEHDKALEAPCSPAGTTSSMSHVDSDSDSPLSPAGSEGLGCAPAPAPRPPGAAAL
GAKVDAAEVDERFPACIRDAVSQVLKGYDWSLVPMPVRGNGSLKAKPHVKRPMNAFMVWA
QAARRKLADQYPHLHNAELSKTLGKLWRLLSENEKRPFVEEAERLRVQHKKDHPDYKYQP
RRRKSVKAGQSDSDSGAELSHHAGTQLYKADTGLGGMADSHHHGDHTGQPHGPPTPPTTP
KTDLHHGSKQELKHEGRRLVESGRQNIDFSNVDISELSSEVINNMETFDVHEFDQYLPLN
GHAALPAEHGANAASYGASYAHSGAAAQVWTHKSPAAASPAAPEPGQQRPHIKTEQLSPS
HYSEQPHGSPAHSDSYGSYGGQACATSAAPAAAAASSFSSSQCDYTDLQSSNYYNPYPGY
ASSLYQYPYFHSSRRPYATPILNGLSIPPAHSPTANWEQPVYTTLTRP
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgctcaacatgaccgaggagcacgacaaagcgctggaggctccgtgcagccccgcgggc
accaccagctccatgtcccacgtggactcggactcggactcgccgctctcccccgccggc
tccgaggggctgggctgcgcccccgcgcccgccccgcgcccgccgggcgccgccgcgctg
ggggccaaggtggacgcggccgaggtggacgagcgcttccccgcctgcatccgcgacgcc
gtctcgcaggtgctcaagggctacgactggagcctggtgcccatgcccgtccgcggcaac
ggatcgctcaaagccaagccgcacgtcaagcggcccatgaacgccttcatggtgtgggcg
caggccgcccgcaggaagctggcggaccagtacccgcatctgcacaacgccgagctcagc
aagaccctgggcaagctctggcgtttgttgagcgaaaacgagaaacgtcccttcgtggag
gaagccgagcggctcagggtgcagcacaaaaaggatcacccggattacaaataccagccc
cggaggaggaaaagcgtcaaagccgggcagagcgactcggactcgggggctgagctcagc
caccacgccggcacgcagctctacaaggccgacacggggctggggggcatggccgactcc
caccaccacggggaccacacaggccagccccacggaccccccacgccgcccaccaccccc
aaaaccgacctgcaccacggcagcaagcaggagctgaagcacgagggccggcgcctggtg
gagagcggccgccagaacatcgacttcagcaacgtggacatctcggagctgagcagcgag
gtcatcaacaacatggagaccttcgacgtgcacgagttcgaccagtacctgcccctgaac
ggccacgcggcgctgccggccgagcacggcgccaacgccgcctcctacggcgcctcctac
gcgcactcgggcgcggccgcccaggtgtggactcacaagagcccggccgcggcctcgccg
gcggcgcccgagccgggccagcagcggcctcacatcaagacggagcagctgagccccagc
cactacagcgagcagccccacggctccccggcacactccgactcgtacggctcctacggc
ggccaggcctgcgccacctcggccgccccggccgccgccgccgcctcctccttctccagc
tcgcagtgcgactacacggacctgcagagctccaactactacaacccctaccccggctac
gcctccagcctctaccagtacccctacttccactcctcgcgccgcccctacgccaccccc
atcctcaacgggctgtccatcccgccggcgcacagccccaccgccaactgggagcagccc
gtgtacaccacgctgaccaggccttaa
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