Vidua macroura (Pin-tailed whydah): 128818207
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Entry
128818207 CDS
T11570
Symbol
CLSTN1
Name
(RefSeq) calsyntenin-1 isoform X1
KO
K22659
calsyntenin 1
Organism
vmc Vidua macroura (Pin-tailed whydah)
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
vmc04515
]
128818207 (CLSTN1)
Cell adhesion molecules [BR:
vmc04515
]
Cadherins
Cadherin related
128818207 (CLSTN1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
CLSTN_C
Ig_CLSTN
Cadherin
Laminin_G_3
CDC45
Laminin_G_2
Glyco_hydro_16
Toxin_R_bind_N
EphA2_TM
V_ATPase_I
Cadherin_C_2
PFF1_TM
SID-1_RNA_chan
Zip
Neur_chan_memb
Piezo_TM1-24
Motif
Other DBs
NCBI-GeneID:
128818207
NCBI-ProteinID:
XP_053853297
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All DBs
Position
23:complement(7901094..7931213)
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AA seq
970 aa
AA seq
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MPAPAARLLLAALLCGAAAAARVNKHKPWIETTYHGIVTENDNTVLLDPPLIALDKDAPL
RFAESFEVTVTKEGEICGFKIHGQNVPFEAVVVDKSTGEGIIRSKEKLDCELQKDYTFTI
QAYDCGKGPDGANAKKSHKATVHIQVNDVNEYAPVFKEKSYKATAIEGKRYDNILKVEAV
DADCSPQFSQICSYEIVTPDVPFAIDKDGYIKNTEKLSYGKEHQYKLTVTAYDCGKKRAA
EDVLVKISIKPTCKPGWQGWSKRIEYEPGTGSLALFPGMHLETCDEPITSVEATVELETN
HIGKGCDRDTYSEKSIHRLCGAASGTAELLPPPSSAANWTVGLPTDNGHDSDQVFEFNGT
QAVKIPDGVVTVNLKEPFMISVWMRHGPGTKEKETILCNSDKTDMNRHHYTLYVHNCRLV
FLFRQDPSEGKTYKPAEFHWKLNQVCDKEWHHYVVNVEFPAVSLYVDGVSYDPFPVTEDY
PLHPSKIETQLVVGACWQEYTGSENDNETVPETSAGGELRMAQFFRGNLAGLMIRSGKLE
NKKVIDCLYTCKEGLDLQMADGVGKGVKIHMNPSQSTLTIEGDDIDRVDKAMQHISYLNS
RQFPTPGIRRLKITSTVKCFNEEACVSIPSVEGYVMVLQPEEPKISLSGINHFARSASEF
ESSEGVSLFPELRIISTITREVEPEGDGDEDPTVQESLVSEEIMHNLDMCEVTVLGEELN
QEQESLEIDMTRLQQKGIEMSSSNLGMIITGVDTMANYEEVLHLIRYRNWRTAALFDRKF
KLLCSELNGRYVSNEFQVEVNVIHTASPVEHANHIAAQPQFIHPVHHSFVDLSGHNLANP
HPFSVVPSTATVVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQDTGKESEMDWDDSALTI
TVNPMETYEDQHSSEEEEEEEEEESEDGEEDDITSAESESSEEEEGEQEEDQQNVNRQQQ
LEWDDSTLSY
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgccggcccccgccgcccgcctgctgctcgccgcgctgctctgcggagcggccgcggcc
gctcgagttaacaagcataagccatggattgaaacaacctatcatggcatagttacagaa
aatgacaacacagtgctcttggacccccctctaatagccctggacaaagatgcacctctg
cgttttgcagagagttttgaggtgacagtcaccaaagaaggtgagatttgtggatttaaa
atccacgggcaaaatgttccctttgaagcagtggtagtggataaatccactggtgaggga
ataatacgctctaaggaaaagcttgactgtgagctgcagaaggactacacgttcaccatc
caggcctacgactgtgggaagggaccagatggagcaaacgcaaaaaaatcccacaaggcc
acagtccacatccaggtgaacgacgtgaacgagtacgccccggtgttcaaggagaagtcc
tacaaggccacggccatcgagggcaagaggtacgacaacatcctcaaggtggaggccgtg
gatgcagattgctccccccagttcagccagatctgcagctacgagatcgtgaccccggat
gtgccctttgccatcgacaaagacggttatataaaaaacacagaaaagttaagctatggt
aaagaacaccagtataaactgacagtaacagcctatgactgtgggaagaagagagctgct
gaggatgtgttggttaaaattagcattaagcctacgtgcaagcctggctggcaaggttgg
agcaaaagaatagaatacgagcctggcactggttctttggctctgttccctgggatgcat
ttggagacatgtgatgagccaataacctcagtggaagcaacagtggaactagaaaccaac
catattggtaaaggctgtgatagagacacctactctgagaaatccatccacaggctctgt
ggtgctgcttctggcacagctgagctgctcccccctccaagcagtgctgctaactggact
gtggggctgcccacggacaatggccacgacagcgaccaggtcttcgagtttaatggcaca
caggctgtgaagattccagatggtgttgtcacagtcaatctgaaagagcccttcatgatt
tcagtatggatgaggcacgggcccggaaccaaagagaaagagacaattctgtgcaattca
gacaagacagatatgaaccggcaccactacaccctctacgtgcacaactgccgcctggtc
ttcctgttccgccaggatccctctgagggaaagacctacaaacccgccgagttccactgg
aagctcaatcaggtgtgtgacaaagagtggcaccactacgttgtcaacgttgaatttccc
gcggtgtctctttacgtggatggggtttcctatgatcctttcccagtcactgaggattac
ccactccacccttccaagatagaaacacagctggtggttggagcatgttggcaagaatat
acaggaagtgaaaatgacaatgaaactgtgcccgagacctctgcaggtggtgaactgcgc
atggctcagtttttccgaggcaatctggcagggctgatgatccgttctggtaaactggag
aacaagaaggtgattgattgcctctacacctgcaaagaggggctggatttgcagatggct
gatggtgttggcaaaggtgtgaagatccacatgaacccgagccagtcaacgctgaccata
gaaggggatgacattgacagagttgacaaggccatgcagcacatttcctacctgaactcc
cgccagttcccaacacctggcattcggaggctgaagatcaccagcactgtcaagtgtttc
aatgaagaggcctgtgtctccattccctctgtggaggggtatgtcatggtcttgcagcca
gaggagccaaaaatcagcctgagtggcatcaaccactttgcccgctctgcctcagagttt
gagagctccgagggcgtttccctcttcccggagcttcgcatcatcagcaccatcacccgg
gaggtggagcccgagggagatggggatgaggatcctacagtccaagagtctttggtatct
gaagagatcatgcacaacctggatatgtgtgaggtgacagtgctgggagaggaactaaat
caggaacaagagagcctggagattgacatgacacgattgcagcagaaaggcattgagatg
agcagttccaacctgggcatgataatcacaggggtggacaccatggctaactacgaggag
gttctgcacctgatccgctacaggaactggcgcacggcggctctgttcgacaggaagttc
aaactgctctgctccgagctcaacgggcgctacgtcagcaacgagttccaggtggaggtg
aatgttatccacacagccagcccagtggaacatgccaatcacattgctgcacagccacag
ttcattcacccagtgcatcattcctttgttgatctctctggtcacaacttggcaaaccct
catcccttttcagtcgtccccagcacagccaccgtggtgattgtggtgtgtgtcagcttc
ctggtgttcatgatcatcctgggcgtgttccggatccgcgccgcgcaccagagaaccatg
cgggaccaggacacgggcaaggagagcgagatggactgggacgactctgctctgaccatc
actgtgaaccccatggagacttatgaggatcaacacagcagtgaagaggaggaggaggag
gaggaagaagaaagtgaagacggagaagaagatgacatcactagtgcagagtctgaaagc
agtgaggaggaagagggagagcaggaggaggaccaacagaatgttaacagacagcagcag
ctggaatgggatgactctaccctcagttattga
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