Vidua macroura (Pin-tailed whydah): 128820005
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Entry
128820005 CDS
T11570
Symbol
RAB11FIP1
Name
(RefSeq) rab11 family-interacting protein 1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
vmc Vidua macroura (Pin-tailed whydah)
Pathway
vmc04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
vmc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128820005 (RAB11FIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vmc04131
]
128820005 (RAB11FIP1)
Membrane trafficking [BR:
vmc04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
128820005 (RAB11FIP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
128820005
NCBI-ProteinID:
XP_053856447
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All DBs
Position
28:800023..810452
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AA seq
1380 aa
AA seq
DB search
MAGAAAGWAPTHVRVTVLRARGLRAKAAAGGSDAYAVMALGRDKFRTSVAERCRGEPLWR
EEATFELPARPAALRLTVLHRALAGADKFLGRAEVELAALRDDGGRRHTRWYKLRSKPGK
KEKERGEIEVDIQFMRSNMTASMFDLSMKDKPRSPFGKLKDKLKGKRSSGLSDTASEIVP
STSHSPADSEDEAVEKEKKKSKFKALFSKPGLQKTSLSQSMSVLPTQQPLTQRVRLRPSD
FQAQWDEEEPQTSPASERSFESVPEQKPAPSPLFKSRKPAFLDSRQLTQGTTNHTKKDGL
SLFSGLKSKSDPVSKSSLCINGSHIYMEETTTKDKTPTSSPSPHNLRRKQLFASEENLSS
RPTKSPEEMGRTAPGQAFSGSTSLETFKSMTLPSYKLLSSEEHLDTSIPPSVEAVRETKK
PEHKKSALLSLVTGKKETVKPSDAEIIPDRTLQSEENTIPEEKSEEEAKCPEAPANVGRG
SPSGDAQHAEEAVTTKQLLSPCEEERKAEKAAPAKTKAVKPRLGLSPEEEPKATLPTLAP
DPLPAFLSVHRISSANNPFISEVGQTVQVPDSENITSSPASLTSAFAAELWNDKNPFTPE
RDRASRALDPNSITRFPSSHHPAASVPKVLLPGQVSARGNNPFAADWGQGPEGSEASRGL
SGPHTPSVPSGCPFSDNNPFVSKRGGRAVPGSQAGSSLSCLPGGEGCSSAGHPARGASGG
SADVALNRDVTAVPDPLGTLSDPPSGPPALAPEPHRDSARLQPEDSLESSKPGRGRSVSF
VLGEWQGVPSGDAGLAGQEGGEQPLDSSGRLQVGSGAAGERAGFGGELGEGGDPSTELSV
DSTHPTWNSDGTAVEVTGVSTEPCTRGDKGFVSLSKCSDSLVPEADQAPESELREEQETC
GGKQWAERVPVLEPQAPPPAGNEPLPQVQPTPRACTVSPGEGEPGRAGSEVLVPPKPAPR
LAVLLRESPASPQAELRGDVPASGDGAKSTPGLPEGSAARGYLPQGGSLEAVAPAVTPRG
KSSGRPLEKEGGDLCVTLTNVRSAIPVPGDRGSALAALPVIPEGGSDDELLGDCQVSCGA
TAGDRGVLGNGEQPRGVTPLHGEQGELSESSAAAPVIPAAPGGGAGAIPGACEPGGSAVL
PAAVGAPRLCVQGADPGLGVTPHSRECDSHFGKQELERSAGAEECAECDFSEPSAFSSSL
SSPCQPHSSSHSLLPDTPSRRAESPKKPTAEGFADKAGNSGKKKLLQARVSPSETFPNQT
PRGAAETVSPKHRLHPVKPMNAMANKPQSKNLNVISTMNEKLLEMSVKKYDPSDPAYAYA
QLTHDELIQLVLKQKDTITRKDLQVRELEDYIDNLLVRVMEETPNILRVSMAGNKKAGKM
NT seq
4143 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcggccgcgggctgggcgcccacccacgtgcgggtgacggtgctgcgggcg
cgggggctgcgcgccaaggcggcggcgggcggcagcgacgcgtacgcggtgatggcgctg
ggccgcgacaagttccgcacgtcggtggccgagcggtgccggggcgagccgctgtggcgg
gaggaggccacgttcgagctgccggcgcggcccgccgcgctgcgcctcacggtgctgcac
cgcgccctggccggcgccgacaagttcctgggccgcgccgaggtggagctggccgcgctc
agggacgacggcggccggcggcacacgaggtggtacaagcttcgctccaaaccagggaag
aaggagaaagagagaggggagattgaggtggatatccagttcatgaggagcaacatgaca
gccagcatgtttgacctgtccatgaaggacaagccccgctctccctttgggaagctcaaa
gacaagctcaagggcaagaggagcagcggcctctcggacacggcgtcggagatcgtcccc
agcacctcccactcccctgctgacagcgaggatgaggcagtggagaaggagaagaagaaa
tccaagttcaaagcgctgttctccaagcccggcctgcagaagacgtccctgtcccagtcc
atgtcagtgctgcccactcagcagcccctcacccagagggttcggctgcggcccagcgac
ttccaggcgcagtgggatgaggaggagccccagacctctcctgcctcagaacgatccttt
gaaagtgtgccggaacagaagccagctccttctcctctgtttaaatctcgtaaaccagcc
tttttggacagtaggcagctaacccaaggaaccactaaccacaccaaaaaggatgggctc
tctttgttcagtggccttaaatccaaaagcgatcccgtgtccaagtctagtctgtgcatc
aatggcagtcacatctatatggaagagaccacgacgaaggacaagactccaacctcttcc
ccctctcctcacaacctcaggaggaagcagctctttgcttcagaggagaacctgtcctcc
aggcccactaaatcacctgaagagatggggagaaccgctcctgggcaggctttctctggc
tccacatccttggagaccttcaagtccatgactttgccatcatacaaactgctcagcagt
gaggagcacctggacaccagcattccaccaagcgtcgaggctgttagagagaccaaaaaa
ccagagcacaaaaagtctgccttgctctccctggtcactgggaagaaggaaacggtgaag
cccagcgatgctgagattattcccgacaggaccctgcagagtgaggaaaacacaattcca
gaagagaagagcgaagaggaggccaaatgccccgaagccccagcaaatgtgggcagaggg
agcccgtcaggagacgctcagcacgcggaggaggccgtcacaaccaagcagctgctcagc
ccttgtgaggaggaacggaaagccgagaaagctgcaccagccaagaccaaagctgtgaaa
cccagactgggcctgtctccagaggaggaacccaaagccacgcttcctactcttgcacct
gaccccctccctgcttttctctctgtgcaccgtatcagcagtgccaataatccttttatt
tctgaagtggggcagacagtccaagtgccagactctgaaaacatcactagttctcctgcc
tctctcacttctgcttttgctgcagagctctggaatgacaagaacccctttactcctgag
agggacagggcatccagagccctggatcccaacagcatcacccgtttcccttcatcccat
catcctgcagcctctgttcccaaagtgcttcttcctgggcaggtctctgccaggggaaat
aatccttttgctgctgactgggggcagggtcctgagggctctgaggcttcccggggtctc
tctggcccacacacaccttctgtcccctctggctgtcctttcagtgacaacaatcccttc
gtgtccaagcgtgggggacgggcagtgccaggttcccaggctggttcttccctttcctgc
ctgcctggtggggagggctgttcctctgcaggacaccctgctcgtggtgcttcggggggc
tctgcagatgtggctttaaacagagatgtcacagctgtgccagaccctctgggcaccttg
tctgaccccccttctggcccccctgcgctggctccagagccacaccgggattctgctcgg
cttcagcctgaggattccttggaaagcagcaagccaggccgtgggagatctgtgtccttt
gtccttggggaatggcagggtgttccatcaggtgatgcaggcttggctgggcaggaaggt
ggagagcagcccctggattccagtgggaggttacaggtgggttcaggggcagcaggagag
cgagcagggtttgggggtgagctgggagaagggggtgacccatcgacagagctctctgtg
gacagcacacatcccacctggaacagtgacggaacagctgtggaggtcactggtgtgagc
actgagccctgcacgaggggtgacaaaggctttgtgtctctctccaagtgcagtgacagc
ctcgtgccagaggctgaccaggcacctgagagcgagctcagggaggagcaggagacctgt
ggtggaaagcagtgggcagaacgtgtgcccgtgttagagccccaggcacctccacctgct
ggaaacgagccgcttcctcaagtccagccaacgccgagagcctgcacggtgtcccctggg
gaaggggagccagggagggctggcagcgaggtccttgtccccccaaagccagccccacga
ctggctgtactgctgagggagtccccagcaagtccccaggctgagctaaggggtgatgtt
cctgcgtcaggggacggtgcaaaatccaccccagggctccctgaaggctcagctgctcgt
gggtacctccctcaagggggctccttggaggctgtggcccctgcagtgacacccagaggt
aagagcagtggcaggcctttagaaaaggaaggtggtgatttatgtgtcactctcacaaat
gtcaggtctgccattcctgttcccggcgaccggggctcggcactggccgctcttcccgtg
atcccggagggaggctccgatgacgagctgctgggggactgccaggtcagctgtggggcc
actgcaggtgacagaggtgttctggggaatggagagcagcctcgaggtgtgacacctttg
catggagaacagggagagctctctgagagctctgctgcggccccggtgatcccggctgct
ccgggaggaggagcaggagccattcctggtgcttgtgagccagggggttcggctgtgctg
ccagctgcagtgggtgctcccaggctctgtgtccagggagctgacccaggcttaggtgtg
acacctcattccagggagtgtgacagtcattttgggaaacaagagctggaaaggagtgca
ggtgctgaggagtgtgcagagtgtgacttctctgagccttctgctttctcttcctccctg
tcaagtccttgccagccccactcttcctctcattcccttctccctgacaccccgagtcgt
agagcagagtctccgaaaaagccaacagccgagggcttcgcagataaagcgggaaattcg
ggcaagaagaaacttctccaggcacgggtttcaccctctgaaacgttccctaaccaaacc
ccacggggtgctgctgaaaccgtgtctcccaagcacagactccatcctgtgaagccaatg
aatgccatggcaaacaagcctcagagcaagaacttgaatgtcatcagcaccatgaatgaa
aagctgctggaaatgagtgtgaagaaatacgatccctcagacccggcctatgcctatgct
cagctgacacacgatgagctgatccagctggtgctgaaacagaaggataccattaccagg
aaggacctccaggtgcgggagctcgaggactacatcgacaacctgcttgtcagagtcatg
gaggaaaccccaaacatcctccgcgtgtccatggctggcaacaaaaaagctgggaagatg
tga
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