Vidua macroura (Pin-tailed whydah): 128816154
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Entry
128816154 CDS
T11570
Symbol
LHX5
Name
(RefSeq) LIM/homeobox protein Lhx5 isoform X1
KO
K18493
LIM homeobox protein 5
Organism
vmc Vidua macroura (Pin-tailed whydah)
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vmc03000
]
128816154 (LHX5)
Transcription factors [BR:
vmc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
128816154 (LHX5)
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Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
ARM_UBR_1_2_3
Orbi_VP3
Motif
Other DBs
NCBI-GeneID:
128816154
NCBI-ProteinID:
XP_053849489
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All DBs
Position
18:10124561..10132303
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AA seq
464 aa
AA seq
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MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKCNLTEKCFSREGKLYCKNDFFRRF
GTKCAGCSQGISPSDLVRKARNKVFHLNCFTCMVCNKQLSTGEELYIIDENKFVCKEDYL
NSPSLKEGSLNSEAKLPFDFLGSCLCVRRAGPGPLLLSQPCRAPLLTPFRGLSLRPAPGA
GSCHASQWGRCCERVSSCTDRSLSPDLQDPMQDDTKETDNSTSSDKETTNNENEEQNSGT
KRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRM
KQLSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQGDYYGPGGNYDFFPH
GPPSQAQSPADSSYLQNSGPGSTPLGPLEPPLSGHHSSENQRYTDMISHPDTPSPEPGMT
GSLHPIPGEVFSGGPSPPFSMSSNSGYSGALSHPNPELSEAAVW
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgcattgtgcgggctgcgagaggccgattttggaccggttcctactgaacgtc
ttggacagggcatggcacatcaaatgcgtccagtgctgcgagtgcaagtgcaacctgacc
gagaaatgcttctccagggaagggaaactctactgcaaaaatgactttttcaggaggttt
ggtaccaaatgcgccggctgctcccaagggatctctcccagcgacctcgtccggaaagcc
cggaataaagtctttcacctgaactgtttcacctgcatggtctgcaacaagcagctctcc
acgggcgaggaactctatatcatcgacgaaaacaaatttgtttgcaaagaggattatttg
aactctcccagtttgaaggaaggcagcctcaactcagaggcaaagctcccatttgacttc
cttggaagctgtctctgcgtcaggagagcagggccaggccccctcctgctgtcccagcca
tgccgggcgcccctgctcacccccttccgtgggctctctctccgtccagcacccggggcc
ggatcctgccacgccagtcagtggggccgctgctgtgagcgagtgtcctcatgtacagac
aggagtttgtccccggatctccaggaccccatgcaggacgacaccaaggaaacggacaac
tcgacctcctcggacaaggagaccaccaacaacgagaacgaggagcagaactcgggcacc
aagcggagggggccccgcaccaccattaaagccaagcagctggaaaccctcaaagctgcc
ttcgccgccacccccaaacccactcgccacatccgggagcagctggcccaggagaccggc
ctcaacatgagagtcatccaggtgtggttccagaaccgtcggtcgaaggagcggcggatg
aagcagctgagcgcgctgggcgcccgccggcacgcgttcttccgcagcccccgcaggatg
cggcccctcggcggccgcctcgacgagtccgagatgctcggctccacgccctacacgtac
tacggagattaccaaggtgactactacgggccgggaggcaactatgactttttcccccac
gggccgccctcccaagcccagtccccggccgactccagctaccttcagaactcaggaccc
ggctccacacccctgggacccttggagccccccctaagcggacaccactcctcagaaaac
caaaggtacacggatatgatctcgcaccccgacacccccagccccgagccggggatgacc
ggctcgctgcaccccatcccgggggaggtcttcagcggggggcccagcccgcccttctcc
atgtccagcaatagcggctacagcggggctctgtcgcaccccaacccggagctcagcgag
gcggcggtgtggtag
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