Vidua macroura (Pin-tailed whydah): 128816847
Help
Entry
128816847 CDS
T11570
Symbol
NUP85
Name
(RefSeq) nuclear pore complex protein Nup85 isoform X1
KO
K14304
nuclear pore complex protein Nup85
Organism
vmc Vidua macroura (Pin-tailed whydah)
Pathway
vmc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128816847 (NUP85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vmc03019
]
128816847 (NUP85)
03036 Chromosome and associated proteins [BR:
vmc03036
]
128816847 (NUP85)
Messenger RNA biogenesis [BR:
vmc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128816847 (NUP85)
Chromosome and associated proteins [BR:
vmc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
128816847 (NUP85)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
128816847
NCBI-ProteinID:
XP_053850771
LinkDB
All DBs
Position
19:complement(5427662..5444214)
Genome browser
AA seq
714 aa
AA seq
DB search
MAAGPPSAPRAAPSPNRTSPSHPQHPWPPQILNLLKSPRSCWAACHSPLSAPSVPHTAFF
ARTLSQSNGQPREVVVPGADPSARQLCFAWGPAEVLVCETLFGRAGTGDGAPSSSCVFVV
RRDQDIYIQTLRKLFNESHGIFLGLQRSEEELAGKSRKAQLVQVSKNYRSVIRACMEDMH
QAAVSTRDPALQGQYSTQVSILSAMELIWNLCEILFVEAATAGPLLLRLLDWVRLHVCDV
DSMVREVLSSESPSKHKLFWNVVDVFVLQGRMDEARHLLSKEASANPTSMNMYKILDDLM
KKMPVPSLGNTQTLTELELKWQHWHEECQRYLQDGTFASNPHMESICKILLGDEDAILEK
KDLMTTWYHFLVTRLLYSHPTVRPMELRFYAQSSMDLFLGGESSPEPLDMILMAAFEFEM
HQVIKECSIVLSNWWFVAHLTDLLDHCKLLQSHNLYFGSNMREFLLLEYASGLFSHHSLW
QLGVDYFDHCLEYGRVYLELHIERIPLSTEQKALKVLRICEQRQMHEQVRSICKIMAMKA
LRNNRLGSALSWSIRAKDAAFATLISDRFLKDYCERGCFSDLDLIDNLGPSMLLSDRLTF
LGKYREFHRLYGEKRFLEAARLLLTLMTAHIAPCSFWMTLLTDALPLLEQKEVIFSAEQT
YELMRCLEDLTAGNPDKQKFQEDDIETTKVEMLRLALARNLARVIVKEGTVEGS
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgggccgccctcagcgccccgcgccgcgccctccccgaacagaacttcgcct
agccatccccagcatccttggccccctcaaatcttaaatctcctcaaatctcctcgaagc
tgctgggccgcctgccacagccccctcagtgccccttcagtgcctcacacggcgttcttt
gcacgcacgctttcccaatcgaacgggcagcccagggaagtggtggtgccgggcgcggac
ccgtcggcccggcagctctgcttcgcctggggccccgcggaggtgctggtgtgcgagacc
ctcttcggccgcgcaggtaccggggatggagcaccgagctcctcctgcgtcttcgtggtc
cgcagggaccaggatatttacatccagaccctgcggaaactcttcaacgagtcgcacggg
attttcttggggctgcagcggagcgaggaggagctggcggggaagtcgcggaaggcgcaa
ttggttcaagtgagtaaaaactaccggtcagtgataagagcctgcatggaggacatgcac
caggcagctgtttcgacccgagaccctgccctgcaaggccagtacagcactcaggtttcc
attctctctgcaatggagctgatatggaacctttgtgagattctgtttgttgaagcagct
acagctgggcccctcctgctgcgcctcttggactgggtgcggctccacgtgtgtgacgtg
gacagcatggtccgggaagttttgagcagtgagagtccatccaaacacaagctcttctgg
aacgtggtggatgtctttgtgctccaaggccggatggatgaagcgcggcacctgctctcc
aaggaagccagtgccaatcccacatccatgaacatgtacaaaatcttggatgacttgatg
aagaagatgcctgtgcccagtcttggcaatacacagacactgacagagctggagctgaag
tggcagcactggcacgaggaatgtcaacggtatctacaggatggaacttttgcttccaat
ccccacatggagtccatctgcaagatactgctgggagatgaggatgccattttggagaag
aaggatctcatgaccacctggtatcacttcctcgtcacgcggctcctgtattctcacccg
acagtgaggccgatggagctgcgtttctatgcacagtctagtatggacctgttcctgggt
ggagagagcagccctgagcctctagacatgattttaatggcagcctttgaatttgagatg
catcaagtgatcaaggaatgcagcattgtcctgagcaactggtggtttgtggctcatctg
actgacctgttggatcactgcaaactcctgcagtctcacaatctctattttggttcaaat
atgcgtgaattcctcctgctggagtatgcctcaggactcttctcccatcacagcctgtgg
cagctgggggtggattacttcgaccactgcctggagtacggccgggtgtacctggagctg
cacattgagcgcatcccactcagcacggagcagaaggccctcaaggtgctgaggatttgt
gagcagaggcagatgcatgagcaagtgcgcagcatctgtaagatcatggccatgaaggct
ctgcggaacaaccgcctgggctctgccctgtcctggagcatccgagccaaggatgcggca
tttgccaccctcatctcggaccgattccttaaggactattgtgaaagggggtgtttctct
gacctggatctcattgacaatttgggcccatccatgctgctcagtgaccggctcacattc
cttgggaagtaccgggagttccaccggctctacggggaaaagcggttcctggaggcagcg
cggctgctgctgacactgatgacggctcacatcgccccctgctccttctggatgacgctg
ctcacggatgcgctcccgctgctggagcagaaggaggtcatattttcagcagagcagaca
tacgagttgatgcgatgtctggaagacctgacagctgggaatccagacaagcagaaattc
caggaggatgacattgagacaaccaaagtggaaatgctgagacttgccctcgcacggaac
ctcgcacgagtcatcgtcaaagaaggtaccgtggaagggtcttga
DBGET
integrated database retrieval system
