KEGG   Vidua macroura (Pin-tailed whydah): 128819707
Entry
128819707         CDS       T11570                                 
Symbol
RAB5C
Name
(RefSeq) ras-related protein Rab-5C
  KO
K07889  Ras-related protein Rab-5C
Organism
vmc  Vidua macroura (Pin-tailed whydah)
Pathway
vmc04137  Mitophagy - animal
vmc04144  Endocytosis
vmc04145  Phagosome
vmc04148  Efferocytosis
vmc05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:vmc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    128819707 (RAB5C)
   04145 Phagosome
    128819707 (RAB5C)
   04137 Mitophagy - animal
    128819707 (RAB5C)
   04148 Efferocytosis
    128819707 (RAB5C)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    128819707 (RAB5C)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:vmc04131]
    128819707 (RAB5C)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vmc04147]
    128819707 (RAB5C)
   04031 GTP-binding proteins [BR:vmc04031]
    128819707 (RAB5C)
Membrane trafficking [BR:vmc04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    128819707 (RAB5C)
 Endosome - Lysosome transport
    128819707 (RAB5C)
Exosome [BR:vmc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   128819707 (RAB5C)
  Exosomal proteins of other body fluids (saliva and urine)
   128819707 (RAB5C)
  Exosomal proteins of colorectal cancer cells
   128819707 (RAB5C)
  Exosomal proteins of bladder cancer cells
   128819707 (RAB5C)
GTP-binding proteins [BR:vmc04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    128819707 (RAB5C)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA RsgA_GTPase AAA_16
Other DBs
NCBI-GeneID: 128819707
NCBI-ProteinID: XP_053855927
LinkDB
Position
27:293441..305426
AA seq 216 aa
MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFVRAKNWVKELQ
RQASPNIVIALAGNKADLANKRAVDFQDAQTYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPQNAPGGPGRNRVVDLQESSQPSRSQCCSN
NT seq 651 nt   +upstreamnt  +downstreamnt
atggcaggtcgaggtggagctgcccgaccgaatggaccagctgctgggaacaaaatctgc
cagtttaaacttgttctcttgggcgagtcagcggtggggaagtccagcctggtcctgcgc
tttgtgaaggggcagttccacgaataccaggagagcacaattggagctgccttcctaaca
cagacagtgtgtctggatgacacaacagtgaagtttgagatctgggacacggcggggcag
gagcgataccacagcctggcccccatgtactaccggggggctcaggcagccatcgtggtc
tacgacatcaccaacacagacacatttgtacgagccaagaactgggtgaaagagttgcag
aggcaggctagccccaatattgtaattgcactagcaggaaacaaggcagaccttgctaac
aagagagctgtggacttccaggatgcacagacatatgcagatgacaacagcttgctgttc
atggagacatcagcaaagacagcgatgaatgtgaatgaaatcttcatggcaatagccaag
aaactgccaaaaaatgaaccccagaatgctcctggtggcccaggcaggaatcgggtggtg
gaccttcaggagagcagccagccgagcagaagccagtgctgcagcaactga

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