Vidua macroura (Pin-tailed whydah): 128818366
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Entry
128818366 CDS
T11570
Symbol
YBX1
Name
(RefSeq) Y-box-binding protein 1 isoform X1
KO
K09276
Y-box-binding protein 1
Organism
vmc Vidua macroura (Pin-tailed whydah)
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vmc03000
]
128818366 (YBX1)
03019 Messenger RNA biogenesis [BR:
vmc03019
]
128818366 (YBX1)
03041 Spliceosome [BR:
vmc03041
]
128818366 (YBX1)
Transcription factors [BR:
vmc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
128818366 (YBX1)
Messenger RNA biogenesis [BR:
vmc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
128818366 (YBX1)
mRNA cycle factors
Common to processing body (P body) and stress granule
128818366 (YBX1)
Spliceosome [BR:
vmc03041
]
Common components
Common spliceosomal components
General mRNP proteins
128818366 (YBX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSD
OB_RNB
DUF8529
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
128818366
NCBI-ProteinID:
XP_053853612
LinkDB
All DBs
Position
23:562630..572053
Genome browser
AA seq
324 aa
AA seq
DB search
MSSEAETQPPAAPVPAAAPAAPADSKPNGGTGNGGSGLASAAPPAGGDKKVIATKVLGTV
KWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAA
NVTGPGGVPVQGSKYAADRNHYRRYPRRRGPPRNYQQNYQNSESGEKNEGAENIPEGQAQ
QRRPYRRRRYPPYYMRRPYGRRPQYTNPPVQGEIVEGADNQGAGDGRPVRQNMYRGYRPR
FRSLTFRGPPRQRQPREDGNEEDKENQGDETQSQQPPQRRYRRNFNYRRRRPENPKPQDG
KETKTAEPPAENTSAPEAEQGGAE
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgaggccgagacccagccacccgccgcccccgtccccgcggcggcccccgcc
gcccccgccgactccaagccaaacggtgggaccgggaacgggggcagcggcctggcctcg
gcggcgcctcccgctggcggggacaagaaggtcatcgcaacgaaggttttgggaacagtg
aaatggttcaacgtgaggaacggttacggcttcatcaacaggaatgacaccaaggaagat
gtgtttgtccatcagactgccataaagaagaataaccccaggaagtacctccgcagcgta
ggagatggagagaccgtggagtttgatgtggttgagggagaaaagggtgcggaggcagcc
aatgtcacaggacctggtggagttccagtgcagggcagtaaatacgcagcagatcgtaac
cattacagacgatatccacgtcgtaggggtcctccacgcaactatcagcagaactaccag
aacagtgagagtggggaaaagaacgaaggagcagagaacataccagaaggtcaagcccag
caacgccgtccctatcgcagacggcggtacccaccttactatatgcgtaggccctacggg
cgtcgtccacaatataccaaccctcctgtacagggagagatagtggagggtgctgacaac
cagggtgcaggagatggcagaccagtcaggcaaaacatgtaccggggttacagaccaaga
tttcgcagcttgactttcaggggtcctcctcgtcaaagacagcctagagaggatggaaat
gaagaagataaagagaaccaaggggatgaaacccaaagtcagcagccacctcaacgtcgg
taccgccgtaatttcaactaccgacgcagacgcccagagaaccctaaaccacaagatggc
aaagagacgaagacagccgaaccaccagctgagaacacgtccgctcccgaggctgagcag
ggcggggctgagtaa
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integrated database retrieval system
