Vidua macroura (Pin-tailed whydah): 128818272
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Entry
128818272 CDS
T11570
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
vmc Vidua macroura (Pin-tailed whydah)
Pathway
vmc03013
Nucleocytoplasmic transport
vmc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128818272
03015 mRNA surveillance pathway
128818272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vmc03019
]
128818272
Enzymes [BR:
vmc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128818272
Messenger RNA biogenesis [BR:
vmc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
128818272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
128818272
NCBI-ProteinID:
XP_053853447
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Position
23:1482053..1494867
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AA seq
479 aa
AA seq
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MATDSWALAVDEQEAAAESLSTLHLKDEKTKPDANGAVVKADDNVEKTEDEEKEDRAAQS
LLNKLIRSNLVDTTNQVEVLQRDPTSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQE
NALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPGNKYPQCLCLSPTYELALQTGK
VIEQMGNFYPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFV
LDEADVMIATQGHQDQSIRIQRMLPRDCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKRE
EETLDTIKQYYVLCNNRDEKFRALCNIYGAITIAQAMIFCHTRKTAGWLAAELSREGHQV
ALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDN
ETYLHRIGRTGRFGKRGLAINMVDSKHSMNILNRIQEHFNKKINKLDTDDLDEIEKINN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgactcgtgggccctggccgtggacgagcaggaggcggcggccgagtcgttg
agcactttacacctgaaggatgaaaaaaccaaaccagatgccaatggtgccgttgtcaag
gcagatgacaatgtggagaagacggaggatgaggagaaggaggacagagctgcccagtcc
ttactgaacaagctgatccgcagtaacctggttgacaccacaaatcaggtggaggtgctg
cagagggaccccacatcacccctctactccgtcaagtctttcgaggagctgcgcctaaaa
ccacagctcctgcaaggagtctatgccatgggcttcaacagaccatctaagatccaagag
aacgccctgcccatgatgcttgctgaacccccgcagaacctcatcgcgcagtcgcagtcc
ggtactggcaagaccgctgcctttgtcctggccatgctcagcagggttgagcctgggaac
aagtatccacagtgtttgtgcctttccccaacatatgagctggcacttcaaacaggaaaa
gtgattgagcagatgggaaacttttacccggagctgaaacttgcgtatgctgtccgaggc
aacaaactggagagagggcagaagatctcggagcagatcgtaatcggcacacctggcacc
gtgctggactggtgctccaaactgaaattcatagatcccaagaagatcaaggtgttcgtg
ttggatgaggcagatgtgatgatcgccacccagggccaccaggaccagagcatccgcatt
cagagaatgctccccagggactgccagatgctcttgttttcagccacttttgaggattct
gtgtggaagtttgctcaaaaagttgttcctgacccgaacattatcaaactgaagcgtgag
gaggagaccctggacaccatcaagcagtattatgttctgtgcaacaacagagatgagaag
ttccgggctctctgtaacatctacggcgccatcaccatcgcccaggctatgatcttctgc
catactcggaagacagcagggtggctggcggcggagctgtcccgggagggccatcaggtg
gccttgctcagcggggagatgatggtggagcagagagctgctgtgatcgagcgctttcgg
gagggcaaggagaaggtgctggtgaccacaaacgtctgtgccagagggatcgatgtagag
caggtctctgttgttatcaattttgacctgcctgtggataaggatggaaatccagacaac
gagacctacctgcaccgcatcggccgcaccggccgctttggcaagcgagggctggccatt
aacatggtggacagcaagcacagcatgaacattctcaacagaatccaggaacatttcaac
aaaaagataaacaaattggatactgacgacttggatgaaattgagaagataaataactga
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