Vidua macroura (Pin-tailed whydah): 128816432
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Entry
128816432 CDS
T11570
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5 isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
vmc Vidua macroura (Pin-tailed whydah)
Pathway
vmc03030
DNA replication
vmc03410
Base excision repair
vmc03420
Nucleotide excision repair
vmc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
128816432 (RFC5)
03410 Base excision repair
128816432 (RFC5)
03420 Nucleotide excision repair
128816432 (RFC5)
03430 Mismatch repair
128816432 (RFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vmc03032
]
128816432 (RFC5)
03036 Chromosome and associated proteins [BR:
vmc03036
]
128816432 (RFC5)
03400 DNA repair and recombination proteins [BR:
vmc03400
]
128816432 (RFC5)
DNA replication proteins [BR:
vmc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
128816432 (RFC5)
DNA Replication Termination Factors
ELG1-RFC complex
128816432 (RFC5)
Chromosome and associated proteins [BR:
vmc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
128816432 (RFC5)
DNA repair and recombination proteins [BR:
vmc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
128816432 (RFC5)
Check point factors
HRAD17(Rad24)-RFC complex
128816432 (RFC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_22
AAA_16
AAA_24
AAA_11
AAA_lid_RFC1
AAA_assoc_2
DEAD
nSTAND_NTPase5
AAA_14
ResIII
RuvB_N
DUF815
AAA_5
AAA_30
AAA_19
DNAX_ATPase_lid
PhoH
TniB
AAA_7
TIP49
ATPase_2
nSTAND3
AAA_25
Thioredoxin_6
IstB_IS21
AAA_28
UBA_Rad5
Motif
Other DBs
NCBI-GeneID:
128816432
NCBI-ProteinID:
XP_053850035
LinkDB
All DBs
Position
18:12600066..12602465
Genome browser
AA seq
357 aa
AA seq
DB search
MAPAGSANLPWVEKYRPQALSELVSHRDILSTVQRFISEDRLPHLLLYGPPGTGKTSTIL
ACARQLYREREFGSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFKLVILDEADAMT
QDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLQHVIQ
EEGVDVSEDGMKALVTLSSGDMRRALNILQSTSMAFGKVTEENVYTCTGHPLKSDIANIL
DWMLNQDFSTAYRKIMELKTLKGLALQDILTEIHLFVHRGEERVRLRMILERPNFPLPLT
ERFLLSTVDFPPSIRIQLLIKLADIEYRLAAGTSEKIQLSSLIAAFQVTRDLVVAEA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggcgccggcgggcagcgcgaacctgccgtgggtggagaagtaccgtccgcaggcgctg
tccgagctggtgtctcaccgggacatcctcagcaccgtgcaacgcttcatcagcgaggac
cggctcccccatctgctcctctatgggccacccggtaccgggaagacatccaccatcctg
gcctgtgcccggcagctctaccgggagcgggagttcggctccatggtgctggagctcaac
gcctccgatgaccggggcatcgacatcgtccgagggcccatcctgagcttcgccagcacc
aggaccatctttaagaaaggcttcaagctcgtcatcctggatgaagccgatgccatgacc
caggatgctcagaacgccctgaggagagtgatcgagaagttcacagaaaacacccggttc
tgcctcatctgcaactacctctccaagatcattcccgccctgcaatcccgctgcacccgc
ttccgcttcggccccctgaccccggagctgatggtgccgcggctccagcacgtcatccag
gaggagggggtggatgtgagcgaggacgggatgaaggctctggtgaccctctcgagcggg
gacatgcgcagggccctcaacatcttgcagagcacctccatggcctttgggaaggtgaca
gaggagaacgtttacacctgcacaggacatcccctcaagtctgacatcgccaacatcctc
gactggatgctgaaccaggatttttccactgcctaccgcaaaatcatggagctgaagacg
ctgaagggcctggccctgcaggacatcctcactgagatccatctcttcgtgcacagaggt
gaggaaagggtccggctccggatgatcctggagaggccaaacttccccctgcccctcact
gagcgtttccttctctccacagtcgacttccccccctccatccgcatccagctgctgatc
aagctggcagacatcgagtaccgcctggctgctggcaccagcgagaagatccagctgagc
tccctcatcgccgccttccaggtcaccagggacctggtggtggccgaagcctga
DBGET
integrated database retrieval system
