Vidua macroura (Pin-tailed whydah): 128818652
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Entry
128818652 CDS
T11570
Symbol
SNRPE
Name
(RefSeq) small nuclear ribonucleoprotein E
KO
K11097
small nuclear ribonucleoprotein E
Organism
vmc Vidua macroura (Pin-tailed whydah)
Pathway
vmc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128818652 (SNRPE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vmc03019
]
128818652 (SNRPE)
03041 Spliceosome [BR:
vmc03041
]
128818652 (SNRPE)
03032 DNA replication proteins [BR:
vmc03032
]
128818652 (SNRPE)
Messenger RNA biogenesis [BR:
vmc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
128818652 (SNRPE)
Spliceosome [BR:
vmc03041
]
Complex A
U1 snRNP components
Sm proteins
128818652 (SNRPE)
U2 snRNP components
128818652 (SNRPE)
Complex B
U1 snRNP components
128818652 (SNRPE)
U4/U6.U5 tri-snRNP components
128818652 (SNRPE)
Complex C
U2 snRNP components
128818652 (SNRPE)
DNA replication proteins [BR:
vmc03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
128818652 (SNRPE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
128818652
NCBI-ProteinID:
XP_053854164
LinkDB
All DBs
Position
24:complement(4957828..4961537)
Genome browser
AA seq
92 aa
AA seq
DB search
MAYRGQGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDD
AEEIHSKTKARKQLGRIMLKGDNITLLQSVSN
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atggcgtaccgcgggcagggccagaaggtgcagaaggtgatggtgcagcccatcaacctg
atcttccgctacctgcagaacagatcccggatccaggtgtggctctacgagcaggtgaac
atgaggatcgagggctgcatcatcggctttgatgagtacatgaacctggtgctggacgat
gctgaggagattcactccaaaaccaaggccaggaagcagctgggtcggatcatgctgaag
ggggacaacatcaccctcctgcagagcgtctccaattag
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