Vidua macroura (Pin-tailed whydah): 128818224
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Entry
128818224 CDS
T11570
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
vmc Vidua macroura (Pin-tailed whydah)
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vmc03036
]
128818224 (CHD5)
Chromosome and associated proteins [BR:
vmc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
128818224 (CHD5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_CHD1_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
128818224
NCBI-ProteinID:
XP_053853320
LinkDB
All DBs
Position
23:4665611..4689198
Genome browser
AA seq
1958 aa
AA seq
DB search
MRGPAAARELLDDADNEEDVSEEDDGVLEGLDEFFAEDQVVVQKKKKSKKLKDGKAAKIK
RRKKEGSNDEMSENEEEIEEKSESEGSDYSPNKKKKKKLKDKKEKKPKRKKKDEEEDDNE
DGSLKEPKSSAQLMEEWGLDDVDYVFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIPMSKM
MTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVTIAPALPASPQHSALPTVIRKAKT
KEGKGPGVRKKIKGSKDGKKKGKGKKMAGLKFRFGGIPSKRKKGSSSEEEEREESDFDSA
SINSSSMRSECSAGLGKRGKKRKKKKRTEEGDGYETDHQDYCEVCQQGGEIILCDTCPRA
YHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKEEEEEEEDGGEEEEDDHMEFCRVCKDG
GELLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWAWKEPPAAPL
PPVLPAADPQLVLPPPKVLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQR
KNDMDEPPAFDYGSGDEDNQREKRKNKDPQYAKMEERFYRYGIKPEWMMIHRILNHSFDK
KGDIHYLIKWKDLPYDQCTWEIDDIDIPYYENLKLLYWNHRELMLGEDTRPLKKLNKKGK
KLKEEKLEKPPETPLVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILA
DEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDK
ESRSVIRENEFSFEDNAIRSGKKVFRMKKEAQIKFHVLLTSYELITIDQAVLGSIEWACL
VVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGF
LEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFIL
TRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPMLPNGSYDGNSLVKSSG
KLMLLQKMLKKLRDGGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAID
RFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVM
IYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDD
VEGMVSQGQRIAMPDAVTPFSDALSTKGGAATPGMKKKHGSTPPGDNKDVDDSSVIHYDD
AAISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDY
WEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDTSQEDQEWQDELSDNQSEYSIGSEDE
DEDFEERPEGQSGRRQSRRQLKTDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRW
GMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQH
VLTRIGVMSLVRKKVQEFEHVNGKYSTPDLLLEGPESKRSSEVVSSDPNTPVPASPAHTH
TVLGALADKTEAQLGFHEEKEPVEQKPRKVSDSQVPASAEEEREEHLESCDSKERPRKEK
QEDCEKAEPPSEPLVKGLFPPADEGIQEQEKPLEKAELSSSPGKGEDKEVKPEDGKEEEK
EPSDAQQNGDKEEEEEGKKDDRNMNFRFMFNIADGGFTELHTLWQNEERAAMSSGKIYDI
WHRRHDYWLLAGIVTHGYARWQDIQNDPRYVILNEPFKSEIHKGNYLEMKNKFLARRFKL
LEQALVIEEQLRRAAYLNMTQDPSHPAMALNARLAEVECLAESHQHLSKESLAGNKPANA
VLHKVLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLATRGGDPAAQGS
FGSAPIFNNNFGPNFRGPGPGGIVNYSQMPLGPYVTDI
NT seq
5877 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcccggcggccgcccgggagctgctggacgacgcggacaacgaggaggacgtg
tcggaagaagatgatggggtgctggaaggattggatgagttttttgcagaagaccaagtt
gtggtacagaaaaagaagaaatccaagaagctgaaagatggcaaggctgccaaaatcaag
aggaggaagaaggaggggagcaatgatgagatgtcagaaaatgaagaggagatcgaggag
aaatcagaaagcgaagggagtgactattctcccaacaaaaagaagaagaaaaaactgaaa
gacaagaaggagaaaaagccaaaacggaagaagaaggatgaagaggaggatgacaatgag
gatggaagtttaaaggagcccaagagctcagcccagctcatggaggaatggggtctcgat
gacgtagattatgttttctcagaagaggattaccatactctgacgaattacaaggctttc
agccagttcctcaggcctctgattgccaagaagaaccccaagatccccatgtccaagatg
atgacggtgctcggtgccaagtggcgagagttcagtgccaacaaccccttcaagggcagc
tcggcggcggcggctgcggccgctgtggctgcagctgtggagactgtcaccatcgccccg
gcgctccccgccagcccccagcactctgccctgcccactgtcatcaggaaggccaagacc
aaggagggcaagggtccaggtgtacggaagaaaatcaagggctccaaagacgggaagaaa
aaggggaaagggaaaaagatggcaggcttgaaatttcggtttggaggaatccccagcaaa
aggaaaaagggctcctctagtgaagaggaggaacgggaagaatccgactttgacagcgcc
agcatcaacagctcctccatgcgctctgagtgctcggctggcctggggaagagagggaag
aagaggaaaaagaaaaagaggactgaagagggggacgggtacgagaccgaccaccaggac
tactgcgaggtgtgccagcagggcggggagatcatcctgtgcgacacctgcccccgcgcc
taccacctggtctgcctggaccccgagctggagaaggcccccgagggcaagtggagctgc
ccccactgtgagaaggagggcatccagtgggagccgaaggaggaggaggaggaggaggag
gatggtggcgaggaggaggaggatgaccacatggagttctgccgggtgtgtaaggacgga
ggggagctgctgtgctgcgacacctgcccgtcctcctaccaccttcactgcctgaacccg
ccgctgccggagataccaaacggtgaatggctctgcccacgctgtacatgccctcccttg
aagggcaaagtgcagcgcatcctgcactgggcctggaaggagccgccggccgccccgctg
ccgcccgtgctgcccgccgcggacccgcagctggttctgcccccgcccaaggtgctggag
ggcatcccggagcgcgagttctttgtgaagtgggctggcctctcctactggcactgctcc
tgggtcaaggagctgcagctggagctctaccacaccgtgatgtaccgcaactaccagcgg
aagaacgacatggatgagccaccggcctttgactacggctctggggacgaggacaaccag
agggagaagaggaagaacaaggacccccagtatgccaagatggaggagcggttctaccgc
tatggcatcaaacccgagtggatgatgatccaccgcatcctgaaccacagttttgataaa
aagggagacatccattacctgatcaagtggaaggacctgccctatgaccagtgcacctgg
gagattgatgacatagacatcccctactatgagaacctcaaactcctctactggaaccac
agggagctgatgctgggggaggacacgcgccctctgaagaagctgaacaagaaagggaaa
aagctgaaagaggagaagctggaaaagcctccagaaacacctcttgtggatcctacggtg
aagttcgacaagcagccgtggtacattgatgccacggggggcacgctgcacccttaccag
ctggaagggctgaactggctgagattctcctgggcacaagggacagatacaatcctggct
gatgagatggggctggggaagacggtgcagactatcgtgttcttgtactccctgtacaag
gagggccactcgaaagggccgtacctagtcagtgcccccctctccaccatcatcaactgg
gagcgtgagtttgagatgtgggcacctgacttctacgttgtgacctacacgggggacaag
gagagccggtcggtcatccgggaaaatgagttctcttttgaagacaacgccatccggagt
gggaagaaagtcttccggatgaagaaggaagcccagatcaagttccatgtcttgctcacg
tcctatgagctgatcaccattgaccaggcagtgctgggctccatagagtgggcctgtctg
gtggtggatgaagcacacaggctgaagaacaaccagtccaaattctttagagtactgaat
agctacaagatcgattacaagctgcttctcacagggactccgctccagaacaacttggaa
gagctcttccacctgctcaatttcctgactccagagaggtttaacaacctggaggggttc
ctggaggagtttgcagacatctccaaggaggaccagatcaaaaagctccatgacctgctg
ggtccccacatgctgcggcggctcaaggccgacgtcttcaagaacatgccggccaagacg
gagctgatcgtgcgcgtggagctgagccagatgcagaagaagtactacaaattcatactg
acaaggaactttgaagccctgaattcgaaaggtggtgggaaccaggtctcactgctcaac
atcatgatggacctgaagaagtgctgcaatcacccgtacctgttccctgtggcagctgtg
gaggcccctatgctgcccaatggatcttatgatgggaattctttggtcaaatcttctggg
aaactgatgctgctccaaaagatgctgaagaagttacgggatgggggtcacagagttctg
atcttctcgcagatgacaaagatgctggatttgctggaggatttcctggagtacgaaggc
tacaagtacgagcgcattgacgggggcatcaccggcggcctgcgccaggaggccatcgac
aggttcaatgctcctggggctcagcagttctgcttcctcctctccacccgcgccggtggt
ctgggcataaaccttgctacggccgacactgtcattatttatgattctgactggaatccc
cacaatgacatccaggcgttcagcagagctcaccgcatcgggcagaacaagaaggtgatg
atttaccgcttcgtgaccagggcctctgtggaggagcgcatcacccaggtggccaaaagg
aagatgatgctcacccacctggtggtccgcccggggctcggctccaagtcgggctccatg
accaaacaagagctggatgacatcctcaagttcgggacagaagaactcttcaaggatgat
gtggagggcatggtgtctcagggacagcggattgcaatgccggatgctgttacccctttc
tcggacgcactgtcaacaaaagggggtgcagcaacccccggcatgaaaaaaaaacatggc
agcaccccaccaggtgacaataaggatgtagatgacagcagtgtgatccactacgatgac
gctgccatctctaagcttttggaccgaaaccaggatgcgactgacgacacggagctgcag
aacatgaatgagtatctcagctcctttaaagtggctcagtatgttgtgagagaagaggac
ggtgtggaggaggtggaacgggagatcatcaagcaagaggagaatgtggaccctgactac
tgggagaagctgctgcggcaccattatgaacagcagcaggaagatctggccaggaacctg
gggaaagggaagagaatccgcaagcaggtcaactacaatgacacctctcaggaggaccaa
gagtggcaggatgagctctctgacaaccagtcagagtattccattggctctgaggatgag
gatgaagactttgaagagaggccagaaggccagagtggcagaagacaatcacggagacaa
ctgaagactgacagagacaaacctctccctcctttgctggcaagagttggggggaacatc
gaggttctgggcttcaacgcccggcagcgcaaagcattcctgaatgccatcatgcgctgg
ggaatgccaccccaggatgccttcaactcccactggctggtccgggatctgcgagggaag
agcgagaaggagttcagggcatacgtgtctctcttcatgagacatttgtgtgagcccggg
gctgatggtgctgaaacctttgcggacggcgttccccgggaagggctgtctcgccagcac
gtgctgactcgcattggggtcatgtcactagtaaggaagaaggtccaggagttcgagcat
gtcaatgggaagtacagcaccccagacctgcttcttgagggcccagagagcaagagatcc
agcgaggttgtgtcttcagatcccaacacacctgtcccggccagtccagcacacacacac
acagtactaggggctcttgcagataaaacagaagcacaattggggttccatgaggaaaag
gagccggtggagcagaagcccagaaaggtgtccgacagccaggtacctgcaagtgccgag
gaggagagagaagagcacctggaaagctgtgacagcaaggagaggccaaggaaagagaag
caagaggattgtgaaaaggctgagcctccttctgagcccctggtgaaaggcctgttccct
cccgcagatgaggggattcaagagcaagagaagcctttggagaaggcggagttgagcagc
agcccggggaagggggaggataaagaagtcaaaccagaggatggcaaggaggaggagaag
gaaccaagtgatgcccagcaaaacggtgacaaagaggaagaggaggagggaaagaaggat
gacagaaacatgaacttcagattcatgttcaacattgctgatggtggcttcacagagctg
cacacgctgtggcagaatgaggagagggctgccatgtcctctggcaagatctacgacatc
tggcaccgccgacacgactactggctgttggcaggaattgtcactcatggctatgcccgc
tggcaggacatccagaatgacccgcgctacgtgatcctgaatgagcccttcaagtcagag
atacacaaggggaactaccttgagatgaagaacaagttccttgctcggcgttttaagttg
ctggagcaggccctggtgatcgaggagcagctgaggagggcggcgtacctcaacatgacc
caagaccccagtcacccggccatggcactgaacgcgcggctggcagaagtggagtgcctt
gctgagagccaccagcacctctccaaagagtccctggctgggaacaagcctgccaacgct
gtcctgcacaaggtgctgaaccagcttgaggagctgctgagtgacatgaaggctgatgtg
acacgcttgccctccatgctgtcccgcatcccgcccgtggctgcccggctgcagatgtca
gagcggagcatcctcagccgcctggccacccgtggaggggatccagctgcccagggctcc
tttggctctgctccgatcttcaacaacaactttgggccaaatttccgtggtccggggcca
ggtgggattgtcaactacagccagatgcctctgggaccctacgtgactgatatttag
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integrated database retrieval system
