KEGG   Vidua macroura (Pin-tailed whydah): 128818683
Entry
128818683         CDS       T11570                                 
Symbol
BCAS2
Name
(RefSeq) pre-mRNA-splicing factor SPF27
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
vmc  Vidua macroura (Pin-tailed whydah)
Pathway
vmc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vmc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    128818683 (BCAS2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vmc03041]
    128818683 (BCAS2)
   03400 DNA repair and recombination proteins [BR:vmc03400]
    128818683 (BCAS2)
Spliceosome [BR:vmc03041]
 Complex B
  Other components
   Prp19 complex
    128818683 (BCAS2)
 Complex C
   Prp19-CDC5 complex
    128818683 (BCAS2)
DNA repair and recombination proteins [BR:vmc03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    128818683 (BCAS2)
SSDB
Motif
Pfam: BCAS2 THOC7 ZapB_rel CCDC113_CCDC96_CC INO80F YhjD SCRG1 Tup_N NOCA1_mid GAS DUF3450 Phlebovirus_NSM OmpH
Other DBs
NCBI-GeneID: 128818683
NCBI-ProteinID: XP_053854207
LinkDB
Position
24:3668465..3672048
AA seq 226 aa
MSGPGLVAGDVVVDALPYFDQGYEAPGVREAAAALVEEETRRYRPTKNYLSYLPAHDYSA
FETEIMRNEFERLAARQPLELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVR
IENLELMSQHGCNAWKVYNEHLVHMIEQAQKELQKLRKNIQDLNWQRKNMQLTAGAKLRE
MESTWVSLVSKNYEIERTIVQLENEISQIKQQHGEANKENIQQDFQ
NT seq 681 nt   +upstreamnt  +downstreamnt
atgtcgggcccggggctggtggccggggatgtcgtggtggatgcgctgccctacttcgac
cagggctacgaggcgccgggcgtgcgggaggcggccgcggcgctggtggaggaggagacg
cggcgataccggccgaccaagaactacctgagctacctgcccgcgcacgactacagcgcc
ttcgagaccgagatcatgcggaacgagttcgagcgcctggcggcccggcagcccctggag
ctgctcagtatgaagaggtacgagctgcccgccccctcctccgggcagaagaacgacatc
acggcgtggcaggagtgtgtgaacaactccatggcacagctggagcaccaggccgtgcgc
atcgagaacctggagctcatgtcccagcacggctgcaatgcctggaaggtgtacaacgag
cacctggttcatatgatagaacaagcccagaaagagcttcagaaattgaggaaaaacatt
caagacctgaactggcagaggaagaacatgcagctcacagctggggctaagctgagagag
atggaatccacgtgggtctctcttgtcagtaaaaattatgagattgaacgaactattgtg
cagctggaaaatgaaatttcacaaatcaagcagcagcatggggaagcaaacaaggagaat
atccagcaagactttcagtga

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