Vidua macroura (Pin-tailed whydah): 128818608
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Entry
128818608 CDS
T11570
Symbol
NFASC
Name
(RefSeq) neurofascin isoform X1
KO
K06757
neurofascin
Organism
vmc Vidua macroura (Pin-tailed whydah)
Pathway
vmc04514
Cell adhesion molecule (CAM) interaction
vmc04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
128818608 (NFASC)
04517 IgSF CAM signaling
128818608 (NFASC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
vmc04515
]
128818608 (NFASC)
Cell adhesion molecules [BR:
vmc04515
]
Immunoglobulin superfamily
L1 family
128818608 (NFASC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Bravo_FIGEY
Ig_VEGFR-1-like_5th
V-set
FN3_DSCAM-DSCAML_C
C2-set_2
Ig_PDGFR_d4
Ig_5
BiPBP_C
DUF4293
Motif
Other DBs
NCBI-GeneID:
128818608
NCBI-ProteinID:
XP_053854061
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All DBs
Position
24:complement(4645912..4724031)
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AA seq
1380 aa
AA seq
DB search
MIPRRAQVTCAGIAFALCLQHLVSAIEVPLDLPQPPTITKQSIKDYIVDPRDNIFIECEA
KGNPVPTFSWTRNGKFFNVAKDPKVSMRRRSGTLVIDFHSGGRPDDYEGEYQCFARNDYG
TALSSKIHLQVSKSPLWPKEKVDVIEVDEGAPLSLQCNPPPGLPEPVIFWMSSSMEPIPQ
DKRVSQGHNGDLYFSNVLAQDALTDYSCNARFHFTHTIQQKNPYTLKVKTKKSHNETSLG
NSPAMYRARGITETTPSFMYPYGTSSSQMVLRGVDLLLECIASGVPAPDIMWYKKGGELP
VGKTKLENFNKALRISNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPENLIL
APGEDGRLVCRANGNPKPSIQWLVNGEPIEASPPNPSREVAGDTIVFRDTQIGSSAVYQC
NASNEHGYLLANAFVSVLDVPPRILGPRNQLIRVIQNNRTRLDCPFFGSPIPTLRWFKNG
QGNTLDGGNYKAHENGSLEMFMARKEDQGIYTCVATNILGKAEAQVRLEVKDPTRIVRGP
EDQVVKRGTMPRLHCRVKHDPTLRLMVTWLKDDAPLYLGSRMKKEEDGLTIYGVTEKDQG
DYTCVASTELDKDFAKAYLTVLAIPANRLRDLPKERPDRPRDLELTDLAERSVRLTWIPG
DDNNSPITDYIVQFEEDRFQPGMWHNHSRYPGSVNSAVLSLSPYVNYQFRVIAVNDVGSS
VPSLPSERYQTNGARPEINPTGVQGAGTQKNNMEITWTPLNATQAYGPNLRYIVRWRRRD
PRGSWYNETVRSARHVVWNTPIYVPYEIKVQAENDFGRAPEPDTYIGYSGEDYPKAAPTD
VRIRVLNSTAIALTWTRVHLDTIQGQLKEYRAYFWRDSSLLKNLWVSKKRQFVSFPGDRN
RGTVSRLFPYSNYKLEMVVTNGRGDGPRSEMKEFPTPEGVPSSPRYLRIRQPNLEIINLE
WDHPEHPNGIITGYTLRYQPFNGSRTGRTVVENLSPNQTRFTLQRSDPISRYRFVLRART
QVGEGDALVEESPALLDEATPSPEATGPPPTTVEETSPETSPETSPTISPETSPTISPET
SPAISPETSPTISPTISPTISPTISPTTIPTTTDTTTTTSTAASTAASTSAAAERAPAAT
TRHELAANGSSIWDIRAMANSNWANITWSHNFSAGTDFVVKYITSNKTEKSIPVKAQGPS
SVQLADLTPGMMYKLWVFPIWSHPSEHSYITFTTSSAYTKNQVDIATQGWFIGLMCAIAL
LVLILLIVCFIKRSRGGKYPVRDNKDEHLNPEDKNVEDGSFDYSDEDNKPLPNSQTSLDG
TIKQQESDDSLVDYGEGGEGQFNEDGSFIGQYTVKKDKEETEGNESSEATSPVNAIYSLA
NT seq
4143 nt
NT seq
+upstream
nt +downstream
nt
atgatcccaaggagagcccaggtcacctgcgccggaattgccttcgccctctgcctccag
cacctcgtcagcgccatcgaggtccccctggacttgccgcagccccccacgatcaccaag
caatccatcaaggattacatcgtggatcccagggataacatcttcatcgaatgcgaagcc
aaaggcaaccccgttcccaccttttcctggacgcggaacgggaagttcttcaacgtggcc
aaggatcccaaggtgtccatgaggaggagatcggggactttggtcatcgacttccacagc
gggggccggcccgacgactacgagggcgagtaccagtgctttgccaggaacgactacggg
acggccctttccagcaaaatccacctccaggtttccaagtctccgctgtggcccaaggaa
aaggtggatgtgatcgaggtggacgagggggccccgctgagcctgcagtgcaatcccccg
cccggcctccccgagcccgtcatcttctggatgagcagctccatggagccgatcccgcag
gacaagcgcgtgtcccagggccacaacggggacctttacttctccaacgtgctggcgcag
gacgcgctgaccgactacagctgcaacgcccgcttccacttcacccacaccatccagcag
aagaacccctacaccctcaaggtcaaaaccaagaagtcccataacgaaacgtctttagga
aattcccccgccatgtaccgcgcccgagggatcacggaaaccactcccagcttcatgtat
ccctacggcacttccagcagccagatggtgctccgaggggtggatctcctgctggaatgc
atcgcctctggagtaccagcgccggacatcatgtggtacaagaaaggtggggagctcccg
gtgggcaaaaccaagctggagaacttcaacaaggccctgcgcatctccaacgtgtccgag
gaggactccggggaatatttctgcctggcctccaacaagatgggcagcatccgccacacg
atctcggtgagagtgaaggctgctccctactggctggatgagccggagaacctgatcctg
gcccccggcgaggacggcaggctcgtgtgccgggccaacggcaaccccaaaccatccatc
cagtggctggtgaacggagagcccatcgaagcgtctccccccaacccgagccgggaggtg
gccggggacaccatcgtgttccgggacacgcagatcggcagcagcgccgtgtaccagtgc
aacgcgtccaacgagcacggctacctgctggccaacgccttcgtcagcgtgctggatgtt
cccccccggatcctgggcccccggaaccagctgatcagggtgatccagaacaacaggacg
cgcctggattgtcccttttttgggtcccccatccccaccctgcgctggtttaagaacggc
caggggaacacgctggatggaggcaactacaaagcccacgagaacgggagcttggagatg
ttcatggctcggaaggaggaccagggaatctacacctgcgtggccaccaacatcctgggg
aaagctgaggcccaggtccgcctggaggtcaaagaccccaccaggatcgtgaggggcccc
gaggaccaggtggtcaagaggggcaccatgccccggctccactgccgcgtcaagcacgac
cccacgctgcggctcatggtcacctggctcaaggacgatgcccccctgtacctgggcagc
aggatgaagaaggaagaggatggtctgacgatctatggcgtgactgagaaggaccagggc
gattacacgtgcgtggccagcacggagctggacaaggacttcgccaaggcctatctcact
gtgctggccatccccgctaatcggttgagagatttacccaaagagcgacctgaccggccc
cgggacttggagctgacggatctggccgagaggagcgtgcggctgacgtggatccctggc
gatgacaacaacagccccatcacagactacattgtccagtttgaggaggaccgcttccag
ccgggaatgtggcacaaccactccaggtaccccgggagcgtcaactcggccgtgctgagc
ctgtccccgtacgtgaattaccaattccgggtgatcgccgtcaacgacgtgggcagcagc
gtgcccagcctgccctccgagcgctaccagaccaacggggcacgtcctgaaataaatcca
acgggagttcaaggggcagggacccaaaaaaacaacatggagataacgtggacccctctg
aacgcaactcaggcttacgggcccaacctcaggtacatcgtgaggtggcggcggcgggac
ccccgcgggagctggtacaacgagaccgtgcggagcgcgcggcacgtggtgtggaacacc
cccatctacgtcccctacgagatcaaggtgcaggccgagaacgacttcggcagagccccg
gagcccgacacctacatcggatactccggggaggattatcccaaggctgcgcccacggat
gtcaggatcagagtcttaaacagcactgccatagctctgacctggacccgggtgcacctg
gacaccatccagggacagctcaaggagtaccgagcctatttctggagagacagcagcttg
ctgaagaacctgtgggtctccaaaaaacggcagtttgtgagttttcctggagaccgcaac
cggggcaccgtgtcccggctgttcccttacagcaactacaagctggagatggtggtcacc
aacggccgaggggacgggccccgcagcgaaatgaaggaattccccacccctgaaggagtg
cccagctcccccaggtacctgcggatccgacagcccaacctggaaatcatcaacctggag
tgggatcaccctgagcatcccaacgggatcatcacgggatacaccctccgataccagccc
tttaacgggtcgcggacgggccggacggtggtggagaacctgtcccccaaccagacgagg
ttcaccctgcagaggtcagaccccatctcccgctatcgcttcgtgctccgcgcccgcacc
caggtgggagagggagacgccctggtggaggagtcgccggcgctgctggacgaagccacg
ccaagcccagaggcaactgggccgcctccaaccacagtggaggaaaccagtcctgaaacc
agtcctgaaaccagtcctacaatcagtcctgaaaccagtcctacaatcagtcctgaaacc
agtcctgcaatcagtcctgaaaccagtcctacaatcagtcctacaatcagtcctacaatc
agtcctacaatcagtcctacaaccatcccaaccaccaccgacaccacaaccaccaccagc
accgccgccagcaccgccgccagcaccagcgccgctgccgagagggctccggcagccacc
accaggcacgagttggctgccaatggatcgtccatatgggacatcagagccatggcaaac
agtaactgggcaaacatcacctggagccacaatttctcggcaggaactgactttgtggtt
aagtatatcaccagtaacaagacagagaaatcaatccccgttaaggctcagggcccgtcc
tcggtgcagctggcggatctgacgccggggatgatgtacaagctgtgggtgttccccata
tggtcccaccccagcgagcactcgtacattacctttaccaccagctcagcctacaccaag
aaccaggtggacatcgccacgcagggctggttcatcggcctcatgtgcgccatcgccctc
ctggtgctcatcctcctcatcgtctgcttcatcaagaggagccgcggcgggaagtatcca
gtgcgggacaacaaggacgagcacctcaatcccgaggacaagaacgtggaggacggatcc
ttcgactacagcgatgaagacaacaaacctcttcccaacagccagacctcgctggacggg
acgataaagcagcaggagagcgacgacagcttggtggactacggagaagggggcgagggc
cagttcaacgaggatggctccttcatcggccagtacacggtcaagaaggacaaagaggag
accgagggcaatgagagctctgaggccacgtcccccgtcaatgccatttattccttggca
tag
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integrated database retrieval system