Vidua macroura (Pin-tailed whydah): 128818703
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Entry
128818703 CDS
T11570
Symbol
CACNA1S
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1S
KO
K04857
voltage-dependent calcium channel L type alpha-1S
Organism
vmc Vidua macroura (Pin-tailed whydah)
Pathway
vmc04010
MAPK signaling pathway
vmc04020
Calcium signaling pathway
vmc04260
Cardiac muscle contraction
vmc04261
Adrenergic signaling in cardiomyocytes
vmc04270
Vascular smooth muscle contraction
vmc04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128818703 (CACNA1S)
04020 Calcium signaling pathway
128818703 (CACNA1S)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
128818703 (CACNA1S)
09153 Circulatory system
04260 Cardiac muscle contraction
128818703 (CACNA1S)
04261 Adrenergic signaling in cardiomyocytes
128818703 (CACNA1S)
04270 Vascular smooth muscle contraction
128818703 (CACNA1S)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vmc04040
]
128818703 (CACNA1S)
Ion channels [BR:
vmc04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
128818703 (CACNA1S)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
CAC1F_C
Motif
Other DBs
NCBI-GeneID:
128818703
NCBI-ProteinID:
XP_053854236
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All DBs
Position
24:complement(2569324..2624681)
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AA seq
1845 aa
AA seq
DB search
MEPSSPQGDVKKRQQKEKSKKPVPPIAPRPPRALFCLTLENPLRKACISIVEWKPFEIII
LLTIFANCVALAIYLPMPEDDTNIANSSLEKIEYAFLIFFAIEAMLKIIAYGFLFHTDAY
LRNGWNVLDFSIVTLGLITMTLEQVNVKQAGPSGGKGGFDVKALRAFRVLRPLRLVSGVP
SLQVVLNSIIKAMVPLLHIALLVLFMIIIYAIVGQELFKGRMHKTCYYLGTDVIATVGSE
KPAPCTSSGHGRHCSINGSECRGGWPGPNNGITHFDNFGFAMLTVYQCITMEGWTEVLYW
VNDAMGNEWPWIYFVSLILLGSFFVLNLVLGVLSGEFTKEREKAKSRGTFQKLREKQQLE
EDLKGYMDWITHAEVMDSDRARGEGMMPSDEGGSETESLYEIEGMNKWILFFRQWRRWNR
MFRRKCRDVVKSKFFYWLVILMVALNTLSIASEHHFQPEWLTRVQDNANRLLLALFVAEM
LLKMYALGLRQYFMSLFNRFDCFVVCSGILETILVELGTLSPLGISVLRCIRLLRIFKIT
RYWTSLSNLVASLLNSVRSIASLLLLLFLFIIVFALLGMQLFGGKFDFEDMKVRRSTFDN
FPQALISVFQILTGEDWNSIMYDGIMAYGGPSFPGMLVCIYFIILFVCGNYILLNVFLAI
AVDNLAEAESLTLAQKAKAEERKRRKMSRGYPEKTEEEKQMLAKKLEQKVKGEGIPTTAK
LKVDEFESNVNEIKDPYPSADFPGDDEEDEPEIPLSPRPRPLAELQLKEKAVPMPEASSF
FIFSPTNKFRVLCHRTVNATWFTNFILLFILLSSISLAAEDPIRAESFRNQILGYFDIGF
TSVFTVEIVLKMTTYGAFLHKGSFCRNSFNILDLLVVAVSLISMGFESSTISVVKILRVL
RVLRPLRAINRAKGLKHVVQCVFVAIKTIGNIVVVTTLLQFMFACIGVQLFKGKFYRCTD
PSKLTEKECRGQFINYVDADPTQIEVQDRVWLHSDFHFNNVFSAMMSLFTVSTFEGWPEL
LYMAIDTNAEDAGPIYNYRVEIAMFFIIYIILIAFFMMNIFVGFVIVTFQEQGENEYKNC
ELDKNQRQCVQYALKARPLRRYIPKNPYQYQIWYVVTSSYFEYLMFFLILLNTICLGMQH
YNQSAEMNHISDILNVAFTILFTLEMVLKLMAFKAKGYFGDPWNVFDFLIVIGSIIDVIL
SEIDTILAPSGGLYCLGGGCDGTDSDDNSRVSITFFRLFRVMRLVKLLSRGEGVRTLLWT
FIKSFQALPYVALLIVMLFFIYAVIGMQMFGKIAMVDGTQINRNNNFQTFPQAVLLLFRC
ATGEAWQEILLDCSYGRRCDPESDYAEGEEYTCGTGFAYFYFISFYMLCAFLIINLFVAV
IMDNFDYLTRDWSILGPHHLDEFKRIWAEYDPEAKGRIKHLDVVTLLRRINPPLGFGKFC
PHRVACKRLVCMNMPLNSDGTVTFNATLFALVRTALKIKTEGNFEQANEELRAIIKKIWK
RTSMKLLDQVIPPIGDDEVTVGKFYATFLIQEHFRKFMKRQEEYYGYRPKKNPVEIQAGL
RSIEEEAAPEIHRAISGDLTAEEELERAMVEAALEEGIYRRTGGLFGQVDSFMEPSSPLQ
PQVASQRPLQFTEVGSEDLDSPVFLDDFPQEGNTNINNANSSSWLQGVQYEDEVLRRTLP
AARRRPAWEHNRPIPMERLSRRRGAHSGGLSSPGPLLPQQLSTEDGTMAGTASSSRFQQR
ETGEPGTSSTPAITFLIQEALISGGLGALAQDSSFLAVTRDEMAASSQLEMDEVEKAAVE
LLKGRETLQGTKTCSAPLDSSAVPPGRSAGLGAAPCQKSVTATRL
NT seq
5538 nt
NT seq
+upstream
nt +downstream
nt
atggagccctcttctccccagggtgacgtgaagaagaggcaacagaaggagaagtccaag
aagccggtaccaccaatagctcctcgtccacccagggctctgttctgcctaaccctggaa
aaccccctgcggaaggcgtgcatcagcatcgtggagtggaaacccttcgagatcatcatc
ctcctcaccatctttgccaactgtgttgctctggccatctacctgcccatgcccgaggat
gacaccaacatcgccaactccagcctggagaagatcgaatatgccttcctcatcttcttt
gccatcgaggccatgttgaagataattgcctatggctttctgttccacacggatgcctat
ctccgaaacggctggaacgtgctcgacttttccatcgtgactctagggctcatcaccatg
accctggagcaggtcaacgtgaagcaggcagggccttcggggggaaaaggcggctttgac
gtgaaggcgctgcgagcgttccgcgtgctgagacccctgcgcctggtgtccggagtgccg
agccttcaggttgtcctgaactccatcatcaaggccatggtgcccctgctccacatcgcc
ctgctggtgctcttcatgatcatcatttacgccatcgtggggcaggagctcttcaagggc
aggatgcacaagacctgctactacctcgggacagatgtgattgccacggtgggctccgag
aagccagccccgtgcaccagctcgggccacgggcggcactgcagcatcaacggcagcgag
tgccgcggcggctggcccgggcccaacaacggcatcacccacttcgacaacttcggcttt
gccatgctcaccgtctaccagtgcatcaccatggagggctggactgaggttctctactgg
gtaaatgatgccatggggaatgaatggccctggatctactttgtcagccttatcttactt
ggctccttctttgtgctcaacctggtgctgggggtgctcagtggggagttcaccaaggag
cgcgagaaggccaagtcgcggggcaccttccagaagctgcgggagaagcagcagctggag
gaggatctgaagggttacatggactggatcacccacgcagaggtcatggacagtgatcgg
gccaggggagaaggtatgatgccatcggatgaaggagggtcagagacagagagcttgtat
gaaattgagggcatgaacaagtggattctcttcttccgtcagtggaggcgttggaaccga
atgtttcgtaggaagtgcagggatgtggtgaagtccaagttcttctactggcttgtcatc
ctgatggtggcactgaacaccctctccatcgcctctgagcaccacttccagccagagtgg
ctgacacgggtgcaagacaatgccaaccggctgctgctcgccctctttgtggccgaaatg
ctgctgaagatgtacgcgctggggctgcgccagtacttcatgtcgctcttcaaccgcttc
gactgcttcgtggtgtgctcggggatcctggagaccatcctcgtggagctgggcaccttg
tcccctctgggcatctccgtgctgcgctgcatccgcctcctccgcatcttcaagatcacc
aggtactggacatctttgagcaacctggtggcctctctgctcaactcagtccgctccatt
gcctctctgctcctcctcctcttcctcttcatcatagtttttgccctgctgggcatgcag
ctctttgggggcaagtttgactttgaggacatgaaagtgcggcgcagcacgttcgacaac
tttccccaggccctcatcagtgtcttccagatcctgaccggagaggactggaattcaatc
atgtatgatgggatcatggcctacgggggcccatcctttcctggcatgctggtctgcatc
tacttcatcatcctctttgtctgtgggaactatatcctcctcaatgtgttcctggccatc
gcagtggataacctggccgaggctgagagcctgaccttggcccagaaggccaaagcagag
gagcgcaaacggaggaagatgtccagaggttacccagagaagactgaagaggagaagcag
atgctggcaaagaaactggagcagaaagtaaagggagaagggattcccacaacagccaag
ttgaaagtggacgaatttgaatccaatgtcaatgagatcaaagacccctacccttctgca
gacttcccaggtgatgatgaggaagatgagcctgaaatccccctgagtcctcggccacgt
ccccttgcagagctacagctgaaggagaaggccgtgcccatgcctgaagccagctcattc
ttcatcttcagcccaaccaacaagtttcgggtcctgtgccacagaactgttaatgccacc
tggttcaccaacttcatcctgctcttcatcctgctcagcagcatttccctggcagctgag
gatcccatccgggccgagtccttccgcaaccagattcttggatacttcgacattggtttc
acctctgtcttcacagttgaaatcgtcttgaagatgacaacctacggtgctttcctgcac
aaaggctccttctgcaggaactccttcaatatccttgacttactggtggtcgctgtctcc
ctcatctccatgggatttgagtccagtacgatctctgtggtgaagatcctgcgggtgctg
agggtgctgaggcctctgcgagccattaacagggcgaaggggctgaagcacgtggtccag
tgcgtgttcgtggccatcaagaccattggtaacattgtggttgtcacgacattgctgcag
ttcatgtttgcctgcatcggagttcagctcttcaagggcaagttctacaggtgcacagac
ccatccaagctgacggagaaggagtgcaggggtcagttcatcaactacgtggacgcagac
cccacgcagattgaggtgcaggaccgtgtctggctgcacagcgacttccacttcaacaac
gtcttctcagccatgatgtcgctcttcaccgtctccaccttcgagggctggcccgagctg
ctgtacatggccattgacaccaatgctgaggatgcaggccctatctacaactaccgggtg
gagattgcaatgttcttcatcatctacatcatcctcattgccttcttcatgatgaacatc
tttgtgggctttgtcatcgtcaccttccaggagcaaggggagaatgagtacaagaactgt
gagctggacaagaatcagcgccagtgcgtgcagtacgcgctgaaggctcgcccgctgcgc
cgctacatccccaagaacccctaccagtaccagatctggtacgtggtcacctcctcctac
ttcgagtacctcatgttcttcctgatcctgctgaacaccatctgcctgggcatgcagcat
tacaaccagtctgcagaaatgaaccacatctcagacatcctcaacgtggccttcaccatc
ctcttcaccctggagatggtcctcaagctcatggccttcaaagccaagggctacttcgga
gacccctggaatgtctttgacttcctcatagtgattggcagcatcattgatgtcatcctc
agcgagatcgacactattctggcacccagtggtggattgtactgcctcggcgggggctgc
gatggcactgactctgatgacaactcccgcgtctccatcacttttttccggctgttccgg
gtgatgcgtctggtgaagctgctgagccggggggaaggagtcaggaccctcctgtggacc
ttcatcaagtcctttcaggctctgccatacgtggccctgctgattgtgatgcttttcttc
atctatgctgtgattgggatgcagatgtttgggaagattgccatggtggatgggacccag
atcaaccgaaacaacaacttccagacctttccacaggctgtgctgctgctcttcaggtgt
gccaccggcgaggcgtggcaggagatcctgctggactgcagctacggccggcgctgtgac
cccgagtccgactatgctgagggagaggagtacacctgtggcactggctttgcctacttc
tacttcatcagcttctacatgctctgtgccttcctgatcattaacctcttcgtggctgtc
atcatggacaactttgactacctgacacgggactggtccatcctggggccccaccacctg
gacgagttcaagcggatctgggctgagtacgaccccgaggccaaggggagaatcaaacac
ctggatgtggtgactctgctgaggcgcatcaaccctcccctgggctttgggaagttctgc
ccacaccgtgtagcttgtaagcgcctggtgtgcatgaacatgcccctgaacagcgacggc
accgtcaccttcaacgccaccctctttgctctggtgaggacagccctcaagatcaagaca
gaaggtaattttgaacaggccaatgaggagctcagagctattatcaaaaaaatctggaag
cgaacaagtatgaagcttttggaccaggtcatcccacctattggagatgatgaggtgaca
gtgggcaaattctacgctactttcctgatccaagagcatttcaggaagttcatgaagcgc
caggaggagtattatgggtaccggcccaagaaaaaccctgtggagatccaggctgggctg
aggagcattgaagaagaagctgctcccgaaatccatcgggccatttctggggacttgact
gcagaggaggagctggaaagagccatggtggaggctgccctggaggaggggatatacagg
agaacaggtggcttgtttggccaggtggacagcttcatggagcccagcagcccgctgcag
ccccaggtggccagccagaggcccctgcagttcaccgaggtgggcagtgaggacctcgac
tctcctgtgttccttgatgacttcccccaggaaggcaacaccaacatcaacaacgccaac
agcagcagctggctgcagggggtgcagtatgaggatgaggtgctgaggaggacgctacca
gcggcacgcaggcgcccggcctgggagcacaaccgccccatacccatggagaggctgagc
aggaggcgaggggcccactctgggggtctctcatcaccagggccactcctcccccagcag
ctgtccacggaggatggcaccatggcaggaacagcatccagctcaaggttccagcagagg
gaaactggtgagccaggaacatcctccacccccgccatcaccttcctcattcaggaggct
ctcatctctggtggcctcggggctctggcccaggactcgtcgttcctagcagtgaccagg
gatgagatggcagccagcagccagctggagatggatgaagtggagaaagcagccgtggag
ctgctaaagggaagagaaacactgcagggcacaaaaacttgctctgcccctctggacagc
tcagccgtgccaccaggcagatccgcagggctcggtgcagctccctgccagaagagcgtc
actgccactcgcctctga
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