Vidua macroura (Pin-tailed whydah): 128816180
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Entry
128816180 CDS
T11570
Symbol
TFIP11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
vmc Vidua macroura (Pin-tailed whydah)
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vmc03041
]
128816180 (TFIP11)
Spliceosome [BR:
vmc03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
128816180 (TFIP11)
Other components
Complex C specific factors
128816180 (TFIP11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Sec3_CC
Motif
Other DBs
NCBI-GeneID:
128816180
NCBI-ProteinID:
XP_053849556
LinkDB
All DBs
Position
18:complement(4960835..4969203)
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AA seq
827 aa
AA seq
DB search
MSMSHLYGTDGDDGVEMESFEVSDWDLQNEFNPHRQRHRQTKEEATYGVWAERDSDEERP
SFGGKRSRDYSAPVSFVSAGLRKAAAEELSDEDSDEDEKPVKQEEIPKEFVPKKLKTGGN
FKPSQKGFVGGSKSFVDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQR
KGKGAVGAYGSERTPQSLQDFPVVDSEEETEEEFQKELSQWRKDPNGGKKKPKYSYKTVE
ELKAKGRISKQLAAPQKELSQVKVIDMTGREQKVYYSYSQISHKHNIPDDSPQQPLGKDS
KPQGFALPELEHNLQLLIDITEQEIIQSDRQLQYERDMVVNLSHEIQKMAEVLSHEEKAI
SNLSKVLDMVEECERRMQPGCENPLTLDECAKIFETLQDKYYEEYRMSDRVDLAVAIVYP
LMKEYFKNWDPLKDCTYGTEIIAKWKSLLENDQLLSHSGQDLSTDAFHRLMWEIWMPYVR
NIVARWQPRNCGSMVDFLDSWVNVVPVWILDNILDQLIFPKLQKEVESWNPLTDTVPIHS
WIHPWLPLMQARLEPLYSPIRNKLANALQKWHPSDSSAKLILQPWKDVFTPGSWEAFMVK
NIVPKLGMCLNELIINPHQQHMDAFYWVIDWEGMISVSSLVGLLEKHFFPKWLQVLCSWL
SNSPNYEEITKWYLGWKSMFSDQVLAHPSIKDKFNEALDIMNRAVSSSVGGYMQPGAREN
IAYLTHTERRKDFQYEAMQERREAENMAQRGIGAAAGSVPMNFKDLIQTKAEEHNIVFMP
VIGKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcgcacctgtacggcacggacggagacgatggcgtggagatggagagcttc
gaggtgtcggactgggacctgcagaacgaattcaacccgcaccggcagcgacaccgccag
accaaggaggaggcgacctacggcgtgtgggccgagcgcgactcggacgaggagcggccc
agcttcggcgggaagcgctccagggattactcggcccccgtgagctttgtgagtgctggg
ctgaggaaggcggcggccgaggagctctcggacgaggactcggatgaggacgagaagccc
gtgaagcaggaggagattcccaaggagtttgtgcccaagaagttaaaaacaggtggaaat
ttcaagcccagccagaaaggcttcgtagggggctccaagtccttcgtggattttggcagc
tgggagagacacactaaaggaattgggcagaagcttctccagaagatgggatatgtccct
ggaaggggtctggggaagaatgctcaaggaatcatcaatcccatcgaggccaagcagagg
aaaggcaaaggtgctgtgggcgcttacggctccgagaggaccccgcagtccttgcaggac
ttccctgtggtggactcagaagaggaaactgaggaggaatttcagaaggagctcagccag
tggcggaaggacccaaatggaggcaagaaaaagcccaagtacagctacaagacagtggaa
gagctgaaagccaagggcaggatcagcaagcagcttgcagcccctcagaaggagctgtcc
caggtcaaggtgatcgacatgacgggccgggagcagaaggtttattacagctacagccag
atcagccacaagcacaacatcccagatgacagcccccagcagcccctgggcaaggactcc
aagccccagggctttgccctgcccgagctggagcacaacctgcagctgctcatcgacatc
acggagcaggagatcatccagagcgaccggcagctgcagtacgagagggacatggtggtc
aacctgagccacgagatccagaagatggctgaggtgctgtcccacgaggagaaggccatc
agcaacctcagcaaggtgctggacatggtggaggagtgtgagaggcggatgcagccgggc
tgtgagaaccctctgaccctggatgagtgtgcaaagatctttgagaccctgcaggacaag
tactacgaggagtacaggatgtcagacagggtggacctggcagtggccatagtttatcct
ctcatgaaggaatacttcaagaactgggatcccctcaaggactgtacatatggcacggag
atcatagccaagtggaagagccttctggaaaacgatcagctgttatcccacagtgggcag
gacctgtcaacagatgctttccacagactgatgtgggagatctggatgccatatgtcagg
aacatcgtggcacggtggcagccgaggaactgtggatccatggtggatttcttggatagc
tgggtgaacgttgttcctgtgtggatactggataacattctggatcagctcatctttccc
aagctgcagaaggaggtggagagctggaatcctctgacggacacggtgccgatccactcg
tggatccacccctggctgccgctgatgcaggcgcgcctggagccgctgtactcgcccatc
cgcaacaagctggccaacgccctgcagaagtggcaccccagcgactcctctgccaagctc
atccttcagccctggaaggatgtcttcactcctggctcctgggaggctttcatggtcaag
aacatcgtgcctaaactcggaatgtgtctgaatgagctcatcatcaaccctcaccagcag
cacatggatgctttttactgggtgatcgactgggaggggatgatttctgtctccagcctc
gttgggctgctggagaaacacttcttcccaaagtggctgcaggtgctctgctcttggctc
agtaacagccccaactacgaagagatcaccaagtggtacctgggctggaagtccatgttc
tcagaccaggtgctggcacatccctccatcaaggacaagttcaatgaagcccttgacatc
atgaaccgggccgtgtcctccagcgtgggtgggtacatgcagccgggcgcccgggagaac
atcgcgtacctgacgcacacggagcggcgcaaggacttccagtacgaggccatgcaggag
cggcgcgaggccgagaacatggcccagcgcggcatcggcgccgccgccggctccgtgccc
atgaacttcaaggacctcatccagaccaaggccgaggagcacaacatcgtcttcatgccc
gtcatcgggaagcggcacgagggcaagcagctctacaccttcggcaggatcgtcatctac
atcgacaggggcgtggtgttcgtgcaaggggagaagacctgggtgcccacctcgctgcag
agcctcatcgacatggccaagtga
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