Vidua macroura (Pin-tailed whydah): 128816951
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Entry
128816951 CDS
T11570
Symbol
ITGB4
Name
(RefSeq) integrin beta-4 isoform X1
KO
K06525
integrin beta 4
Organism
vmc Vidua macroura (Pin-tailed whydah)
Pathway
vmc04382
Cornified envelope formation
vmc04510
Focal adhesion
vmc04512
ECM-receptor interaction
vmc04518
Integrin signaling
vmc04810
Regulation of actin cytoskeleton
vmc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128816951 (ITGB4)
04518 Integrin signaling
128816951 (ITGB4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128816951 (ITGB4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
128816951 (ITGB4)
04810 Regulation of actin cytoskeleton
128816951 (ITGB4)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
128816951 (ITGB4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vmc04147
]
128816951 (ITGB4)
04515 Cell adhesion molecules [BR:
vmc04515
]
128816951 (ITGB4)
04090 CD molecules [BR:
vmc04090
]
128816951 (ITGB4)
Exosome [BR:
vmc04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
128816951 (ITGB4)
Exosomal proteins of bladder cancer cells
128816951 (ITGB4)
Cell adhesion molecules [BR:
vmc04515
]
Integrins
Integrin beta subunits
128816951 (ITGB4)
CD molecules [BR:
vmc04090
]
Proteins
128816951 (ITGB4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
fn3
Calx-beta
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
PSI_integrin
I-EGF_1
EGF_Teneurin
EGF_integrin
EGF_2
EGF_TEN
Fn3_PBP1
SEA
vWA_SIBA-E
Fn3_Dep-1_3rd
Motif
Other DBs
NCBI-GeneID:
128816951
NCBI-ProteinID:
XP_053850931
LinkDB
All DBs
Position
19:complement(4992660..5023524)
Genome browser
AA seq
1922 aa
AA seq
DB search
MRRKTMNVLPRACARLLLLSLLCATGVCQWSKNNRCVLSRAKSCTECIRVDKDCSFCTDE
SFEEPRCDLRENLLRSGCGEASIVYTQGEMRTLKNSSINVSLQRTQVSPQAMYMRLRAGE
EMSFNMDVFQPKESPVDLYILMDFSYSMSDDLDNLKSMGHNLADFLQALTSNYTIGFGKF
VDKVSSPQTDMRPEKLREPWHNADSPFSFKNVIRLTSNINHFSQELRKERISGNLDAPEG
GFDAILQTAVCKDKIGWRKDSTHLLVFSTESAFHYEADGTNVLAGILARNDEQCHLDSHG
TYVYDTKQDYPSVPTLVRLLGQHNIIPIFAVTNHSYSYYEKLHKYFPISEIGELQEDSSN
IVELLRTAFERIRSKMDIRADFTPKALKTEFTSLEFEKTESGSFNITRGKVSKFHMHVKA
LEYVGGQHVCSLPEKDRQGVIHVKPTSLSDSLTVSTAVICDVCPCEQQQELDSPKCSFHG
NFVCGQCICHPGWRGDTCDCSPASSPNNEACIRPGDVEPCSGRGECLCGKCQCYSEDQTL
RFDGAFCEFDVLQCPRTSGFLCNDRGRCSRGACVCESGWEGPGCECPTSNDTCIDSRGGI
CNNHGRCECGRCICDMASLYTSSTCEISYSLGFQAVCESIRDCVRCQTWGTGNLKGNCSS
CHLQIQMVEELKKEEAGEYCSFQDEDDDCTYHYTLEGDPSVLPNTTVRVQKNKECPPGSF
LWLIPLLIFLILLLGLLLLLCWKFCACCKACLALLPCCARGSDPAPGSAGRTVGFKEDHY
MLRQSLMSSDHLDTPLVRSGSLKGRDTVRWKIHNNVHKQGVTSPAATNAKDLSECPRASS
FWVGYFSDQQGRSLIWGVLFAVPYGLSLRLARLFTQNLMKPDAREFEQLRKEVEENLNEV
FKHIPGCHKVQQTKFRLQPNSGKRQDHTIVDTVLTAPYSAKPDIIKVVEKHVSHEAFNDL
KVAPGYYTVTSDQGREQSLALAPGWVQGVISHLSPLSFPPDAQGMVEFQEAVELVDVRVP
LFIRDDDDDEKQLQVEAIEVPNGIAKIGRRVVNITIIKEQASSLITFLQPAYSHSRFDKL
AKIPVLREIIDNGKSQVTYRTRDLTAKNGRDYIFTEGELVFQPGETRKEVQVPLLELTEI
DTLLNNCQLKQFAIDLLHPKYGAKIGRYPQTTVTIADPELVDGVPSMTGLAQVPQSPKGR
LSAPLNPDAHALSSREISFNWFPPPGKPLGYKVKYWIQGDPESEAHLLDVKTPSAELTNL
YPFCDYEMQVCAYNGVGEGTYSDIIHCRTLEEVPSEPGRLAFNVVSSTVTQLSWAEPAET
NGVITAYEVSYGLVNEDNVPIGPVKKVLVEDPRKRMVLIENLRESQPYRYMVKARNGAGW
GPEREATINLATQPKRPMSSECQPGQGAEGQEQGRPPHHPNCFHTSCLLCCSSHPGNAEG
QPEHCVVFCCLSIMALSTSPAVPIIPDVPIIDAEGGEDYDSYLMYSTDVLRSPAGSKRPS
VSDDSEHLMNGRVDFSFPGSGSGTLTRTANTSYHQLSSHMHQEHRVMGSSSLTRDYSTML
MGHDYPGTLLPPIHEDAGRTLLRPRDVGFRSRAKVKGYYPSIGCRDSIIMTDGSAGMCKY
IDSRKPLGIPDTPTRLVFSALGPTSLKVSWQEPRCEKEVQGYSVQYQLLNGGEVHRITIP
NPSQNSVVVEDLLPNHSYIFKVKAQSEEGWGPEREGVITIESQVDPQSPLSPVPGTPFTL
STPCAPGPLVFTALSPDSLHLSWERPREPNGPILGYRITCERLHGGGEPRTIYVEGDNLE
TTLTVPHLSENVPYKFKVQANTTQGFGPEREGLITIESQDRGAFSQFGGQQYMREVYKFP
TEYTTKTSISHSSLDPHFTDGMLVTTQRVENSSSTLTQEFVSHTVMASGTLTQQVERQFY
EA
NT seq
5769 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggaagacaatgaatgtgctgccacgggcgtgtgccaggctgctcctcctgtcc
ctgctctgcgccaccggtgtctgccaatggagcaaaaacaaccgctgtgtgctgtctcgg
gcaaagagctgcaccgagtgcatccgggtggataaggactgctccttctgcaccgacgag
agctttgaggagccgcgctgtgacctgcgggagaacctgctgcgctccggctgcggcgag
gccagcatcgtgtacacccagggagagatgaggacactgaagaattccagtatcaacgtg
tccctgcagaggacccaggtgtccccccaggccatgtacatgaggctgcgggctggcgag
gagatgagcttcaacatggatgtcttccagcccaaagagagccctgtggatctctacatc
ctcatggacttctcctactccatgtccgatgatctggacaacctcaaaagcatggggcat
aacctagcggacttcctgcaagccctgacttccaattacaccatcggatttggcaagttt
gtggacaaagtctcatcccctcagacagacatgagacccgaaaagctgcgtgagccctgg
cacaacgccgactccccgttctccttcaagaacgtcatccgcctgaccagcaacatcaac
cacttcagccaggagctccgcaaggagcgcatctccggcaacctggatgcccccgagggc
ggctttgatgccatcctgcagacagctgtttgcaaggataagattggctggagaaaggac
agcactcacctgctcgtgttctccaccgagtctgcctttcactatgaagctgatggtacc
aacgtcctggcagggatcctggcgaggaatgacgagcagtgtcacctggacagccacggc
acctacgtgtatgacaccaagcaggactatccttcagtgcccaccctcgtgcgcctcttg
ggccagcacaacatcatccccatctttgctgtcaccaaccactcctacagctactacgag
aagctgcacaagtatttccccatctccgagatcggggagctccaggaagactcttccaac
atcgtggagttgctccgcacagcctttgagcgcatccgctccaagatggacatccgggct
gacttcacccccaaagccctgaagacagagttcacctccctggaatttgaaaagacagaa
tctggctccttcaacatcacccgtggaaaagtgagcaagttccacatgcacgtgaaggct
ctggagtacgttggtgggcagcatgtctgcagcctccccgagaaggaccggcaaggagtc
atccatgtgaaacccacgtccctgagcgacagcctcacggtgtcaactgctgtcatctgc
gacgtgtgtccctgtgaacagcaacaagagctggactcgcccaagtgtagtttccatggg
aactttgtgtgtggacagtgcatctgccacccgggctggcgaggggacacgtgcgactgc
tccccggcctcatcccccaacaacgaagcctgcatccgccccggggacgtggagccgtgc
tcgggacggggcgagtgcctgtgcgggaagtgccagtgctactccgaggatcagaccctg
cgcttcgacggcgccttctgcgagttcgacgtcctgcagtgcccgcgcacctccggcttc
ctctgcaacgatcgtggccgctgctccaggggtgcctgcgtgtgcgagagcggctgggag
ggcccgggctgtgaatgtcccaccagcaacgacacctgcatcgatagccgagggggcatt
tgcaataaccacgggaggtgtgaatgtggcagatgcatctgtgacatggcctcgctgtac
accagctccacctgtgaaatcagctactctctgggcttccaggctgtgtgtgagagcatc
cgggactgtgtccgctgccagacctgggggacaggcaacctgaaagggaactgcagctcc
tgccacctccagatccagatggtggaggagctgaagaaagaggaggctggcgagtactgc
tccttccaggatgaggatgatgactgcacctaccattacaccctggagggagaccccagt
gtcctccccaacaccactgtccgtgtgcagaagaataaagagtgcccgcctgggagcttc
ctctggctcatcccactgctcatcttcctcatcctgctcctggggctgctgctcctgctc
tgctggaagttctgtgcctgttgcaaggcttgcctggccctgcttccctgctgcgcacga
ggctctgaccccgcccctggctctgcaggtcgcaccgttggcttcaaggaggaccactac
atgctccgccagagcctcatgtcctccgaccacctggacacgcccctggtgcgcagcggc
tccctcaagggtcgggacacggtccgctggaagatccacaacaatgtccacaagcagggc
gtcacctcccccgctgccaccaacgccaaggacctcagtgagtgtccccgtgcttccagc
ttctgggtgggttatttctctgaccaacaaggacggagtttgatttggggggttctcttt
gcagttccttacgggctgtccctgaggctggcccggcttttcacgcagaacttgatgaaa
ccggacgcccgggagttcgagcagctgcgcaaggaagtggaggagaacctgaacgaggtt
ttcaagcacattcctggctgccacaaggtccagcagaccaagttcaggttacagcctaat
tctgggaaaaggcaggatcacaccattgtggacacagtgctcactgccccttactcagcc
aagccagacatcatcaaagtggtggaaaaacatgtttcccacgaagccttcaatgacctg
aaagttgcaccgggttattacactgtgacctcagaccaaggtagggagcagagcctggca
ctggctcctggctgggtacagggggttatttctcacctctcacccttgtcttttccccca
gatgctcagggaatggtggagttccaagaggccgtggagctggtggacgtccgtgtccca
ctcttcatcagggacgatgatgatgatgagaagcagctgcaggtggaggccatcgaggtc
cccaatggcattgcaaagattgggcgcagggttgtcaacatcaccatcatcaaagaacaa
gccagcagcctcatcaccttcctgcagccagcctattcccacagccgctttgataagctg
gccaagatccctgtcctcagggagatcatagacaacgggaaatcccaagtcacctacagg
acccgggatctcacggccaagaatggcagggactacatcttcacggaaggtgagctggtc
ttccagcctggggagacccgaaaggaggtgcaggtgcccttgctggagctgacagagata
gacactctcctcaacaactgccagctcaagcaatttgctatcgacctccttcaccccaag
tacggcgccaagattggtcgctacccccagaccacggtgaccattgctgacccagagctg
gtggatggtgtcccctcgatgactggcctggcccaggtcccccagtcccccaaaggccgc
ctgagtgcaccgcttaatcccgatgcccatgctctcagctccagggaaatcagcttcaac
tggtttcctccaccaggaaaacccctggggtacaaggtgaaatactggatccagggggac
cctgagtcagaagcccatctccttgatgtcaaaaccccatcagcagagctgacaaacctt
tacccgttctgtgactatgagatgcaagtctgtgcctacaacggcgtgggagaagggact
tactcggacatcatccactgccgcacgctggaggaggtgcccagcgagcccgggcgcttg
gctttcaacgtcgtgtcttccaccgtgacccagctgagctgggccgagcctgcagaaacc
aacggggtgatcacagcctacgaagtcagctatgggcttgtcaatgaggacaacgtaccc
attgggcccgtgaagaaggtgctggttgaagaccccaggaagcgcatggtgctgatcgag
aacctgcgcgagtcgcagccctaccgctacatggtgaaggccaggaacggcgcgggctgg
gggcccgagagagaagccaccatcaacctcgccacacagcccaaacgccccatgtccagt
gagtgccagcctgggcagggggcagagggacaggagcaggggagacctccccatcacccc
aactgcttccacacctcctgtttgctctgctgctccagccatcctgggaatgctgagggc
cagcctgagcattgtgtagttttttgctgcttgtctataatggcactttccacctctcct
gcagtccccatcatccctgatgtccccatcattgatgcagagggaggtgaggactatgac
agctacctgatgtacagcacagacgtgctccgctctccggccggcagcaagaggcccagt
gtctctgatgattcagagcacttgatgaatggccgagtggacttctccttccccggcagt
ggcagtggcaccttgaccaggacagccaacaccagttaccaccagctgagctcccacatg
caccaggagcacagggtgatgggcagctcctcactgacaagagattactccacaatgctg
atggggcacgattacccggggacactcctccctcccatccatgaagatgctgggaggaca
ctcctccggccccgggacgtgggtttcaggagcagggcaaaggtgaagggttactacccc
agcattggctgccgggactctataatcatgactgatgggtccgcagggatgtgcaagtac
atagactcaaggaagccactgggcatccccgacacccccacccggctggtgttctctgcc
ctgggccccacatccctgaaggtgagctggcaggagccgcgctgcgagaaggaggtgcag
ggctacagcgtgcagtaccagctcctcaacggaggagaggtgcacaggatcaccatcccc
aaccccagccagaactcagtggtggtggaggacctgctgcccaaccactcctacatcttc
aaggtgaaggcgcagagcgaggagggctggggccccgagagggagggagtcatcaccatc
gagtcccaggtggacccgcagagcccgctcagtcccgtgccaggcacccccttcaccctg
agcaccccctgtgcccctggaccactggttttcactgccctcagcccggattctctgcac
ctcagctgggagagaccccgcgagcccaatgggcccatcctgggctacaggatcacctgt
gagaggctgcatggaggaggggagcccagaacaatctatgttgaaggagacaacctggaa
accaccctgactgtgccccacctgagtgagaatgtcccgtacaagttcaaagtgcaagcc
aacaccacccaaggcttcgggccagagagagaaggcctcatcaccattgaatctcaggac
agaggtgctttctcccagtttggaggacagcagtacatgcgagaagtttacaaattcccc
actgaatacaccaccaaaaccagcatcagccattcctctctggatccccacttcacagac
gggatgctggtgaccacccagcgcgtggagaactccagcagcaccctcacccaggagttt
gtgagccacacggtgatggccagcgggaccctcacccagcaggtggagaggcagttctac
gaggcctga
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integrated database retrieval system
