KEGG   Vidua macroura (Pin-tailed whydah): 128818127
Entry
128818127         CDS       T11570                                 
Symbol
VPS11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog isoform X1
  KO
K20179  vacuolar protein sorting-associated protein 11
Organism
vmc  Vidua macroura (Pin-tailed whydah)
Pathway
vmc04140  Autophagy - animal
vmc04142  Lysosome biogenesis
vmc04148  Efferocytosis
vmc05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:vmc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    128818127 (VPS11)
   04140 Autophagy - animal
    128818127 (VPS11)
   04148 Efferocytosis
    128818127 (VPS11)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    128818127 (VPS11)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:vmc04131]
    128818127 (VPS11)
Membrane trafficking [BR:vmc04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    128818127 (VPS11)
   Hops complex
    128818127 (VPS11)
SSDB
Motif
Pfam: PEP5_VPS11_N TPR_PEP5_VPS11 VPS11_N VPS11_C VPS18_solenoid_2nd zf-C3HC4_2 zf-RING_2 zf-C3HC4 zf-rbx1 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR3_1st zf-C3H2C3 zf-RING_5 TPR_GEMI5 zf-RING_UBOX Beta-prop_IFT122_1st zf-RING_11 zf-ANAPC11 zf_RING_Vps8_fungal zf-C3HC4_3 zf-RING-like
Other DBs
NCBI-GeneID: 128818127
NCBI-ProteinID: XP_053853175
LinkDB
Position
22:complement(196190..206362)
AA seq 885 aa
MCLNCDLNMEGQIWFLPRSLQLSSFQAYKLRVTHLYQLKQHSILVSIGEDEEGINPLVKV
WNLEKRDGGNPLCTRIFPAIPGNKPTVVSCLTVHENLNFMAIGFADGSVVLTKGDITRDR
HSKTQILHEGSYPVTGLAFRQSGKTTHLFVVTTENIQSYMLSVKDYPHLELDTHGCGLRC
SSLSDPSQDLQFIVAGNECVYLYQPDERGPCFAFEGQKLIVHWYRGYLIIVSKDRKTSPK
SEFAGNEAQNSDKQVLNIYDLCNKFIAYSAIFDDIVDVLAEWGSLYVLTRDGKIHALQEK
DTQTKLEMLFRKNLFEMAINLAKSHHLDSDGLSEIFRQYGDHLYNKGNHDGAIQQYIRTI
GKLEPSYVIRKFLDAQRIHNLTAYLQMLHLQSLANADHTTLLLNCYTKLKDSSKLEEFIK
TSESEVHFDVETAIKVLRQAGYYSHAVYLAEKHEHHEWYLKIQLEDIKNYQEALHYIGKL
PFEQAESNMKRYGKILMHHVPNETTELLKILCTDYRPLGGNEGPGMLEGKKANSEEFIPI
FANNSRELKAFLEHMTEVQADSPQGVYDTLLELRLQNWAHEQDEQTKEKLHNEALTLLKS
GRFKTVFDKALVLCQMHNFKDGVLYLYEQGKLFQQIMHYHMQNEQYKKVIEVCELYGNQE
ACLWEQALSYFARKEENCKEYIAAVLKHIENKNLMPPLLVVQTLAHNSTATLSVIKDYLV
NKLQKQSHQIEQDEQRIQKYREETTRIRLEIEELKASPKIFQKTKCSICTSALELPSVHF
LCGHSFHQHCFESYSESDSECPTCMPENRKVMDMIRAQEQKRDLHDQFQHQLKCSNDGFS
VVADYFGRGVFNKLTLITDLPSGKTATTIEAGLQRELLIHTKRST
NT seq 2658 nt   +upstreamnt  +downstreamnt
atgtgccttaactgtgatctaaatatggaaggtcagatttggtttttgcctcgctccctt
caactcagcagtttccaagcttacaagctcagggtgacgcatctgtaccagctgaagcag
cacagtatcctggtttctattggtgaggatgaagagggtataaaccctttggtgaaagtc
tggaacctggagaaacgagatggtggtaatcctctttgcacacgaatttttccagcaata
ccaggtaacaagcccacggttgtatcctgcctgactgtccacgagaatcttaatttcatg
gctattggttttgcagatgggagtgttgtacttactaaaggagacatcactcgagatcgg
catagtaagacccagatcctacatgaaggtagctaccccgttactggccttgcttttcga
cagtctggcaaaacaacacatctatttgtggtgacaacagagaacatccagtcttatatg
ctttcagtgaaagactatcctcacctggagctggacactcacggttgtggattgcgctgt
tcatctctcagtgacccctcccaggatctgcagttcattgtggcaggaaatgaatgtgtg
tacctttaccaaccagacgaacgtggcccctgctttgccttcgagggacaaaagctgatt
gttcactggtatcgggggtacctcatcattgtctccaaggaccgaaagacttccccaaag
tcagaatttgctgggaatgaggcacagaattcagacaaacaagtcctgaatatctatgac
ttgtgcaacaaattcattgcatacagcgcaatctttgatgatatagtggatgtcttggca
gagtggggatctctctatgtactgaccagagacgggaagatccatgcactgcaggagaag
gatacacaaaccaaactcgagatgctgttcagaaagaacttatttgaaatggccattaac
ctggccaagagccaccacttggacagcgatggtttgtcagagattttccggcagtatggc
gatcatctctataacaagggaaaccacgatggagccatccagcagtatatccgaactata
gggaagctagaaccatcttatgttattcggaaattcctggatgctcagcgtatccacaac
cttactgcttatctacagatgctccatctgcagtccctggccaatgcagaccacactaca
cttctgctgaattgctataccaaactcaaagacagctccaaactggaagagttcattaag
acgagtgagagtgaggtccactttgatgtggaaacggctatcaaggtgcttcgccaagct
ggttactactcccatgctgtgtacctggcagagaagcatgagcatcatgaatggtacctc
aaaatccagttagaggacatcaagaactaccaagaggctttgcactacattggaaaactg
ccctttgaacaggcagagagtaacatgaagcgatatggtaaaatcctcatgcaccatgtc
cctaacgagaccactgaattgctgaagatcctttgcactgattaccgtcccttgggaggt
aatgaaggccctgggatgctagaaggaaaaaaggctaattcagaggagttcatcccaatc
tttgcaaacaattcccgagaactgaaagcttttctggagcacatgactgaggtgcaggct
gactctccacagggtgtctatgacactttattggaacttcgattgcagaactgggcacat
gaacaagatgagcagaccaaggaaaagttgcacaatgaagccctcaccctcctcaagagt
ggaaggttcaagacagtctttgataaggccttggtcttatgtcagatgcacaatttcaag
gatggtgttctctacctctatgagcagggcaaacttttccagcagatcatgcactaccac
atgcagaatgagcagtacaagaaggtgattgaggtgtgcgagttgtatggcaaccaagag
gcttgtctctgggaacaggctcttagctactttgcacggaaggaggagaactgcaaggag
tatattgctgcagtgctgaaacacatcgagaacaagaatcttatgcctccactgcttgtt
gtgcagactctggctcataactccacagccaccctgtctgtgattaaggattatcttgtc
aacaagctgcagaagcaaagccaccagatagagcaggatgagcagagaattcagaagtac
cgagaagaaactacgaggatccgcctggaaattgaagagctaaaagcaagtcccaagatt
tttcagaagaccaagtgtagcatttgcaccagtgcattggagctcccttcagtccacttc
ctgtgcggtcattcctttcaccagcactgctttgaaagctactctgagagtgattcagaa
tgtcctacttgcatgccagaaaatcgcaaagtgatggacatgatccgagcccaagagcag
aagagagatctgcatgaccagtttcagcatcagctcaagtgttcaaatgatggcttctca
gtcgttgctgactactttggtcgcggcgtcttcaataagctcaccctgatcacggacttg
ccctcgggaaagaccgcaacaacgatcgaggctggcctgcagcgggagctgctcatccac
accaagcggagtacctga

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