Vidua macroura (Pin-tailed whydah): 128816821
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Entry
128816821 CDS
T11570
Symbol
TRIM25
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
vmc Vidua macroura (Pin-tailed whydah)
Pathway
vmc04622
RIG-I-like receptor signaling pathway
vmc05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
128816821 (TRIM25)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
128816821 (TRIM25)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vmc04121
]
128816821 (TRIM25)
Enzymes [BR:
vmc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128816821 (TRIM25)
Ubiquitin system [BR:
vmc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128816821 (TRIM25)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRIM_CC
SPRY
PRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_3
zf-RING_2
zf-C3HC4_2
ANCHR-like_BBOX
zf-RING_5
zf-B_box
zf-RING_4
Fib_alpha
TBCA_PH
Motif
Other DBs
NCBI-GeneID:
128816821
NCBI-ProteinID:
XP_053850724
LinkDB
All DBs
Position
19:complement(9291175..9301175)
Genome browser
AA seq
637 aa
AA seq
DB search
MAALESEPGLSGLEEDLTCSICLCLFSSPVTVPCGHNFCASCLELSWAGLSGGFSCPQCR
ATFAARPQLQKNTVLCRVVEQLQGHSGAKGEEEEENEGGHGEAGGCWAGEPPVSCDSCQE
APAVQTCLTCTASFCAEHLRPHRDSPAFRDHQLCPPLRDLQLRKCPQHNRLFEFFCSKHG
VCICSLCLLGHKLCPTSPLEQAKATAQSLLKKKLVELHNQGERTARAMSTVKTKQNQSAE
TASRKKELIRNEFSEVKAVIEERENEIMKAITEEEKRVWNKFDYIYSVLGNKKNEIQSLK
DQIEMALTESDDVLFLKRAAALQQTSTKEAYVPVVEMDPNVMHSTYQSAITLKDIVKTSV
IQSREKKEEAKPLQPKIKAPPAANPNKPSVGKKPHGPHQTHKEKTAPQAQITSQGETDTT
KEKKKAAKVAPTTTPTATAAAAAKELLDSFLKKPREELLQYAANITLDYNTAHNTVVLAE
NYTRMSISDTVPGHKYHPQRFTDYRQVLGFQCFKRGVHYWEVELQKSSFCGIGVCYGSME
RQGPESRLGRNSKSWCIEWLNSKISSWHNDVEKSLPNTKATKIGVLLHCEGGLVIFMAVG
EKNNLIYKFKAQFTEALYPAFWLFSSDAVLSLCHMKA
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctggagtcggagccgggcctgtcggggctggaggaggatctcacctgctcc
atctgcctctgcctcttcagcagccccgtgacggtgccctgcgggcacaacttctgcgcc
tcctgcctggagctcagctgggccggcctctcggggggcttcagctgcccgcagtgccgg
gccaccttcgcggcccgcccgcagctgcagaagaacacggtgctgtgccgggtggtggag
cagctccagggccactccggggccaagggcgaggaagaggaggagaatgagggtgggcat
ggggaggcgggggggtgctgggcgggggagccccccgtgtcctgcgacagctgccaggag
gcgccggccgtgcagacctgcctgacctgcaccgcgtccttctgcgccgagcacctgcgg
ccgcaccgcgacagccctgccttccgcgaccaccagctctgcccgcccctgcgcgacctg
cagctgcgcaagtgcccccagcacaacaggctcttcgagttcttctgcagcaagcacggc
gtctgcatctgctccctctgcctgctcgggcacaagctgtgccccaccagccccttggag
caggcaaaagccactgcccagtcgttgctgaagaaaaaacttgtggagctgcataaccag
ggtgaaagaactgcccgggcaatgagcacggtgaaaacaaaacagaaccaatctgctgag
acagcttcaagaaagaaggaattgatcagaaatgagttttcagaagttaaagctgtaatt
gaagaaagagaaaatgagatcatgaaagcaattacagaggaagaaaagagagtttggaat
aagtttgattatatttacagtgttctgggaaataagaagaatgaaattcaatctctcaaa
gatcagattgagatggcactgactgaaagtgatgatgttctatttttgaagagagcagca
gcattgcaacaaacatcaacaaaagaggcttatgttcctgtagttgaaatggacccaaat
gtgatgcattccacttaccagtctgccattaccctcaaagacatagtgaaaacatcagta
attcagagtcgggagaaaaaagaagaagccaaaccgttgcagccaaaaattaaggcccct
ccagcagctaatccaaacaaaccgtctgttggaaaaaagcctcatggaccacaccagacc
cacaaagagaaaaccgctccccaggctcaaatcacttcgcagggggagacagataccacc
aaagagaaaaagaaagctgctaaagttgcaccaaccaccacaccaactgccacagctgct
gctgctgctaaagagctgctagacagcttcctgaagaaacccagagaggagctcttgcag
tatgctgctaacatcacgctggattacaacacggctcacaacaccgtggttctggctgaa
aactacaccaggatgtccatctcggacaccgtcccaggtcacaagtaccacccgcagcgc
ttcaccgattaccgccaggtgctgggcttccagtgcttcaagagaggcgtccactactgg
gaggtggagctgcagaagagcagcttctgcggcatcggcgtctgctacggcagcatggag
cgccagggccccgagagccgcctgggcaggaacagcaagtcctggtgcatcgagtggctc
aactccaaaatatcatcctggcacaacgacgtggaaaagagcctgcccaacacaaaggct
accaagataggggtgctgctccactgcgaggggggccttgtgattttcatggcggtgggg
gagaagaataacctgatctataaattcaaagcccagttcactgaggccttgtacccagcc
ttctggctgttttccagtgatgctgttctctctctctgtcacatgaaagcataa
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